RNA–Protein interactions for RNA: ENST00000606055.1

LINC00458-204, long intergenic non-protein coding RNA 458, humanhuman

TSL 3

Gene LINC00458, Length 425 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-204ENST00000606055 RAPGEF2Q9Y4G8 1499 aa11.85□□□□□ -0.51
LINC00458-204ENST00000606055 KIF21BO75037 1637 aa11.84□□□□□ -0.51
LINC00458-204ENST00000606055 SHROOM2Q13796 1616 aa11.83□□□□□ -0.52
LINC00458-204ENST00000606055 CTTNBP2Q8WZ74 1663 aa11.81□□□□□ -0.52
LINC00458-204ENST00000606055 ARAP1Q96P48 1450 aa11.78□□□□□ -0.52
LINC00458-204ENST00000606055 GOLGA3Q08378 1498 aa11.77□□□□□ -0.52
LINC00458-204ENST00000606055 KIAA0586Q9BVV6 1533 aa11.77□□□□□ -0.52
LINC00458-204ENST00000606055 IQGAP2Q13576 1575 aa11.76□□□□□ -0.53
LINC00458-204ENST00000606055 ERCC6L2Q5T890 1561 aa11.75□□□□□ -0.53
LINC00458-204ENST00000606055 CYB5RLQ6IPT4 315 aa11.75□□□□□ -0.53
LINC00458-204ENST00000606055 PRG4Q92954 1404 aaPredicted RBP11.73□□□□□ -0.53
LINC00458-204ENST00000606055 JPH4Q96JJ6 628 aa11.73□□□□□ -0.53
LINC00458-204ENST00000606055 TNIKQ9UKE5 1360 aa11.7□□□□□ -0.54
LINC00458-204ENST00000606055 FAM9AQ8IZU1 332 aaPredicted RBP11.7□□□□□ -0.54
LINC00458-204ENST00000606055 AEBP2Q6ZN18 517 aaPredicted RBP11.68□□□□□ -0.54
LINC00458-204ENST00000606055 CARMIL2Q6F5E8 1435 aa11.68□□□□□ -0.54
LINC00458-204ENST00000606055 UGGT2Q9NYU1 1516 aa11.67□□□□□ -0.54
LINC00458-204ENST00000606055 KIAA0556O60303 1618 aa11.64□□□□□ -0.55
LINC00458-204ENST00000606055 UBTFP17480 764 aaKnown RBP11.63□□□□□ -0.55
LINC00458-204ENST00000606055 EFCAB5A4FU69 1503 aa11.63□□□□□ -0.55
LINC00458-204ENST00000606055 DISP1Q96F81 1524 aa11.61□□□□□ -0.55
LINC00458-204ENST00000606055 ADCY10Q96PN6 1610 aa11.6□□□□□ -0.55
LINC00458-204ENST00000606055 PTPRGP23470 1445 aa11.59□□□□□ -0.55
LINC00458-204ENST00000606055 TTBK1Q5TCY1 1321 aaPredicted RBP11.59□□□□□ -0.55
LINC00458-204ENST00000606055 SAMD9Q5K651 1589 aa11.58□□□□□ -0.55
LINC00458-204ENST00000606055 TRHP20396 242 aaPredicted RBP11.57□□□□□ -0.56
LINC00458-204ENST00000606055 NPM1P06748 294 aaKnown RBP eCLIP11.55□□□□□ -0.56
LINC00458-204ENST00000606055 KIF13AQ9H1H9 1805 aa11.55□□□□□ -0.56
LINC00458-204ENST00000606055 CLIP1P30622 1438 aa11.54□□□□□ -0.56
LINC00458-204ENST00000606055 CEP162Q5TB80 1403 aa11.54□□□□□ -0.56
LINC00458-204ENST00000606055 EHMT2Q96KQ7 1210 aa11.54□□□□□ -0.56
LINC00458-204ENST00000606055 LOC105371045A0A1W2PR82 267 aa11.53□□□□□ -0.56
LINC00458-204ENST00000606055 ABCC2Q92887 1545 aa11.53□□□□□ -0.56
LINC00458-204ENST00000606055 UACAQ9BZF9 1416 aa11.52□□□□□ -0.56
LINC00458-204ENST00000606055 ARHGAP35Q9NRY4 1499 aa11.52□□□□□ -0.56
LINC00458-204ENST00000606055 FMN1Q68DA7 1419 aa11.52□□□□□ -0.57
LINC00458-204ENST00000606055 UHRF1BP1LA0JNW5 1464 aa11.51□□□□□ -0.57
LINC00458-204ENST00000606055 MAPKBP1O60336 1514 aa11.51□□□□□ -0.57
LINC00458-204ENST00000606055 RANGAP1P46060 587 aaPredicted RBP11.51□□□□□ -0.57
LINC00458-204ENST00000606055 ZCCHC11Q5TAX3 1644 aaKnown RBP11.5□□□□□ -0.57
LINC00458-204ENST00000606055 P3H3Q8IVL6 736 aa11.49□□□□□ -0.57
LINC00458-204ENST00000606055 ABCA8O94911 1581 aa11.49□□□□□ -0.57
LINC00458-204ENST00000606055 RAPGEF6Q8TEU7 1601 aa11.48□□□□□ -0.57
LINC00458-204ENST00000606055 TSPOAP1O95153 1857 aa11.48□□□□□ -0.57
LINC00458-204ENST00000606055 PLB1Q6P1J6 1458 aa11.47□□□□□ -0.57
LINC00458-204ENST00000606055 DIP2BQ9P265 1576 aa11.45□□□□□ -0.58
LINC00458-204ENST00000606055 KDM5BQ9UGL1 1544 aa11.45□□□□□ -0.58
LINC00458-204ENST00000606055 FHOD3Q2V2M9 1422 aa11.45□□□□□ -0.58
LINC00458-204ENST00000606055 VPS8Q8N3P4 1428 aa11.43□□□□□ -0.58
LINC00458-204ENST00000606055 CASKIN1Q8WXD9 1431 aa11.43□□□□□ -0.58
LINC00458-204ENST00000606055 ABCC10Q5T3U5 1492 aa11.43□□□□□ -0.58
LINC00458-204ENST00000606055 FYCO1Q9BQS8 1478 aa11.43□□□□□ -0.58
LINC00458-204ENST00000606055 ASXL2Q76L83 1435 aa11.42□□□□□ -0.58
LINC00458-204ENST00000606055 MAP3K1Q13233 1512 aa11.4□□□□□ -0.58
LINC00458-204ENST00000606055 FAM69CQ0P6D2 419 aa11.4□□□□□ -0.58
LINC00458-204ENST00000606055 HECW1Q76N89 1606 aa11.38□□□□□ -0.59
LINC00458-204ENST00000606055 GLI2P10070 1586 aa11.38□□□□□ -0.59
LINC00458-204ENST00000606055 CCDC18Q5T9S5 1454 aa11.38□□□□□ -0.59
LINC00458-204ENST00000606055 WDR7Q9Y4E6 1490 aa11.38□□□□□ -0.59
LINC00458-204ENST00000606055 CFAP43Q8NDM7 1665 aa11.37□□□□□ -0.59
LINC00458-204ENST00000606055 MAP3K4Q9Y6R4 1608 aa11.36□□□□□ -0.59
LINC00458-204ENST00000606055 ARID3CA6NKF2 412 aa11.36□□□□□ -0.59
LINC00458-204ENST00000606055 ATP10BO94823 1461 aa11.36□□□□□ -0.59
LINC00458-204ENST00000606055 NUP153P49790 1475 aaKnown RBP11.36□□□□□ -0.59
LINC00458-204ENST00000606055 EPRSP07814 1512 aaKnown RBP11.35□□□□□ -0.59
LINC00458-204ENST00000606055 LRRIQ1Q96JM4 1722 aa11.35□□□□□ -0.59
LINC00458-204ENST00000606055 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.35□□□□□ -0.59
LINC00458-204ENST00000606055 HNRNPUL2Q1KMD3 747 aaKnown RBP11.35□□□□□ -0.59
LINC00458-204ENST00000606055 PPRC1Q5VV67 1664 aaKnown RBP11.35□□□□□ -0.59
LINC00458-204ENST00000606055 CDK11AQ9UQ88 783 aaPredicted RBP11.33□□□□□ -0.6
LINC00458-204ENST00000606055 PCF11O94913 1555 aaKnown RBP11.33□□□□□ -0.6
LINC00458-204ENST00000606055 ATP1B4Q9UN42 357 aaPredicted RBP11.32□□□□□ -0.6
LINC00458-204ENST00000606055 KCNH8Q96L42 1107 aa11.31□□□□□ -0.6
LINC00458-204ENST00000606055 CDK13Q14004 1512 aaKnown RBP11.3□□□□□ -0.6
LINC00458-204ENST00000606055 ILDR1Q86SU0 546 aaPredicted RBP11.3□□□□□ -0.6
LINC00458-204ENST00000606055 KDM6BO15054 1643 aa11.3□□□□□ -0.6
LINC00458-204ENST00000606055 ABCA9Q8IUA7 1624 aa11.3□□□□□ -0.6
LINC00458-204ENST00000606055 TEX14Q8IWB6 1497 aa11.29□□□□□ -0.6
LINC00458-204ENST00000606055 PLEKHD1A6NEE1 506 aa11.28□□□□□ -0.6
LINC00458-204ENST00000606055 CD109Q6YHK3 1445 aa11.26□□□□□ -0.61
LINC00458-204ENST00000606055 MYO5CQ9NQX4 1742 aa11.26□□□□□ -0.61
LINC00458-204ENST00000606055 TIAM1Q13009 1591 aa11.26□□□□□ -0.61
LINC00458-204ENST00000606055 TROQ12816 1431 aaPredicted RBP11.26□□□□□ -0.61
LINC00458-204ENST00000606055 KIF14Q15058 1648 aa11.25□□□□□ -0.61
LINC00458-204ENST00000606055 APLP2Q06481 763 aa11.25□□□□□ -0.61
LINC00458-204ENST00000606055 MAGI3Q5TCQ9 1506 aa11.25□□□□□ -0.61
LINC00458-204ENST00000606055 EHBP1L1Q8N3D4 1523 aa11.24□□□□□ -0.61
LINC00458-204ENST00000606055 CFAP74Q9C0B2 1584 aa11.24□□□□□ -0.61
LINC00458-204ENST00000606055 LRRC9Q6ZRR7 1453 aa11.23□□□□□ -0.61
LINC00458-204ENST00000606055 TTC37Q6PGP7 1564 aa11.23□□□□□ -0.61
LINC00458-204ENST00000606055 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.22□□□□□ -0.61
LINC00458-204ENST00000606055 MTUS2Q5JR59 1369 aa11.21□□□□□ -0.61
LINC00458-204ENST00000606055 ARAP3Q8WWN8 1544 aa11.2□□□□□ -0.62
LINC00458-204ENST00000606055 CDC42BPAQ5VT25 1732 aa11.18□□□□□ -0.62
LINC00458-204ENST00000606055 NEO1Q92859 1461 aa11.18□□□□□ -0.62
LINC00458-204ENST00000606055 CDC42BPBQ9Y5S2 1711 aa11.18□□□□□ -0.62
LINC00458-204ENST00000606055 PREX2Q70Z35 1606 aa11.17□□□□□ -0.62
LINC00458-204ENST00000606055 PHLDB1Q86UU1 1377 aa11.16□□□□□ -0.62
LINC00458-204ENST00000606055 SUPT6HQ7KZ85 1726 aaKnown RBP11.15□□□□□ -0.62
LINC00458-204ENST00000606055 ITSN2Q9NZM3 1697 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms