RNA–Protein interactions for RNA: ENST00000602516.1

HCG18-244, Transcript of HLA complex group 18, humanhuman

BASIC

Gene HCG18, Length 2,890 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-244ENST00000602516 TNIKQ9UKE5 1360 aa11.35□□□□□ -0.59
HCG18-244ENST00000602516 TOP2BQ02880 1626 aa11.33□□□□□ -0.6
HCG18-244ENST00000602516 BIVM-ERCC5R4GMW8 1640 aa11.32□□□□□ -0.6
HCG18-244ENST00000602516 NEFLP07196 543 aa11.32□□□□□ -0.6
HCG18-244ENST00000602516 GTF3C3Q9Y5Q9 886 aa11.31□□□□□ -0.6
HCG18-244ENST00000602516 KIF21BO75037 1637 aa11.31□□□□□ -0.6
HCG18-244ENST00000602516 GOLGA3Q08378 1498 aa11.3□□□□□ -0.6
HCG18-244ENST00000602516 CEP162Q5TB80 1403 aa11.3□□□□□ -0.6
HCG18-244ENST00000602516 CFTRP13569 1480 aa11.28□□□□□ -0.6
HCG18-244ENST00000602516 CEP164Q9UPV0 1460 aa11.27□□□□□ -0.61
HCG18-244ENST00000602516 PRDM2Q13029 1718 aa11.27□□□□□ -0.61
HCG18-244ENST00000602516 SALL2Q9Y467 1007 aaPredicted RBP11.25□□□□□ -0.61
HCG18-244ENST00000602516 NEUROD1Q13562 356 aa11.25□□□□□ -0.61
HCG18-244ENST00000602516 CUX1P39880 1505 aa11.22□□□□□ -0.61
HCG18-244ENST00000602516 FGD1P98174 961 aa11.22□□□□□ -0.61
HCG18-244ENST00000602516 BCL11BQ9C0K0 894 aaPredicted RBP11.22□□□□□ -0.61
HCG18-244ENST00000602516 UBTFP17480 764 aaKnown RBP11.21□□□□□ -0.61
HCG18-244ENST00000602516 TAOK2Q9UL54 1235 aa11.21□□□□□ -0.61
HCG18-244ENST00000602516 NPM2Q86SE8 214 aaKnown RBP11.19□□□□□ -0.62
HCG18-244ENST00000602516 ZEB1P37275 1124 aaPredicted RBP11.18□□□□□ -0.62
HCG18-244ENST00000602516 RAPGEF2Q9Y4G8 1499 aa11.17□□□□□ -0.62
HCG18-244ENST00000602516 CCDC136Q96JN2 1154 aa11.17□□□□□ -0.62
HCG18-244ENST00000602516 ERICH3Q5RHP9 1530 aa11.16□□□□□ -0.62
HCG18-244ENST00000602516 CADPSQ9ULU8 1353 aa11.16□□□□□ -0.62
HCG18-244ENST00000602516 PRXQ9BXM0 1461 aa11.15□□□□□ -0.62
HCG18-244ENST00000602516 TAF7LQ5H9L4 462 aa11.15□□□□□ -0.62
HCG18-244ENST00000602516 CHMP4AQ9BY43 222 aa11.14□□□□□ -0.63
HCG18-244ENST00000602516 CLIP1P30622 1438 aa11.13□□□□□ -0.63
HCG18-244ENST00000602516 ATF5Q9Y2D1 282 aaPredicted RBP11.11□□□□□ -0.63
HCG18-244ENST00000602516 KIF27Q86VH2 1401 aa11.11□□□□□ -0.63
HCG18-244ENST00000602516 NESP48681 1621 aa11.1□□□□□ -0.63
HCG18-244ENST00000602516 LAMC3Q9Y6N6 1575 aa11.1□□□□□ -0.63
HCG18-244ENST00000602516 VPS8Q8N3P4 1428 aa11.09□□□□□ -0.63
HCG18-244ENST00000602516 DHX37Q8IY37 1157 aaKnown RBP11.09□□□□□ -0.63
HCG18-244ENST00000602516 ERICH6BQ5W0A0 696 aa11.07□□□□□ -0.64
HCG18-244ENST00000602516 C14orf37Q86TY3 774 aa11.07□□□□□ -0.64
HCG18-244ENST00000602516 SAMD1Q6SPF0 538 aaPredicted RBP11.06□□□□□ -0.64
HCG18-244ENST00000602516 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.05□□□□□ -0.64
HCG18-244ENST00000602516 ERCC6Q03468 1493 aa11.04□□□□□ -0.64
HCG18-244ENST00000602516 MYCNP04198 464 aaPredicted RBP11.04□□□□□ -0.64
HCG18-244ENST00000602516 AAMPQ13685 434 aa11.04□□□□□ -0.64
HCG18-244ENST00000602516 FANCD2Q9BXW9 1451 aa11.03□□□□□ -0.64
HCG18-244ENST00000602516 FGD5Q6ZNL6 1462 aa11.03□□□□□ -0.64
HCG18-244ENST00000602516 PDS5BQ9NTI5 1447 aa11.02□□□□□ -0.65
HCG18-244ENST00000602516 TPRNQ4KMQ1 711 aa11.01□□□□□ -0.65
HCG18-244ENST00000602516 CUX2O14529 1486 aa11.01□□□□□ -0.65
HCG18-244ENST00000602516 ARAP1Q96P48 1450 aa11.01□□□□□ -0.65
HCG18-244ENST00000602516 IGF1RP08069 1367 aa11□□□□□ -0.65
HCG18-244ENST00000602516 DNMBPQ6XZF7 1577 aa11□□□□□ -0.65
HCG18-244ENST00000602516 BRD2P25440 801 aaKnown RBP11□□□□□ -0.65
HCG18-244ENST00000602516 HAP1P54257 671 aaPredicted RBP11□□□□□ -0.65
HCG18-244ENST00000602516 A0A0U1RQG5 324 aaPredicted RBP10.98□□□□□ -0.65
HCG18-244ENST00000602516 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.98□□□□□ -0.65
HCG18-244ENST00000602516 KIF21AQ7Z4S6 1674 aa10.97□□□□□ -0.65
HCG18-244ENST00000602516 TOPBP1Q92547 1522 aa10.96□□□□□ -0.65
HCG18-244ENST00000602516 U3KPZ7 1027 aaPredicted RBP10.95□□□□□ -0.66
HCG18-244ENST00000602516 FKBP8Q14318 412 aa10.95□□□□□ -0.66
HCG18-244ENST00000602516 ABCA10Q8WWZ4 1543 aa10.95□□□□□ -0.66
HCG18-244ENST00000602516 CCER1Q8TC90 406 aaPredicted RBP10.95□□□□□ -0.66
HCG18-244ENST00000602516 ARHGAP35Q9NRY4 1499 aa10.94□□□□□ -0.66
HCG18-244ENST00000602516 THOC2Q8NI27 1593 aaKnown RBP10.94□□□□□ -0.66
HCG18-244ENST00000602516 POLA1P09884 1462 aaPredicted RBP10.94□□□□□ -0.66
HCG18-244ENST00000602516 CARMIL1Q5VZK9 1371 aa10.93□□□□□ -0.66
HCG18-244ENST00000602516 RSPH6AQ9H0K4 717 aa10.93□□□□□ -0.66
HCG18-244ENST00000602516 RBM10P98175 930 aaKnown RBP10.91□□□□□ -0.66
HCG18-244ENST00000602516 WDR97A6NE52 1622 aa10.91□□□□□ -0.66
HCG18-244ENST00000602516 FBXO3Q9UK99 471 aa10.91□□□□□ -0.66
HCG18-244ENST00000602516 MRC2Q9UBG0 1479 aa10.9□□□□□ -0.66
HCG18-244ENST00000602516 RAD54L2Q9Y4B4 1467 aa10.9□□□□□ -0.66
HCG18-244ENST00000602516 URB2Q14146 1524 aaKnown RBP10.9□□□□□ -0.66
HCG18-244ENST00000602516 RSPH4AQ5TD94 716 aa10.89□□□□□ -0.67
HCG18-244ENST00000602516 CUL7Q14999 1698 aa10.89□□□□□ -0.67
HCG18-244ENST00000602516 ZMYND15Q9H091 742 aa10.87□□□□□ -0.67
HCG18-244ENST00000602516 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.87□□□□□ -0.67
HCG18-244ENST00000602516 WDR62O43379 1518 aa10.87□□□□□ -0.67
HCG18-244ENST00000602516 DEKP35659 375 aaKnown RBP10.87□□□□□ -0.67
HCG18-244ENST00000602516 PAXIP1Q6ZW49 1069 aaPredicted RBP10.87□□□□□ -0.67
HCG18-244ENST00000602516 MAP3K1Q13233 1512 aa10.86□□□□□ -0.67
HCG18-244ENST00000602516 BCANQ96GW7 911 aa10.85□□□□□ -0.67
HCG18-244ENST00000602516 KANK4Q5T7N3 995 aaPredicted RBP10.85□□□□□ -0.67
HCG18-244ENST00000602516 ABCA5Q8WWZ7 1642 aa10.85□□□□□ -0.67
HCG18-244ENST00000602516 CLSPNQ9HAW4 1339 aa10.84□□□□□ -0.67
HCG18-244ENST00000602516 TSHZ2Q9NRE2 1034 aa10.83□□□□□ -0.68
HCG18-244ENST00000602516 RRBP1Q9P2E9 1410 aaKnown RBP10.83□□□□□ -0.68
HCG18-244ENST00000602516 CTTNBP2Q8WZ74 1663 aa10.83□□□□□ -0.68
HCG18-244ENST00000602516 HNRNPUL2Q1KMD3 747 aaKnown RBP10.82□□□□□ -0.68
HCG18-244ENST00000602516 TIAM1Q13009 1591 aa10.81□□□□□ -0.68
HCG18-244ENST00000602516 EFCAB5A4FU69 1503 aa10.8□□□□□ -0.68
HCG18-244ENST00000602516 TARBP1Q13395 1621 aaKnown RBP10.79□□□□□ -0.68
HCG18-244ENST00000602516 FHAD1B1AJZ9 1412 aa10.79□□□□□ -0.68
HCG18-244ENST00000602516 MYT1LQ9UL68 1186 aa10.79□□□□□ -0.68
HCG18-244ENST00000602516 CFAP43Q8NDM7 1665 aa10.78□□□□□ -0.68
HCG18-244ENST00000602516 GAPVD1Q14C86 1478 aa10.78□□□□□ -0.68
HCG18-244ENST00000602516 PCF11O94913 1555 aaKnown RBP10.76□□□□□ -0.69
HCG18-244ENST00000602516 AQRO60306 1485 aaKnown RBP eCLIP10.76□□□□□ -0.69
HCG18-244ENST00000602516 LRRC9Q6ZRR7 1453 aa10.76□□□□□ -0.69
HCG18-244ENST00000602516 TDRD9Q8NDG6 1382 aaKnown RBP10.75□□□□□ -0.69
HCG18-244ENST00000602516 ATXN8OSP0DMR3 200 aa10.75□□□□□ -0.69
HCG18-244ENST00000602516 CCNB3Q8WWL7 1395 aa10.75□□□□□ -0.69
HCG18-244ENST00000602516 FYCO1Q9BQS8 1478 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms