RNA–Protein interactions for RNA: ENST00000602253.5

ZNF546-209, Transcript of zinc finger protein 546, humanhuman

TSL 3

Gene ZNF546, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546-209ENST00000602253 ZNF608Q9ULD9 1512 aaPredicted RBP8.49□□□□□ -1.05
ZNF546-209ENST00000602253 FBLN2P98095 1184 aa8.49□□□□□ -1.05
ZNF546-209ENST00000602253 MKRN4PQ13434 485 aaPredicted RBP8.49□□□□□ -1.05
ZNF546-209ENST00000602253 IFT140Q96RY7 1462 aa8.48□□□□□ -1.05
ZNF546-209ENST00000602253 MROH2BQ7Z745 1585 aa8.46□□□□□ -1.06
ZNF546-209ENST00000602253 CFTRP13569 1480 aa8.45□□□□□ -1.06
ZNF546-209ENST00000602253 CHD1O14646 1710 aa8.45□□□□□ -1.06
ZNF546-209ENST00000602253 KDM4FA0A1W2PPD8 638 aa8.4□□□□□ -1.06
ZNF546-209ENST00000602253 EIF4G3O43432 1585 aaKnown RBP8.39□□□□□ -1.07
ZNF546-209ENST00000602253 AQRO60306 1485 aaKnown RBP eCLIP8.38□□□□□ -1.07
ZNF546-209ENST00000602253 AKT1S1Q96B36 256 aa8.37□□□□□ -1.07
ZNF546-209ENST00000602253 CHMP7Q8WUX9 453 aaPredicted RBP8.34□□□□□ -1.07
ZNF546-209ENST00000602253 ABCC8Q09428 1581 aa8.34□□□□□ -1.07
ZNF546-209ENST00000602253 CLASP1Q7Z460 1538 aa8.34□□□□□ -1.08
ZNF546-209ENST00000602253 TOPBP1Q92547 1522 aa8.34□□□□□ -1.08
ZNF546-209ENST00000602253 GAPVD1Q14C86 1478 aa8.33□□□□□ -1.08
ZNF546-209ENST00000602253 SPDYE2BA6NHP3 402 aa8.33□□□□□ -1.08
ZNF546-209ENST00000602253 SPDYE6P0CI01 402 aa8.33□□□□□ -1.08
ZNF546-209ENST00000602253 SPDYE2Q495Y8 402 aa8.33□□□□□ -1.08
ZNF546-209ENST00000602253 FBXO41Q8TF61 875 aa8.33□□□□□ -1.08
ZNF546-209ENST00000602253 WIZO95785 1651 aa8.33□□□□□ -1.08
ZNF546-209ENST00000602253 REM2Q8IYK8 340 aaPredicted RBP8.32□□□□□ -1.08
ZNF546-209ENST00000602253 SYNJ1O43426 1573 aa8.31□□□□□ -1.08
ZNF546-209ENST00000602253 TARBP1Q13395 1621 aaKnown RBP8.29□□□□□ -1.08
ZNF546-209ENST00000602253 PRDM2Q13029 1718 aa8.29□□□□□ -1.08
ZNF546-209ENST00000602253 ZNF692Q9BU19 519 aaPredicted RBP8.29□□□□□ -1.08
ZNF546-209ENST00000602253 CHRDL2Q6WN34 429 aa8.28□□□□□ -1.08
ZNF546-209ENST00000602253 KIF13AQ9H1H9 1805 aa8.28□□□□□ -1.08
ZNF546-209ENST00000602253 SSUH2Q9Y2M2 353 aa8.27□□□□□ -1.09
ZNF546-209ENST00000602253 ERCC6L2Q5T890 1561 aa8.27□□□□□ -1.09
ZNF546-209ENST00000602253 TDRD9Q8NDG6 1382 aaKnown RBP8.25□□□□□ -1.09
ZNF546-209ENST00000602253 FAM69CQ0P6D2 419 aa8.25□□□□□ -1.09
ZNF546-209ENST00000602253 DNMBPQ6XZF7 1577 aa8.24□□□□□ -1.09
ZNF546-209ENST00000602253 PITPNM1O00562 1244 aa8.24□□□□□ -1.09
ZNF546-209ENST00000602253 SNAPC4Q5SXM2 1469 aa8.24□□□□□ -1.09
ZNF546-209ENST00000602253 SOCS7O14512 581 aa8.23□□□□□ -1.09
ZNF546-209ENST00000602253 LMTK3Q96Q04 1460 aa8.22□□□□□ -1.09
ZNF546-209ENST00000602253 MAGI1Q96QZ7 1491 aaPredicted RBP8.22□□□□□ -1.09
ZNF546-209ENST00000602253 SOGA1O94964 1423 aa8.21□□□□□ -1.09
ZNF546-209ENST00000602253 SYNJ2O15056 1496 aa8.2□□□□□ -1.1
ZNF546-209ENST00000602253 POLA1P09884 1462 aaPredicted RBP8.2□□□□□ -1.1
ZNF546-209ENST00000602253 HECW2Q9P2P5 1572 aa8.2□□□□□ -1.1
ZNF546-209ENST00000602253 RAD54L2Q9Y4B4 1467 aa8.19□□□□□ -1.1
ZNF546-209ENST00000602253 WDR97A6NE52 1622 aa8.18□□□□□ -1.1
ZNF546-209ENST00000602253 KDM6BO15054 1643 aa8.18□□□□□ -1.1
ZNF546-209ENST00000602253 NPM1P06748 294 aaKnown RBP eCLIP8.18□□□□□ -1.1
ZNF546-209ENST00000602253 GRIN2BQ13224 1484 aa8.18□□□□□ -1.1
ZNF546-209ENST00000602253 ABCC10Q5T3U5 1492 aa8.18□□□□□ -1.1
ZNF546-209ENST00000602253 TOP2AP11388 1531 aaKnown RBP8.18□□□□□ -1.1
ZNF546-209ENST00000602253 SPDYE4A6NLX3 237 aa8.15□□□□□ -1.1
ZNF546-209ENST00000602253 CLEC11AQ9Y240 323 aa8.15□□□□□ -1.1
ZNF546-209ENST00000602253 ADGRL1O94910 1474 aa8.14□□□□□ -1.11
ZNF546-209ENST00000602253 PIP4P2Q8N4L2 257 aa8.14□□□□□ -1.11
ZNF546-209ENST00000602253 SPDYE1Q8NFV5 336 aaPredicted RBP8.14□□□□□ -1.11
ZNF546-209ENST00000602253 CCDC88BA6NC98 1476 aa8.13□□□□□ -1.11
ZNF546-209ENST00000602253 ILDR2Q71H61 639 aa8.13□□□□□ -1.11
ZNF546-209ENST00000602253 TSPOAP1O95153 1857 aa8.11□□□□□ -1.11
ZNF546-209ENST00000602253 CEP170Q5SW79 1584 aa8.11□□□□□ -1.11
ZNF546-209ENST00000602253 FXR2P51116 673 aaKnown RBP eCLIP8.11□□□□□ -1.11
ZNF546-209ENST00000602253 DIP2BQ9P265 1576 aa8.1□□□□□ -1.11
ZNF546-209ENST00000602253 MAPKBP1O60336 1514 aa8.08□□□□□ -1.12
ZNF546-209ENST00000602253 DISP3Q9P2K9 1392 aa8.08□□□□□ -1.12
ZNF546-209ENST00000602253 FGD5Q6ZNL6 1462 aa8.07□□□□□ -1.12
ZNF546-209ENST00000602253 PBRM1Q86U86 1689 aa8.06□□□□□ -1.12
ZNF546-209ENST00000602253 SHROOM2Q13796 1616 aa8.06□□□□□ -1.12
ZNF546-209ENST00000602253 JPH4Q96JJ6 628 aa8.05□□□□□ -1.12
ZNF546-209ENST00000602253 GRIN2AQ12879 1464 aa8.05□□□□□ -1.12
ZNF546-209ENST00000602253 NUP160Q12769 1436 aa8.04□□□□□ -1.12
ZNF546-209ENST00000602253 PRG4Q92954 1404 aaPredicted RBP8.04□□□□□ -1.12
ZNF546-209ENST00000602253 PRR29P0C7W0 189 aa8.03□□□□□ -1.12
ZNF546-209ENST00000602253 SP7Q8TDD2 431 aaPredicted RBP8.03□□□□□ -1.12
ZNF546-209ENST00000602253 PRKAR2AP13861 404 aaKnown RBP8.02□□□□□ -1.13
ZNF546-209ENST00000602253 CHADLQ6NUI6 762 aa8.01□□□□□ -1.13
ZNF546-209ENST00000602253 TOP2BQ02880 1626 aa8□□□□□ -1.13
ZNF546-209ENST00000602253 FKBP8Q14318 412 aa7.98□□□□□ -1.13
ZNF546-209ENST00000602253 PROM2Q8N271 834 aa7.98□□□□□ -1.13
ZNF546-209ENST00000602253 CUX1P39880 1505 aa7.98□□□□□ -1.13
ZNF546-209ENST00000602253 ADCY10Q96PN6 1610 aa7.97□□□□□ -1.13
ZNF546-209ENST00000602253 CERKQ8TCT0 537 aa7.97□□□□□ -1.13
ZNF546-209ENST00000602253 COL17A1Q9UMD9 1497 aaPredicted RBP7.97□□□□□ -1.13
ZNF546-209ENST00000602253 ABCA10Q8WWZ4 1543 aa7.97□□□□□ -1.13
ZNF546-209ENST00000602253 ABCA5Q8WWZ7 1642 aa7.96□□□□□ -1.13
ZNF546-209ENST00000602253 FHAD1B1AJZ9 1412 aa7.96□□□□□ -1.13
ZNF546-209ENST00000602253 STAG3Q9UJ98 1225 aa7.95□□□□□ -1.14
ZNF546-209ENST00000602253 PPRC1Q5VV67 1664 aaKnown RBP7.95□□□□□ -1.14
ZNF546-209ENST00000602253 GLI2P10070 1586 aa7.93□□□□□ -1.14
ZNF546-209ENST00000602253 ADAMTS12P58397 1594 aa7.93□□□□□ -1.14
ZNF546-209ENST00000602253 HAX1O00165 279 aa7.92□□□□□ -1.14
ZNF546-209ENST00000602253 PLB1Q6P1J6 1458 aa7.92□□□□□ -1.14
ZNF546-209ENST00000602253 TEX14Q8IWB6 1497 aa7.91□□□□□ -1.14
ZNF546-209ENST00000602253 EVX2Q03828 476 aa7.9□□□□□ -1.14
ZNF546-209ENST00000602253 CREBZFQ9NS37 354 aa7.9□□□□□ -1.14
ZNF546-209ENST00000602253 ASXL2Q76L83 1435 aa7.89□□□□□ -1.15
ZNF546-209ENST00000602253 SPATA31D1Q6ZQQ2 1576 aa7.88□□□□□ -1.15
ZNF546-209ENST00000602253 PTPRMP28827 1452 aa7.87□□□□□ -1.15
ZNF546-209ENST00000602253 PTPRGP23470 1445 aa7.87□□□□□ -1.15
ZNF546-209ENST00000602253 FARP1Q9Y4F1 1045 aaPredicted RBP7.87□□□□□ -1.15
ZNF546-209ENST00000602253 ERICH3Q5RHP9 1530 aa7.87□□□□□ -1.15
ZNF546-209ENST00000602253 ABCC2Q92887 1545 aa7.86□□□□□ -1.15
ZNF546-209ENST00000602253 WRNQ14191 1432 aaPredicted RBP eCLIP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms