RNA–Protein interactions for RNA: ENST00000602213.5

SOX9-AS1-216, SOX9 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene SOX9-AS1, Length 821 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-216ENST00000602213 HRCP23327 699 aa10.22□□□□□ -0.77
SOX9-AS1-216ENST00000602213 DNAJC5BQ9UF47 199 aa10.22□□□□□ -0.77
SOX9-AS1-216ENST00000602213 GAPVD1Q14C86 1478 aa10.22□□□□□ -0.77
SOX9-AS1-216ENST00000602213 ARHGAP35Q9NRY4 1499 aa10.22□□□□□ -0.77
SOX9-AS1-216ENST00000602213 ADAMTS12P58397 1594 aa10.22□□□□□ -0.77
SOX9-AS1-216ENST00000602213 CFAP43Q8NDM7 1665 aa10.21□□□□□ -0.78
SOX9-AS1-216ENST00000602213 IFT140Q96RY7 1462 aa10.19□□□□□ -0.78
SOX9-AS1-216ENST00000602213 SAMD9Q5K651 1589 aa10.18□□□□□ -0.78
SOX9-AS1-216ENST00000602213 MAP3K1Q13233 1512 aa10.17□□□□□ -0.78
SOX9-AS1-216ENST00000602213 EIF4G3O43432 1585 aaKnown RBP10.16□□□□□ -0.78
SOX9-AS1-216ENST00000602213 DMRT2Q9Y5R5 561 aa10.15□□□□□ -0.78
SOX9-AS1-216ENST00000602213 ERCC6Q03468 1493 aa10.15□□□□□ -0.78
SOX9-AS1-216ENST00000602213 FHAD1B1AJZ9 1412 aa10.14□□□□□ -0.79
SOX9-AS1-216ENST00000602213 PCF11O94913 1555 aaKnown RBP10.14□□□□□ -0.79
SOX9-AS1-216ENST00000602213 TIAM1Q13009 1591 aa10.14□□□□□ -0.79
SOX9-AS1-216ENST00000602213 GRIN2BQ13224 1484 aa10.13□□□□□ -0.79
SOX9-AS1-216ENST00000602213 AQRO60306 1485 aaKnown RBP eCLIP10.12□□□□□ -0.79
SOX9-AS1-216ENST00000602213 TDRD9Q8NDG6 1382 aaKnown RBP10.11□□□□□ -0.79
SOX9-AS1-216ENST00000602213 FYCO1Q9BQS8 1478 aa10.1□□□□□ -0.79
SOX9-AS1-216ENST00000602213 SCAF1Q9H7N4 1312 aaKnown RBP10.1□□□□□ -0.79
SOX9-AS1-216ENST00000602213 IQGAP2Q13576 1575 aa10.1□□□□□ -0.79
SOX9-AS1-216ENST00000602213 APLP2Q06481 763 aa10.1□□□□□ -0.79
SOX9-AS1-216ENST00000602213 ZEB1P37275 1124 aaPredicted RBP10.08□□□□□ -0.8
SOX9-AS1-216ENST00000602213 LRRIQ1Q96JM4 1722 aa10.07□□□□□ -0.8
SOX9-AS1-216ENST00000602213 MAGI1Q96QZ7 1491 aaPredicted RBP10.07□□□□□ -0.8
SOX9-AS1-216ENST00000602213 PPARGC1BQ86YN6 1023 aaKnown RBP10.07□□□□□ -0.8
SOX9-AS1-216ENST00000602213 FMN1Q68DA7 1419 aa10.07□□□□□ -0.8
SOX9-AS1-216ENST00000602213 ZNF608Q9ULD9 1512 aaPredicted RBP10.06□□□□□ -0.8
SOX9-AS1-216ENST00000602213 SNAPC4Q5SXM2 1469 aa10.05□□□□□ -0.8
SOX9-AS1-216ENST00000602213 CASKIN1Q8WXD9 1431 aa10.05□□□□□ -0.8
SOX9-AS1-216ENST00000602213 UGGT2Q9NYU1 1516 aa10.04□□□□□ -0.8
SOX9-AS1-216ENST00000602213 RANGAP1P46060 587 aaPredicted RBP10.04□□□□□ -0.8
SOX9-AS1-216ENST00000602213 FHOD3Q2V2M9 1422 aa10.04□□□□□ -0.8
SOX9-AS1-216ENST00000602213 RRBP1Q9P2E9 1410 aaKnown RBP10.04□□□□□ -0.8
SOX9-AS1-216ENST00000602213 HECW1Q76N89 1606 aa10.04□□□□□ -0.8
SOX9-AS1-216ENST00000602213 LRRC9Q6ZRR7 1453 aa10.03□□□□□ -0.8
SOX9-AS1-216ENST00000602213 GRIN2AQ12879 1464 aa10.02□□□□□ -0.81
SOX9-AS1-216ENST00000602213 KIAA0556O60303 1618 aa10.01□□□□□ -0.81
SOX9-AS1-216ENST00000602213 SYNJ2O15056 1496 aa10□□□□□ -0.81
SOX9-AS1-216ENST00000602213 SUPT6HQ7KZ85 1726 aaKnown RBP9.99□□□□□ -0.81
SOX9-AS1-216ENST00000602213 CCDC18Q5T9S5 1454 aa9.99□□□□□ -0.81
SOX9-AS1-216ENST00000602213 EHBP1L1Q8N3D4 1523 aa9.99□□□□□ -0.81
SOX9-AS1-216ENST00000602213 KIAA0586Q9BVV6 1533 aa9.99□□□□□ -0.81
SOX9-AS1-216ENST00000602213 CEP170Q5SW79 1584 aa9.98□□□□□ -0.81
SOX9-AS1-216ENST00000602213 TTBK1Q5TCY1 1321 aaPredicted RBP9.98□□□□□ -0.81
SOX9-AS1-216ENST00000602213 CHD1O14646 1710 aa9.96□□□□□ -0.82
SOX9-AS1-216ENST00000602213 KANK4Q5T7N3 995 aaPredicted RBP9.95□□□□□ -0.82
SOX9-AS1-216ENST00000602213 NUP160Q12769 1436 aa9.95□□□□□ -0.82
SOX9-AS1-216ENST00000602213 CCNB3Q8WWL7 1395 aa9.94□□□□□ -0.82
SOX9-AS1-216ENST00000602213 RAPGEF6Q8TEU7 1601 aa9.93□□□□□ -0.82
SOX9-AS1-216ENST00000602213 DISP1Q96F81 1524 aa9.93□□□□□ -0.82
SOX9-AS1-216ENST00000602213 ARHGEF11O15085 1522 aa9.92□□□□□ -0.82
SOX9-AS1-216ENST00000602213 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.91□□□□□ -0.82
SOX9-AS1-216ENST00000602213 EPRSP07814 1512 aaKnown RBP9.89□□□□□ -0.83
SOX9-AS1-216ENST00000602213 SHROOM2Q13796 1616 aa9.89□□□□□ -0.83
SOX9-AS1-216ENST00000602213 ADCY10Q96PN6 1610 aa9.89□□□□□ -0.83
SOX9-AS1-216ENST00000602213 PHLDB1Q86UU1 1377 aa9.88□□□□□ -0.83
SOX9-AS1-216ENST00000602213 P3H3Q8IVL6 736 aa9.88□□□□□ -0.83
SOX9-AS1-216ENST00000602213 CCER1Q8TC90 406 aaPredicted RBP9.88□□□□□ -0.83
SOX9-AS1-216ENST00000602213 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.87□□□□□ -0.83
SOX9-AS1-216ENST00000602213 MAGI3Q5TCQ9 1506 aa9.87□□□□□ -0.83
SOX9-AS1-216ENST00000602213 ITSN2Q9NZM3 1697 aa9.87□□□□□ -0.83
SOX9-AS1-216ENST00000602213 NCOA2Q15596 1464 aa9.86□□□□□ -0.83
SOX9-AS1-216ENST00000602213 PTPN23Q9H3S7 1636 aa9.86□□□□□ -0.83
SOX9-AS1-216ENST00000602213 MTUS2Q5JR59 1369 aa9.86□□□□□ -0.83
SOX9-AS1-216ENST00000602213 FGD6Q6ZV73 1430 aa9.85□□□□□ -0.83
SOX9-AS1-216ENST00000602213 GCC2Q8IWJ2 1684 aa9.85□□□□□ -0.83
SOX9-AS1-216ENST00000602213 CLSPNQ9HAW4 1339 aa9.84□□□□□ -0.83
SOX9-AS1-216ENST00000602213 MYOM3Q5VTT5 1437 aa9.84□□□□□ -0.83
SOX9-AS1-216ENST00000602213 CARMIL2Q6F5E8 1435 aa9.84□□□□□ -0.83
SOX9-AS1-216ENST00000602213 CDK13Q14004 1512 aaKnown RBP9.84□□□□□ -0.83
SOX9-AS1-216ENST00000602213 HNRNPUL2Q1KMD3 747 aaKnown RBP9.84□□□□□ -0.83
SOX9-AS1-216ENST00000602213 NUP153P49790 1475 aaKnown RBP9.84□□□□□ -0.83
SOX9-AS1-216ENST00000602213 CHMP7Q8WUX9 453 aaPredicted RBP9.83□□□□□ -0.84
SOX9-AS1-216ENST00000602213 TCOF1Q13428 1488 aaKnown RBP9.83□□□□□ -0.84
SOX9-AS1-216ENST00000602213 ABCA8O94911 1581 aa9.83□□□□□ -0.84
SOX9-AS1-216ENST00000602213 PPP4R3CPQ6ZMV5 832 aa9.8□□□□□ -0.84
SOX9-AS1-216ENST00000602213 DHX57Q6P158 1386 aaKnown RBP9.79□□□□□ -0.84
SOX9-AS1-216ENST00000602213 CACNB1Q02641 598 aaPredicted RBP9.79□□□□□ -0.84
SOX9-AS1-216ENST00000602213 MIA2Q96PC5 1412 aa9.79□□□□□ -0.84
SOX9-AS1-216ENST00000602213 CLASP1Q7Z460 1538 aa9.78□□□□□ -0.84
SOX9-AS1-216ENST00000602213 CROCC2H7BZ55 1655 aa9.78□□□□□ -0.84
SOX9-AS1-216ENST00000602213 ADGBQ8N7X0 1667 aa9.78□□□□□ -0.84
SOX9-AS1-216ENST00000602213 DCAF8L1A6NGE4 600 aa9.78□□□□□ -0.84
SOX9-AS1-216ENST00000602213 ATP1B4Q9UN42 357 aaPredicted RBP9.78□□□□□ -0.84
SOX9-AS1-216ENST00000602213 CDC42BPAQ5VT25 1732 aa9.77□□□□□ -0.85
SOX9-AS1-216ENST00000602213 AKNAQ7Z591 1439 aa9.77□□□□□ -0.85
SOX9-AS1-216ENST00000602213 SETD5Q9C0A6 1442 aa9.77□□□□□ -0.85
SOX9-AS1-216ENST00000602213 DNMT1P26358 1616 aaKnown RBP9.77□□□□□ -0.85
SOX9-AS1-216ENST00000602213 KIF14Q15058 1648 aa9.77□□□□□ -0.85
SOX9-AS1-216ENST00000602213 TROQ12816 1431 aaPredicted RBP9.75□□□□□ -0.85
SOX9-AS1-216ENST00000602213 PLB1Q6P1J6 1458 aa9.75□□□□□ -0.85
SOX9-AS1-216ENST00000602213 RAB3GAP2Q9H2M9 1393 aa9.75□□□□□ -0.85
SOX9-AS1-216ENST00000602213 HFM1A2PYH4 1435 aa9.74□□□□□ -0.85
SOX9-AS1-216ENST00000602213 MAPKBP1O60336 1514 aa9.74□□□□□ -0.85
SOX9-AS1-216ENST00000602213 JPH4Q96JJ6 628 aa9.73□□□□□ -0.85
SOX9-AS1-216ENST00000602213 PRG4Q92954 1404 aaPredicted RBP9.73□□□□□ -0.85
SOX9-AS1-216ENST00000602213 FBLN2P98095 1184 aa9.72□□□□□ -0.85
SOX9-AS1-216ENST00000602213 FAM50AQ14320 339 aaKnown RBP9.72□□□□□ -0.85
SOX9-AS1-216ENST00000602213 CDK11AQ9UQ88 783 aaPredicted RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms