RNA–Protein interactions for RNA: ENST00000602150.2

SCN1B-205, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 2

Gene SCN1B, Length 3,461 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-205ENST00000602150 KANK4Q5T7N3 995 aaPredicted RBP16.47■□□□□ 0.23
SCN1B-205ENST00000602150 GAPVD1Q14C86 1478 aa16.47■□□□□ 0.23
SCN1B-205ENST00000602150 MRC2Q9UBG0 1479 aa16.47■□□□□ 0.23
SCN1B-205ENST00000602150 DIEXFQ68CQ4 756 aaKnown RBP16.46■□□□□ 0.23
SCN1B-205ENST00000602150 ABCA10Q8WWZ4 1543 aa16.45■□□□□ 0.22
SCN1B-205ENST00000602150 ARAP1Q96P48 1450 aa16.44■□□□□ 0.22
SCN1B-205ENST00000602150 FHOD3Q2V2M9 1422 aa16.41■□□□□ 0.22
SCN1B-205ENST00000602150 VPS8Q8N3P4 1428 aa16.41■□□□□ 0.22
SCN1B-205ENST00000602150 CCER1Q8TC90 406 aaPredicted RBP16.38■□□□□ 0.21
SCN1B-205ENST00000602150 ARHGAP35Q9NRY4 1499 aa16.37■□□□□ 0.21
SCN1B-205ENST00000602150 ERICH3Q5RHP9 1530 aa16.37■□□□□ 0.21
SCN1B-205ENST00000602150 CHMP7Q8WUX9 453 aaPredicted RBP16.37■□□□□ 0.21
SCN1B-205ENST00000602150 TARBP1Q13395 1621 aaKnown RBP16.29■□□□□ 0.2
SCN1B-205ENST00000602150 SNAPC4Q5SXM2 1469 aa16.27■□□□□ 0.2
SCN1B-205ENST00000602150 FAM50AQ14320 339 aaKnown RBP16.26■□□□□ 0.19
SCN1B-205ENST00000602150 ABCA5Q8WWZ7 1642 aa16.24■□□□□ 0.19
SCN1B-205ENST00000602150 IFT140Q96RY7 1462 aa16.24■□□□□ 0.19
SCN1B-205ENST00000602150 WDR62O43379 1518 aa16.23■□□□□ 0.19
SCN1B-205ENST00000602150 GRIN2BQ13224 1484 aa16.22■□□□□ 0.19
SCN1B-205ENST00000602150 WDR97A6NE52 1622 aa16.21■□□□□ 0.19
SCN1B-205ENST00000602150 THOC2Q8NI27 1593 aaKnown RBP16.19■□□□□ 0.18
SCN1B-205ENST00000602150 FHAD1B1AJZ9 1412 aa16.18■□□□□ 0.18
SCN1B-205ENST00000602150 EIF4G3O43432 1585 aaKnown RBP16.18■□□□□ 0.18
SCN1B-205ENST00000602150 ZNF316A6NFI3 1004 aaPredicted RBP16.18■□□□□ 0.18
SCN1B-205ENST00000602150 CUL7Q14999 1698 aa16.16■□□□□ 0.18
SCN1B-205ENST00000602150 PBRM1Q86U86 1689 aa16.16■□□□□ 0.18
SCN1B-205ENST00000602150 PCF11O94913 1555 aaKnown RBP16.12■□□□□ 0.17
SCN1B-205ENST00000602150 ADAMTS12P58397 1594 aa16.1■□□□□ 0.17
SCN1B-205ENST00000602150 MTUS2Q5JR59 1369 aa16.09■□□□□ 0.17
SCN1B-205ENST00000602150 JPH4Q96JJ6 628 aa16.08■□□□□ 0.16
SCN1B-205ENST00000602150 CTTNBP2Q8WZ74 1663 aa16.06■□□□□ 0.16
SCN1B-205ENST00000602150 GRIN2AQ12879 1464 aa16.06■□□□□ 0.16
SCN1B-205ENST00000602150 PHLDB1Q86UU1 1377 aa16.06■□□□□ 0.16
SCN1B-205ENST00000602150 MIER1Q8N108 512 aa16.05■□□□□ 0.16
SCN1B-205ENST00000602150 CHIC2Q9UKJ5 165 aa16.04■□□□□ 0.16
SCN1B-205ENST00000602150 YTHDC1Q96MU7 727 aaKnown RBP16.04■□□□□ 0.16
SCN1B-205ENST00000602150 IQGAP2Q13576 1575 aa16.03■□□□□ 0.16
SCN1B-205ENST00000602150 FMN1Q68DA7 1419 aa16.01■□□□□ 0.15
SCN1B-205ENST00000602150 ZNF777Q9ULD5 760 aaPredicted RBP16.01■□□□□ 0.15
SCN1B-205ENST00000602150 CCNB3Q8WWL7 1395 aa16■□□□□ 0.15
SCN1B-205ENST00000602150 CDK13Q14004 1512 aaKnown RBP16■□□□□ 0.15
SCN1B-205ENST00000602150 TIAM1Q13009 1591 aa15.99■□□□□ 0.15
SCN1B-205ENST00000602150 LRRC9Q6ZRR7 1453 aa15.99■□□□□ 0.15
SCN1B-205ENST00000602150 SYNJ2O15056 1496 aa15.99■□□□□ 0.15
SCN1B-205ENST00000602150 CASKIN1Q8WXD9 1431 aa15.96■□□□□ 0.15
SCN1B-205ENST00000602150 CEP170Q5SW79 1584 aa15.96■□□□□ 0.15
SCN1B-205ENST00000602150 MAGI1Q96QZ7 1491 aaPredicted RBP15.95■□□□□ 0.14
SCN1B-205ENST00000602150 EFCAB5A4FU69 1503 aa15.95■□□□□ 0.14
SCN1B-205ENST00000602150 KIAA0586Q9BVV6 1533 aa15.94■□□□□ 0.14
SCN1B-205ENST00000602150 PLB1Q6P1J6 1458 aa15.94■□□□□ 0.14
SCN1B-205ENST00000602150 RRP7BPQ9NSQ0 103 aa15.92■□□□□ 0.14
SCN1B-205ENST00000602150 FYCO1Q9BQS8 1478 aa15.92■□□□□ 0.14
SCN1B-205ENST00000602150 KCNH8Q96L42 1107 aa15.91■□□□□ 0.14
SCN1B-205ENST00000602150 DISP1Q96F81 1524 aa15.9■□□□□ 0.14
SCN1B-205ENST00000602150 ZNF644Q9H582 1327 aaPredicted RBP15.9■□□□□ 0.14
SCN1B-205ENST00000602150 PRG4Q92954 1404 aaPredicted RBP15.9■□□□□ 0.14
SCN1B-205ENST00000602150 SAMD9Q5K651 1589 aa15.89■□□□□ 0.13
SCN1B-205ENST00000602150 CLSPNQ9HAW4 1339 aa15.88■□□□□ 0.13
SCN1B-205ENST00000602150 MAGI3Q5TCQ9 1506 aa15.85■□□□□ 0.13
SCN1B-205ENST00000602150 CARMIL2Q6F5E8 1435 aa15.85■□□□□ 0.13
SCN1B-205ENST00000602150 SUPT16HQ9Y5B9 1047 aaKnown RBP15.84■□□□□ 0.13
SCN1B-205ENST00000602150 NCOA2Q15596 1464 aa15.84■□□□□ 0.13
SCN1B-205ENST00000602150 EPRSP07814 1512 aaKnown RBP15.84■□□□□ 0.13
SCN1B-205ENST00000602150 KIAA0556O60303 1618 aa15.83■□□□□ 0.13
SCN1B-205ENST00000602150 RRBP1Q9P2E9 1410 aaKnown RBP15.83■□□□□ 0.12
SCN1B-205ENST00000602150 LRRIQ1Q96JM4 1722 aa15.82■□□□□ 0.12
SCN1B-205ENST00000602150 CHD1O14646 1710 aa15.82■□□□□ 0.12
SCN1B-205ENST00000602150 RAB3GAP2Q9H2M9 1393 aa15.82■□□□□ 0.12
SCN1B-205ENST00000602150 PTPRGP23470 1445 aa15.81■□□□□ 0.12
SCN1B-205ENST00000602150 NUP160Q12769 1436 aa15.81■□□□□ 0.12
SCN1B-205ENST00000602150 ERCC6L2Q5T890 1561 aa15.81■□□□□ 0.12
SCN1B-205ENST00000602150 UGGT2Q9NYU1 1516 aa15.8■□□□□ 0.12
SCN1B-205ENST00000602150 TRIM52Q96A61 297 aa15.8■□□□□ 0.12
SCN1B-205ENST00000602150 SIN3AQ96ST3 1273 aa15.8■□□□□ 0.12
SCN1B-205ENST00000602150 ANP32EQ9BTT0 268 aa15.8■□□□□ 0.12
SCN1B-205ENST00000602150 CDK11AQ9UQ88 783 aaPredicted RBP15.8■□□□□ 0.12
SCN1B-205ENST00000602150 NUP153P49790 1475 aaKnown RBP15.79■□□□□ 0.12
SCN1B-205ENST00000602150 FGD6Q6ZV73 1430 aa15.79■□□□□ 0.12
SCN1B-205ENST00000602150 PLEKHD1A6NEE1 506 aa15.78■□□□□ 0.12
SCN1B-205ENST00000602150 TSHZ2Q9NRE2 1034 aa15.78■□□□□ 0.12
SCN1B-205ENST00000602150 CFAP43Q8NDM7 1665 aa15.78■□□□□ 0.12
SCN1B-205ENST00000602150 CFDP1Q9UEE9 299 aaPredicted RBP15.77■□□□□ 0.11
SCN1B-205ENST00000602150 HECW1Q76N89 1606 aa15.75■□□□□ 0.11
SCN1B-205ENST00000602150 FOXD1Q16676 465 aa15.75■□□□□ 0.11
SCN1B-205ENST00000602150 DHX57Q6P158 1386 aaKnown RBP15.74■□□□□ 0.11
SCN1B-205ENST00000602150 PTPRKQ15262 1439 aa15.74■□□□□ 0.11
SCN1B-205ENST00000602150 MYOM3Q5VTT5 1437 aa15.73■□□□□ 0.11
SCN1B-205ENST00000602150 BCL11AQ9H165 835 aa15.71■□□□□ 0.11
SCN1B-205ENST00000602150 RAPGEF6Q8TEU7 1601 aa15.7■□□□□ 0.1
SCN1B-205ENST00000602150 SETD5Q9C0A6 1442 aa15.7■□□□□ 0.1
SCN1B-205ENST00000602150 MAP3K1Q13233 1512 aa15.69■□□□□ 0.1
SCN1B-205ENST00000602150 CCDC18Q5T9S5 1454 aa15.69■□□□□ 0.1
SCN1B-205ENST00000602150 HNRNPMP52272 730 aaKnown RBP eCLIP15.69■□□□□ 0.1
SCN1B-205ENST00000602150 HIRIP3Q9BW71 556 aaPredicted RBP15.69■□□□□ 0.1
SCN1B-205ENST00000602150 EHBP1L1Q8N3D4 1523 aa15.68■□□□□ 0.1
SCN1B-205ENST00000602150 OSCARQ8IYS5 282 aa15.67■□□□□ 0.1
SCN1B-205ENST00000602150 SUPT6HQ7KZ85 1726 aaKnown RBP15.66■□□□□ 0.1
SCN1B-205ENST00000602150 MYT1LQ9UL68 1186 aa15.66■□□□□ 0.1
SCN1B-205ENST00000602150 ATP10BO94823 1461 aa15.65■□□□□ 0.1
SCN1B-205ENST00000602150 ARHGEF11O15085 1522 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms