RNA–Protein interactions for RNA: ENST00000602142.5

VAV1-210, Transcript of vav guanine nucleotide exchange factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAV1, Length 2,620 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAV1-210ENST00000602142 TDRD9Q8NDG6 1382 aaKnown RBP28.75■■■□□ 2.19
VAV1-210ENST00000602142 MAP3K1Q13233 1512 aa28.74■■■□□ 2.19
VAV1-210ENST00000602142 CCNB3Q8WWL7 1395 aa28.73■■■□□ 2.19
VAV1-210ENST00000602142 FHAD1B1AJZ9 1412 aa28.72■■■□□ 2.19
VAV1-210ENST00000602142 DIEXFQ68CQ4 756 aaKnown RBP28.72■■■□□ 2.19
VAV1-210ENST00000602142 TARBP1Q13395 1621 aaKnown RBP28.72■■■□□ 2.19
VAV1-210ENST00000602142 ABCA5Q8WWZ7 1642 aa28.7■■■□□ 2.19
VAV1-210ENST00000602142 CTTNBP2Q8WZ74 1663 aa28.7■■■□□ 2.18
VAV1-210ENST00000602142 IFT140Q96RY7 1462 aa28.69■■■□□ 2.18
VAV1-210ENST00000602142 FHOD3Q2V2M9 1422 aa28.69■■■□□ 2.18
VAV1-210ENST00000602142 PCF11O94913 1555 aaKnown RBP28.68■■■□□ 2.18
VAV1-210ENST00000602142 GAPVD1Q14C86 1478 aa28.67■■■□□ 2.18
VAV1-210ENST00000602142 LRRC9Q6ZRR7 1453 aa28.66■■■□□ 2.18
VAV1-210ENST00000602142 ZNF316A6NFI3 1004 aaPredicted RBP28.65■■■□□ 2.18
VAV1-210ENST00000602142 EFCAB5A4FU69 1503 aa28.65■■■□□ 2.18
VAV1-210ENST00000602142 DHX57Q6P158 1386 aaKnown RBP28.63■■■□□ 2.17
VAV1-210ENST00000602142 ATP1B4Q9UN42 357 aaPredicted RBP28.63■■■□□ 2.17
VAV1-210ENST00000602142 ITGAEP38570 1179 aa28.6■■■□□ 2.17
VAV1-210ENST00000602142 CFAP43Q8NDM7 1665 aa28.6■■■□□ 2.17
VAV1-210ENST00000602142 ZNF608Q9ULD9 1512 aaPredicted RBP28.58■■■□□ 2.17
VAV1-210ENST00000602142 FYCO1Q9BQS8 1478 aa28.55■■■□□ 2.16
VAV1-210ENST00000602142 PHLDB1Q86UU1 1377 aa28.55■■■□□ 2.16
VAV1-210ENST00000602142 CLSPNQ9HAW4 1339 aa28.54■■■□□ 2.16
VAV1-210ENST00000602142 AQRO60306 1485 aaKnown RBP eCLIP28.53■■■□□ 2.166e-6■□□□□ 8.5
VAV1-210ENST00000602142 CASKIN1Q8WXD9 1431 aa28.53■■■□□ 2.16
VAV1-210ENST00000602142 FMN1Q68DA7 1419 aa28.47■■■□□ 2.15
VAV1-210ENST00000602142 EIF4G3O43432 1585 aaKnown RBP28.46■■■□□ 2.15
VAV1-210ENST00000602142 SAMD9Q5K651 1589 aa28.44■■■□□ 2.14
VAV1-210ENST00000602142 SNAPC4Q5SXM2 1469 aa28.41■■■□□ 2.14
VAV1-210ENST00000602142 FAM50AQ14320 339 aaKnown RBP28.41■■■□□ 2.14
VAV1-210ENST00000602142 PBRM1Q86U86 1689 aa28.4■■■□□ 2.14
VAV1-210ENST00000602142 RAB3GAP2Q9H2M9 1393 aa28.39■■■□□ 2.14
VAV1-210ENST00000602142 GRIN2BQ13224 1484 aa28.36■■■□□ 2.13
VAV1-210ENST00000602142 SETD5Q9C0A6 1442 aa28.31■■■□□ 2.12
VAV1-210ENST00000602142 LRRIQ1Q96JM4 1722 aa28.3■■■□□ 2.12
VAV1-210ENST00000602142 ADAMTS12P58397 1594 aa28.27■■■□□ 2.12
VAV1-210ENST00000602142 MTUS2Q5JR59 1369 aa28.26■■■□□ 2.11
VAV1-210ENST00000602142 SCAF1Q9H7N4 1312 aaKnown RBP28.25■■■□□ 2.11
VAV1-210ENST00000602142 MAPKBP1O60336 1514 aa28.21■■■□□ 2.11
VAV1-210ENST00000602142 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.2■■■□□ 2.11
VAV1-210ENST00000602142 IQGAP2Q13576 1575 aa28.2■■■□□ 2.1
VAV1-210ENST00000602142 FGD6Q6ZV73 1430 aa28.2■■■□□ 2.1
VAV1-210ENST00000602142 MAGI1Q96QZ7 1491 aaPredicted RBP28.18■■■□□ 2.1
VAV1-210ENST00000602142 ACIN1Q9UKV3 1341 aaKnown RBP28.17■■■□□ 2.1
VAV1-210ENST00000602142 NEUROD1Q13562 356 aa28.17■■■□□ 2.1
VAV1-210ENST00000602142 MIER1Q8N108 512 aa28.16■■■□□ 2.1
VAV1-210ENST00000602142 NCOA2Q15596 1464 aa28.13■■■□□ 2.09
VAV1-210ENST00000602142 FBLN2P98095 1184 aa28.09■■■□□ 2.09
VAV1-210ENST00000602142 EHBP1L1Q8N3D4 1523 aa28.09■■■□□ 2.09
VAV1-210ENST00000602142 CENPBP07199 599 aaPredicted RBP28.09■■■□□ 2.09
VAV1-210ENST00000602142 SUPT6HQ7KZ85 1726 aaKnown RBP28.09■■■□□ 2.09
VAV1-210ENST00000602142 SYNJ2O15056 1496 aa28.08■■■□□ 2.09
VAV1-210ENST00000602142 CHMP7Q8WUX9 453 aaPredicted RBP28.07■■■□□ 2.08
VAV1-210ENST00000602142 MAGI3Q5TCQ9 1506 aa28.07■■■□□ 2.08
VAV1-210ENST00000602142 MYOM3Q5VTT5 1437 aa28.07■■■□□ 2.08
VAV1-210ENST00000602142 CCDC18Q5T9S5 1454 aa28.06■■■□□ 2.08
VAV1-210ENST00000602142 HECW1Q76N89 1606 aa28.05■■■□□ 2.08
VAV1-210ENST00000602142 UGGT2Q9NYU1 1516 aa28.03■■■□□ 2.08
VAV1-210ENST00000602142 PTPRKQ15262 1439 aa28.03■■■□□ 2.08
VAV1-210ENST00000602142 GRIN2AQ12879 1464 aa28.01■■■□□ 2.07
VAV1-210ENST00000602142 SIN3AQ96ST3 1273 aa28.01■■■□□ 2.07
VAV1-210ENST00000602142 EPRSP07814 1512 aaKnown RBP28■■■□□ 2.07
VAV1-210ENST00000602142 ARHGEF11O15085 1522 aa27.98■■■□□ 2.07
VAV1-210ENST00000602142 KIAA0586Q9BVV6 1533 aa27.97■■■□□ 2.07
VAV1-210ENST00000602142 YTHDC1Q96MU7 727 aaKnown RBP27.97■■■□□ 2.07
VAV1-210ENST00000602142 CHD1O14646 1710 aa27.96■■■□□ 2.07
VAV1-210ENST00000602142 CDK13Q14004 1512 aaKnown RBP27.96■■■□□ 2.07
VAV1-210ENST00000602142 PTPN23Q9H3S7 1636 aa27.95■■■□□ 2.06
VAV1-210ENST00000602142 ARID3CA6NKF2 412 aa27.95■■■□□ 2.06
VAV1-210ENST00000602142 HFM1A2PYH4 1435 aa27.93■■■□□ 2.06
VAV1-210ENST00000602142 DISP1Q96F81 1524 aa27.91■■■□□ 2.06
VAV1-210ENST00000602142 KIAA0556O60303 1618 aa27.9■■■□□ 2.06
VAV1-210ENST00000602142 NAIPQ13075 1403 aa27.87■■■□□ 2.05
VAV1-210ENST00000602142 CEP170Q5SW79 1584 aa27.85■■■□□ 2.05
VAV1-210ENST00000602142 TCOF1Q13428 1488 aaKnown RBP27.84■■■□□ 2.05
VAV1-210ENST00000602142 NUP160Q12769 1436 aa27.83■■■□□ 2.05
VAV1-210ENST00000602142 UACAQ9BZF9 1416 aa27.82■■■□□ 2.04
VAV1-210ENST00000602142 GTF3C3Q9Y5Q9 886 aa27.82■■■□□ 2.04
VAV1-210ENST00000602142 TIMELESSQ9UNS1 1208 aa27.81■■■□□ 2.04
VAV1-210ENST00000602142 CHIC2Q9UKJ5 165 aa27.78■■■□□ 2.04
VAV1-210ENST00000602142 NUP153P49790 1475 aaKnown RBP27.77■■■□□ 2.04
VAV1-210ENST00000602142 RRP7BPQ9NSQ0 103 aa27.76■■■□□ 2.04
VAV1-210ENST00000602142 RAPGEF6Q8TEU7 1601 aa27.76■■■□□ 2.03
VAV1-210ENST00000602142 MIA2Q96PC5 1412 aa27.76■■■□□ 2.03
VAV1-210ENST00000602142 PPP1R15AO75807 674 aaPredicted RBP27.72■■■□□ 2.03
VAV1-210ENST00000602142 GCC2Q8IWJ2 1684 aa27.68■■■□□ 2.02
VAV1-210ENST00000602142 OSCARQ8IYS5 282 aa27.67■■■□□ 2.02
VAV1-210ENST00000602142 TONSLQ96HA7 1378 aa27.65■■■□□ 2.02
VAV1-210ENST00000602142 CDK11AQ9UQ88 783 aaPredicted RBP27.64■■■□□ 2.01
VAV1-210ENST00000602142 JPH4Q96JJ6 628 aa27.63■■■□□ 2.01
VAV1-210ENST00000602142 AKNAQ7Z591 1439 aa27.63■■■□□ 2.01
VAV1-210ENST00000602142 PLB1Q6P1J6 1458 aa27.63■■■□□ 2.01
VAV1-210ENST00000602142 KDM6BO15054 1643 aa27.63■■■□□ 2.01
VAV1-210ENST00000602142 CLASP1Q7Z460 1538 aa27.62■■■□□ 2.01
VAV1-210ENST00000602142 TRIM52Q96A61 297 aa27.59■■■□□ 2.01
VAV1-210ENST00000602142 CARMIL2Q6F5E8 1435 aa27.59■■■□□ 2.01
VAV1-210ENST00000602142 ZNF644Q9H582 1327 aaPredicted RBP27.59■■■□□ 2.01
VAV1-210ENST00000602142 PRG4Q92954 1404 aaPredicted RBP27.58■■■□□ 2.01
VAV1-210ENST00000602142 DAPK1P53355 1430 aa27.57■■■□□ 2
VAV1-210ENST00000602142 HIRIP3Q9BW71 556 aaPredicted RBP27.56■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms