RNA–Protein interactions for RNA: ENST00000602133.5

ATP1A3-209, Transcript of ATPase Na+/K+ transporting subunit alpha 3, humanhuman

TSL 2 BASIC

Gene ATP1A3, Length 3,458 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A3-209ENST00000602133 PPP1R15AO75807 674 aaPredicted RBP15.15■□□□□ 0.02
ATP1A3-209ENST00000602133 NEFLP07196 543 aa15.13■□□□□ 0.01
ATP1A3-209ENST00000602133 BIVM-ERCC5R4GMW8 1640 aa15.12■□□□□ 0.01
ATP1A3-209ENST00000602133 FAM50AQ14320 339 aaKnown RBP15.12■□□□□ 0.01
ATP1A3-209ENST00000602133 SETD5Q9C0A6 1442 aa15.1■□□□□ 0.01
ATP1A3-209ENST00000602133 MSH5O43196 834 aa15.09■□□□□ 0.01
ATP1A3-209ENST00000602133 KIF27Q86VH2 1401 aa15.08■□□□□ 0.01
ATP1A3-209ENST00000602133 CUX1P39880 1505 aa15.08■□□□□ 0.01
ATP1A3-209ENST00000602133 PHLDB1Q86UU1 1377 aa15.07■□□□□ 0
ATP1A3-209ENST00000602133 ANP32CO43423 234 aa15.06■□□□□ 0
ATP1A3-209ENST00000602133 IRX6P78412 446 aaPredicted RBP15.05■□□□□ 0
ATP1A3-209ENST00000602133 ATP1B4Q9UN42 357 aaPredicted RBP15.04■□□□□ -0
ATP1A3-209ENST00000602133 P3H3Q8IVL6 736 aa15.03■□□□□ -0
ATP1A3-209ENST00000602133 CCER2I3L3R5 266 aa15.01□□□□□ -0.01
ATP1A3-209ENST00000602133 TIAM1Q13009 1591 aa15.01□□□□□ -0.01
ATP1A3-209ENST00000602133 LRRC9Q6ZRR7 1453 aa14.99□□□□□ -0.01
ATP1A3-209ENST00000602133 IGF1RP08069 1367 aa14.95□□□□□ -0.02
ATP1A3-209ENST00000602133 HNRNPUQ00839 825 aaKnown RBP eCLIP14.95□□□□□ -0.02
ATP1A3-209ENST00000602133 TIMELESSQ9UNS1 1208 aa14.91□□□□□ -0.02
ATP1A3-209ENST00000602133 TONSLQ96HA7 1378 aa14.9□□□□□ -0.02
ATP1A3-209ENST00000602133 MAP3K1Q13233 1512 aa14.89□□□□□ -0.03
ATP1A3-209ENST00000602133 CARMIL1Q5VZK9 1371 aa14.88□□□□□ -0.03
ATP1A3-209ENST00000602133 CDK11AQ9UQ88 783 aaPredicted RBP14.88□□□□□ -0.03
ATP1A3-209ENST00000602133 PCF11O94913 1555 aaKnown RBP14.86□□□□□ -0.03
ATP1A3-209ENST00000602133 FANCIQ9NVI1 1328 aa14.86□□□□□ -0.03
ATP1A3-209ENST00000602133 CFTRP13569 1480 aa14.84□□□□□ -0.03
ATP1A3-209ENST00000602133 FHOD3Q2V2M9 1422 aa14.84□□□□□ -0.03
ATP1A3-209ENST00000602133 CCDC184Q52MB2 194 aa14.84□□□□□ -0.03
ATP1A3-209ENST00000602133 FHAD1B1AJZ9 1412 aa14.82□□□□□ -0.04
ATP1A3-209ENST00000602133 PTPRKQ15262 1439 aa14.8□□□□□ -0.04
ATP1A3-209ENST00000602133 NCAPD3P42695 1498 aa14.8□□□□□ -0.04
ATP1A3-209ENST00000602133 WASHC2AQ641Q2 1341 aa14.8□□□□□ -0.04
ATP1A3-209ENST00000602133 CCDC18Q5T9S5 1454 aa14.8□□□□□ -0.04
ATP1A3-209ENST00000602133 CFAP43Q8NDM7 1665 aa14.79□□□□□ -0.04
ATP1A3-209ENST00000602133 B4GALNT3Q6L9W6 998 aa14.79□□□□□ -0.04
ATP1A3-209ENST00000602133 ANO8Q9HCE9 1232 aaPredicted RBP14.78□□□□□ -0.04
ATP1A3-209ENST00000602133 AQRO60306 1485 aaKnown RBP eCLIP14.77□□□□□ -0.05
ATP1A3-209ENST00000602133 HSPA5P11021 654 aaKnown RBP14.77□□□□□ -0.05
ATP1A3-209ENST00000602133 HMGXB3Q12766 1538 aa14.76□□□□□ -0.05
ATP1A3-209ENST00000602133 FAM9BQ8IZU0 186 aa14.76□□□□□ -0.05
ATP1A3-209ENST00000602133 FGD5Q6ZNL6 1462 aa14.76□□□□□ -0.05
ATP1A3-209ENST00000602133 FGD6Q6ZV73 1430 aa14.75□□□□□ -0.05
ATP1A3-209ENST00000602133 PPP4R2Q9NY27 417 aa14.74□□□□□ -0.05
ATP1A3-209ENST00000602133 UACAQ9BZF9 1416 aa14.74□□□□□ -0.05
ATP1A3-209ENST00000602133 KDM5BQ9UGL1 1544 aa14.73□□□□□ -0.05
ATP1A3-209ENST00000602133 C11orf95C9JLR9 678 aaPredicted RBP14.71□□□□□ -0.05
ATP1A3-209ENST00000602133 HFM1A2PYH4 1435 aa14.71□□□□□ -0.05
ATP1A3-209ENST00000602133 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.71□□□□□ -0.05
ATP1A3-209ENST00000602133 RRP7BPQ9NSQ0 103 aa14.71□□□□□ -0.06
ATP1A3-209ENST00000602133 CHIC2Q9UKJ5 165 aa14.71□□□□□ -0.06
ATP1A3-209ENST00000602133 FYCO1Q9BQS8 1478 aa14.7□□□□□ -0.06
ATP1A3-209ENST00000602133 DEKP35659 375 aaKnown RBP14.7□□□□□ -0.06
ATP1A3-209ENST00000602133 NAIPQ13075 1403 aa14.7□□□□□ -0.06
ATP1A3-209ENST00000602133 CASKIN1Q8WXD9 1431 aa14.7□□□□□ -0.06
ATP1A3-209ENST00000602133 PTPN23Q9H3S7 1636 aa14.7□□□□□ -0.06
ATP1A3-209ENST00000602133 MTUS2Q5JR59 1369 aa14.69□□□□□ -0.06
ATP1A3-209ENST00000602133 NBR1Q14596 966 aa14.69□□□□□ -0.06
ATP1A3-209ENST00000602133 CNGB1Q14028 1251 aaPredicted RBP14.68□□□□□ -0.06
ATP1A3-209ENST00000602133 SENP3-EIF4A1A0A087X0R7 540 aa14.68□□□□□ -0.06
ATP1A3-209ENST00000602133 MRS2Q9HD23 443 aa14.68□□□□□ -0.06
ATP1A3-209ENST00000602133 PAK3O75914 559 aaPredicted RBP14.67□□□□□ -0.06
ATP1A3-209ENST00000602133 FOXD1Q16676 465 aa14.67□□□□□ -0.06
ATP1A3-209ENST00000602133 PRKRIP1Q9H875 184 aaPredicted RBP14.66□□□□□ -0.06
ATP1A3-209ENST00000602133 EIF4G2P78344 907 aaKnown RBP eCLIP14.66□□□□□ -0.06
ATP1A3-209ENST00000602133 RAD54L2Q9Y4B4 1467 aa14.65□□□□□ -0.06
ATP1A3-209ENST00000602133 ERICH6BQ5W0A0 696 aa14.64□□□□□ -0.07
ATP1A3-209ENST00000602133 CADPSQ9ULU8 1353 aa14.63□□□□□ -0.07
ATP1A3-209ENST00000602133 CNTLNQ9NXG0 1405 aa14.63□□□□□ -0.07
ATP1A3-209ENST00000602133 L3MBTL2Q969R5 705 aa14.62□□□□□ -0.07
ATP1A3-209ENST00000602133 DENND4BO75064 1496 aaPredicted RBP14.62□□□□□ -0.07
ATP1A3-209ENST00000602133 FMN1Q68DA7 1419 aa14.61□□□□□ -0.07
ATP1A3-209ENST00000602133 CCDC136Q96JN2 1154 aa14.61□□□□□ -0.07
ATP1A3-209ENST00000602133 NCOA2Q15596 1464 aa14.61□□□□□ -0.07
ATP1A3-209ENST00000602133 NOP58Q9Y2X3 529 aaKnown RBP14.61□□□□□ -0.07
ATP1A3-209ENST00000602133 ZBED9Q6R2W3 1325 aa14.61□□□□□ -0.07
ATP1A3-209ENST00000602133 SNAPC4Q5SXM2 1469 aa14.61□□□□□ -0.07
ATP1A3-209ENST00000602133 MYOM3Q5VTT5 1437 aa14.59□□□□□ -0.07
ATP1A3-209ENST00000602133 CCDC7Q96M83 1385 aa14.59□□□□□ -0.07
ATP1A3-209ENST00000602133 EFCAB5A4FU69 1503 aa14.58□□□□□ -0.07
ATP1A3-209ENST00000602133 AKNAQ7Z591 1439 aa14.58□□□□□ -0.08
ATP1A3-209ENST00000602133 PRDM2Q13029 1718 aa14.58□□□□□ -0.08
ATP1A3-209ENST00000602133 NBPF8Q3BBV2 869 aa14.57□□□□□ -0.08
ATP1A3-209ENST00000602133 KDM6BO15054 1643 aa14.56□□□□□ -0.08
ATP1A3-209ENST00000602133 LRRIQ1Q96JM4 1722 aa14.56□□□□□ -0.08
ATP1A3-209ENST00000602133 MPHOSPH9Q99550 1183 aa14.56□□□□□ -0.08
ATP1A3-209ENST00000602133 NCOA1Q15788 1441 aa14.55□□□□□ -0.08
ATP1A3-209ENST00000602133 SALL2Q9Y467 1007 aaPredicted RBP14.54□□□□□ -0.08
ATP1A3-209ENST00000602133 ARID3CA6NKF2 412 aa14.54□□□□□ -0.08
ATP1A3-209ENST00000602133 KIF7Q2M1P5 1343 aa14.54□□□□□ -0.08
ATP1A3-209ENST00000602133 MYT1LQ9UL68 1186 aa14.53□□□□□ -0.08
ATP1A3-209ENST00000602133 POLR3GLQ9BT43 218 aa14.53□□□□□ -0.08
ATP1A3-209ENST00000602133 FANCD2Q9BXW9 1451 aa14.52□□□□□ -0.09
ATP1A3-209ENST00000602133 POLA1P09884 1462 aaPredicted RBP14.51□□□□□ -0.09
ATP1A3-209ENST00000602133 CTTNBP2Q8WZ74 1663 aa14.5□□□□□ -0.09
ATP1A3-209ENST00000602133 MAGI3Q5TCQ9 1506 aa14.5□□□□□ -0.09
ATP1A3-209ENST00000602133 ABCA10Q8WWZ4 1543 aa14.5□□□□□ -0.09
ATP1A3-209ENST00000602133 GRIN2BQ13224 1484 aa14.48□□□□□ -0.09
ATP1A3-209ENST00000602133 SUPT6HQ7KZ85 1726 aaKnown RBP14.48□□□□□ -0.09
ATP1A3-209ENST00000602133 IPO9Q96P70 1041 aaKnown RBP14.47□□□□□ -0.09
ATP1A3-209ENST00000602133 TDRD9Q8NDG6 1382 aaKnown RBP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms