RNA–Protein interactions for RNA: ENST00000601803.5

DDX49-212, Transcript of DEAD-box helicase 49, humanhuman

TSL 2

Gene DDX49, Length 1,550 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-212ENST00000601803 LRRC9Q6ZRR7 1453 aa24.9■■□□□ 1.58
DDX49-212ENST00000601803 CFAP43Q8NDM7 1665 aa24.89■■□□□ 1.58
DDX49-212ENST00000601803 NEUROD1Q13562 356 aa24.89■■□□□ 1.58
DDX49-212ENST00000601803 POLA1P09884 1462 aaPredicted RBP24.88■■□□□ 1.57
DDX49-212ENST00000601803 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.85■■□□□ 1.57
DDX49-212ENST00000601803 FYCO1Q9BQS8 1478 aa24.84■■□□□ 1.57
DDX49-212ENST00000601803 WDR97A6NE52 1622 aa24.8■■□□□ 1.56
DDX49-212ENST00000601803 CTTNBP2Q8WZ74 1663 aa24.8■■□□□ 1.56
DDX49-212ENST00000601803 CASKIN1Q8WXD9 1431 aa24.79■■□□□ 1.56
DDX49-212ENST00000601803 RAD54L2Q9Y4B4 1467 aa24.76■■□□□ 1.55
DDX49-212ENST00000601803 PCF11O94913 1555 aaKnown RBP24.75■■□□□ 1.55
DDX49-212ENST00000601803 FMN1Q68DA7 1419 aa24.74■■□□□ 1.55
DDX49-212ENST00000601803 SETD5Q9C0A6 1442 aa24.74■■□□□ 1.55
DDX49-212ENST00000601803 PDS5BQ9NTI5 1447 aa24.73■■□□□ 1.55
DDX49-212ENST00000601803 MIER1Q8N108 512 aa24.7■■□□□ 1.54
DDX49-212ENST00000601803 TIMELESSQ9UNS1 1208 aa24.7■■□□□ 1.54
DDX49-212ENST00000601803 ABCA5Q8WWZ7 1642 aa24.7■■□□□ 1.54
DDX49-212ENST00000601803 RAB3GAP2Q9H2M9 1393 aa24.69■■□□□ 1.54
DDX49-212ENST00000601803 URB2Q14146 1524 aaKnown RBP24.68■■□□□ 1.54
DDX49-212ENST00000601803 NESP48681 1621 aa24.67■■□□□ 1.54
DDX49-212ENST00000601803 PHLDB1Q86UU1 1377 aa24.67■■□□□ 1.54
DDX49-212ENST00000601803 GTF3C3Q9Y5Q9 886 aa24.66■■□□□ 1.54
DDX49-212ENST00000601803 THOC2Q8NI27 1593 aaKnown RBP24.65■■□□□ 1.54
DDX49-212ENST00000601803 SAMD9Q5K651 1589 aa24.63■■□□□ 1.53
DDX49-212ENST00000601803 FHOD3Q2V2M9 1422 aa24.6■■□□□ 1.53
DDX49-212ENST00000601803 MAPKBP1O60336 1514 aa24.6■■□□□ 1.53
DDX49-212ENST00000601803 GAPVD1Q14C86 1478 aa24.6■■□□□ 1.53
DDX49-212ENST00000601803 KIF21AQ7Z4S6 1674 aa24.58■■□□□ 1.53
DDX49-212ENST00000601803 SNAPC4Q5SXM2 1469 aa24.58■■□□□ 1.52
DDX49-212ENST00000601803 FGD6Q6ZV73 1430 aa24.48■■□□□ 1.51
DDX49-212ENST00000601803 ITGAEP38570 1179 aa24.48■■□□□ 1.51
DDX49-212ENST00000601803 GRIN2BQ13224 1484 aa24.48■■□□□ 1.51
DDX49-212ENST00000601803 TARBP1Q13395 1621 aaKnown RBP24.47■■□□□ 1.51
DDX49-212ENST00000601803 FAM50AQ14320 339 aaKnown RBP24.47■■□□□ 1.51
DDX49-212ENST00000601803 P3H3Q8IVL6 736 aa24.46■■□□□ 1.51
DDX49-212ENST00000601803 CCDC18Q5T9S5 1454 aa24.44■■□□□ 1.5
DDX49-212ENST00000601803 TDRD9Q8NDG6 1382 aaKnown RBP24.43■■□□□ 1.5
DDX49-212ENST00000601803 EHBP1L1Q8N3D4 1523 aa24.43■■□□□ 1.5
DDX49-212ENST00000601803 MTUS2Q5JR59 1369 aa24.43■■□□□ 1.5
DDX49-212ENST00000601803 SUPT6HQ7KZ85 1726 aaKnown RBP24.39■■□□□ 1.5
DDX49-212ENST00000601803 HFM1A2PYH4 1435 aa24.39■■□□□ 1.49
DDX49-212ENST00000601803 ATP1B4Q9UN42 357 aaPredicted RBP24.38■■□□□ 1.49
DDX49-212ENST00000601803 MYOM3Q5VTT5 1437 aa24.38■■□□□ 1.49
DDX49-212ENST00000601803 YTHDC1Q96MU7 727 aaKnown RBP24.37■■□□□ 1.49
DDX49-212ENST00000601803 ARHGEF11O15085 1522 aa24.36■■□□□ 1.49
DDX49-212ENST00000601803 NCOA2Q15596 1464 aa24.34■■□□□ 1.49
DDX49-212ENST00000601803 PBRM1Q86U86 1689 aa24.33■■□□□ 1.49
DDX49-212ENST00000601803 UACAQ9BZF9 1416 aa24.32■■□□□ 1.48
DDX49-212ENST00000601803 HECW1Q76N89 1606 aa24.31■■□□□ 1.48
DDX49-212ENST00000601803 UGGT2Q9NYU1 1516 aa24.31■■□□□ 1.48
DDX49-212ENST00000601803 LRRIQ1Q96JM4 1722 aa24.3■■□□□ 1.48
DDX49-212ENST00000601803 MRC2Q9UBG0 1479 aa24.3■■□□□ 1.48
DDX49-212ENST00000601803 TCOF1Q13428 1488 aaKnown RBP24.3■■□□□ 1.48
DDX49-212ENST00000601803 ADAMTS12P58397 1594 aa24.29■■□□□ 1.48
DDX49-212ENST00000601803 IQGAP2Q13576 1575 aa24.29■■□□□ 1.48
DDX49-212ENST00000601803 AKNAQ7Z591 1439 aa24.29■■□□□ 1.48
DDX49-212ENST00000601803 PTPN23Q9H3S7 1636 aa24.28■■□□□ 1.48
DDX49-212ENST00000601803 PPP1R15AO75807 674 aaPredicted RBP24.26■■□□□ 1.47
DDX49-212ENST00000601803 MIA2Q96PC5 1412 aa24.24■■□□□ 1.47
DDX49-212ENST00000601803 IFT140Q96RY7 1462 aa24.22■■□□□ 1.47
DDX49-212ENST00000601803 NAIPQ13075 1403 aa24.21■■□□□ 1.47
DDX49-212ENST00000601803 SIN3AQ96ST3 1273 aa24.18■■□□□ 1.46
DDX49-212ENST00000601803 PTPRKQ15262 1439 aa24.18■■□□□ 1.46
DDX49-212ENST00000601803 EPRSP07814 1512 aaKnown RBP24.16■■□□□ 1.46
DDX49-212ENST00000601803 GCC2Q8IWJ2 1684 aa24.15■■□□□ 1.46
DDX49-212ENST00000601803 TONSLQ96HA7 1378 aa24.14■■□□□ 1.46
DDX49-212ENST00000601803 WDR62O43379 1518 aa24.14■■□□□ 1.45
DDX49-212ENST00000601803 MAGI3Q5TCQ9 1506 aa24.11■■□□□ 1.45
DDX49-212ENST00000601803 KIAA0586Q9BVV6 1533 aa24.11■■□□□ 1.45
DDX49-212ENST00000601803 CCER2I3L3R5 266 aa24.08■■□□□ 1.45
DDX49-212ENST00000601803 ROCK1Q13464 1354 aa24.04■■□□□ 1.44
DDX49-212ENST00000601803 DNAJC5BQ9UF47 199 aa24.02■■□□□ 1.44
DDX49-212ENST00000601803 KIAA0556O60303 1618 aa24.02■■□□□ 1.44
DDX49-212ENST00000601803 DDX10Q13206 875 aaKnown RBP23.97■■□□□ 1.43
DDX49-212ENST00000601803 CDK11AQ9UQ88 783 aaPredicted RBP23.96■■□□□ 1.43
DDX49-212ENST00000601803 DISP1Q96F81 1524 aa23.96■■□□□ 1.43
DDX49-212ENST00000601803 GRIN2AQ12879 1464 aa23.95■■□□□ 1.42
DDX49-212ENST00000601803 MAGI1Q96QZ7 1491 aaPredicted RBP23.95■■□□□ 1.42
DDX49-212ENST00000601803 KDM5BQ9UGL1 1544 aa23.94■■□□□ 1.42
DDX49-212ENST00000601803 ANP32CO43423 234 aa23.94■■□□□ 1.42
DDX49-212ENST00000601803 RAPGEF6Q8TEU7 1601 aa23.93■■□□□ 1.42
DDX49-212ENST00000601803 CDK13Q14004 1512 aaKnown RBP23.93■■□□□ 1.42
DDX49-212ENST00000601803 DNMT1P26358 1616 aaKnown RBP23.91■■□□□ 1.42
DDX49-212ENST00000601803 MYT1Q01538 1121 aa23.91■■□□□ 1.42
DDX49-212ENST00000601803 ZNF608Q9ULD9 1512 aaPredicted RBP23.9■■□□□ 1.42
DDX49-212ENST00000601803 SUPT16HQ9Y5B9 1047 aaKnown RBP23.9■■□□□ 1.42
DDX49-212ENST00000601803 DAPK1P53355 1430 aa23.88■■□□□ 1.41
DDX49-212ENST00000601803 EIF4G3O43432 1585 aaKnown RBP23.88■■□□□ 1.41
DDX49-212ENST00000601803 NUP153P49790 1475 aaKnown RBP23.88■■□□□ 1.41
DDX49-212ENST00000601803 DENND4BO75064 1496 aaPredicted RBP23.85■■□□□ 1.41
DDX49-212ENST00000601803 SYNJ2O15056 1496 aa23.83■■□□□ 1.41
DDX49-212ENST00000601803 MPHOSPH9Q99550 1183 aa23.83■■□□□ 1.41
DDX49-212ENST00000601803 RRP7BPQ9NSQ0 103 aa23.83■■□□□ 1.41
DDX49-212ENST00000601803 TROQ12816 1431 aaPredicted RBP23.82■■□□□ 1.4
DDX49-212ENST00000601803 ITSN2Q9NZM3 1697 aa23.82■■□□□ 1.4
DDX49-212ENST00000601803 ADCY10Q96PN6 1610 aa23.82■■□□□ 1.4
DDX49-212ENST00000601803 ABCC5O15440 1437 aa23.81■■□□□ 1.4
DDX49-212ENST00000601803 CARMIL2Q6F5E8 1435 aa23.79■■□□□ 1.4
DDX49-212ENST00000601803 TRIM52Q96A61 297 aa23.78■■□□□ 1.4
DDX49-212ENST00000601803 KDM6BO15054 1643 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 122.4 ms