RNA–Protein interactions for RNA: ENST00000601170.5

SMG9-211, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG9, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-211ENST00000601170 ABCA10Q8WWZ4 1543 aa21.19■□□□□ 0.98
SMG9-211ENST00000601170 FHAD1B1AJZ9 1412 aa21.19■□□□□ 0.98
SMG9-211ENST00000601170 TOPBP1Q92547 1522 aa21.19■□□□□ 0.98
SMG9-211ENST00000601170 POLA1P09884 1462 aaPredicted RBP21.18■□□□□ 0.98
SMG9-211ENST00000601170 CFAP43Q8NDM7 1665 aa21.18■□□□□ 0.98
SMG9-211ENST00000601170 PCF11O94913 1555 aaKnown RBP21.17■□□□□ 0.98
SMG9-211ENST00000601170 NESP48681 1621 aa21.15■□□□□ 0.98
SMG9-211ENST00000601170 RAB3GAP2Q9H2M9 1393 aa21.14■□□□□ 0.97
SMG9-211ENST00000601170 PHLDB1Q86UU1 1377 aa21.12■□□□□ 0.97
SMG9-211ENST00000601170 CUL7Q14999 1698 aa21.12■□□□□ 0.97
SMG9-211ENST00000601170 P3H3Q8IVL6 736 aa21.11■□□□□ 0.97
SMG9-211ENST00000601170 FHOD3Q2V2M9 1422 aa21.09■□□□□ 0.97
SMG9-211ENST00000601170 EFCAB5A4FU69 1503 aa21.09■□□□□ 0.97
SMG9-211ENST00000601170 CTTNBP2Q8WZ74 1663 aa21.09■□□□□ 0.97
SMG9-211ENST00000601170 MAPKBP1O60336 1514 aa21.07■□□□□ 0.96
SMG9-211ENST00000601170 FYCO1Q9BQS8 1478 aa21.06■□□□□ 0.96
SMG9-211ENST00000601170 SETD5Q9C0A6 1442 aa21.06■□□□□ 0.96
SMG9-211ENST00000601170 WDR97A6NE52 1622 aa21.04■□□□□ 0.96
SMG9-211ENST00000601170 ATP1B4Q9UN42 357 aaPredicted RBP21.04■□□□□ 0.96
SMG9-211ENST00000601170 LAMC3Q9Y6N6 1575 aa21.03■□□□□ 0.96
SMG9-211ENST00000601170 FAM50AQ14320 339 aaKnown RBP21.02■□□□□ 0.96
SMG9-211ENST00000601170 CASKIN1Q8WXD9 1431 aa21.01■□□□□ 0.95
SMG9-211ENST00000601170 URB2Q14146 1524 aaKnown RBP21.01■□□□□ 0.95
SMG9-211ENST00000601170 AQRO60306 1485 aaKnown RBP eCLIP21.01■□□□□ 0.952e-6■■■■■ 28.7
SMG9-211ENST00000601170 ABCA5Q8WWZ7 1642 aa20.96■□□□□ 0.95
SMG9-211ENST00000601170 FMN1Q68DA7 1419 aa20.94■□□□□ 0.94
SMG9-211ENST00000601170 SNAPC4Q5SXM2 1469 aa20.92■□□□□ 0.94
SMG9-211ENST00000601170 TDRD9Q8NDG6 1382 aaKnown RBP20.9■□□□□ 0.94
SMG9-211ENST00000601170 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.9■□□□□ 0.945e-6■■■■■ 46.2
SMG9-211ENST00000601170 SAMD9Q5K651 1589 aa20.89■□□□□ 0.94
SMG9-211ENST00000601170 GAPVD1Q14C86 1478 aa20.89■□□□□ 0.93
SMG9-211ENST00000601170 PDS5BQ9NTI5 1447 aa20.86■□□□□ 0.93
SMG9-211ENST00000601170 SIN3AQ96ST3 1273 aa20.86■□□□□ 0.93
SMG9-211ENST00000601170 LRRIQ1Q96JM4 1722 aa20.86■□□□□ 0.93
SMG9-211ENST00000601170 FGD6Q6ZV73 1430 aa20.85■□□□□ 0.93
SMG9-211ENST00000601170 KIF21AQ7Z4S6 1674 aa20.84■□□□□ 0.93
SMG9-211ENST00000601170 MTUS2Q5JR59 1369 aa20.83■□□□□ 0.92
SMG9-211ENST00000601170 GRIN2BQ13224 1484 aa20.79■□□□□ 0.92
SMG9-211ENST00000601170 THOC2Q8NI27 1593 aaKnown RBP20.78■□□□□ 0.92
SMG9-211ENST00000601170 DNAJC5BQ9UF47 199 aa20.78■□□□□ 0.92
SMG9-211ENST00000601170 TARBP1Q13395 1621 aaKnown RBP20.77■□□□□ 0.92
SMG9-211ENST00000601170 TIMELESSQ9UNS1 1208 aa20.77■□□□□ 0.91
SMG9-211ENST00000601170 NCOA2Q15596 1464 aa20.75■□□□□ 0.91
SMG9-211ENST00000601170 SUPT6HQ7KZ85 1726 aaKnown RBP20.74■□□□□ 0.91
SMG9-211ENST00000601170 CCDC18Q5T9S5 1454 aa20.74■□□□□ 0.91
SMG9-211ENST00000601170 EHBP1L1Q8N3D4 1523 aa20.73■□□□□ 0.91
SMG9-211ENST00000601170 PTPRKQ15262 1439 aa20.73■□□□□ 0.91
SMG9-211ENST00000601170 MYOM3Q5VTT5 1437 aa20.72■□□□□ 0.91
SMG9-211ENST00000601170 HFM1A2PYH4 1435 aa20.72■□□□□ 0.91
SMG9-211ENST00000601170 PTPN23Q9H3S7 1636 aa20.72■□□□□ 0.91
SMG9-211ENST00000601170 PBRM1Q86U86 1689 aa20.71■□□□□ 0.91
SMG9-211ENST00000601170 PPP1R15AO75807 674 aaPredicted RBP20.67■□□□□ 0.9
SMG9-211ENST00000601170 UACAQ9BZF9 1416 aa20.67■□□□□ 0.9
SMG9-211ENST00000601170 UGGT2Q9NYU1 1516 aa20.66■□□□□ 0.9
SMG9-211ENST00000601170 MAGI3Q5TCQ9 1506 aa20.66■□□□□ 0.9
SMG9-211ENST00000601170 DDX10Q13206 875 aaKnown RBP20.65■□□□□ 0.9
SMG9-211ENST00000601170 NAIPQ13075 1403 aa20.65■□□□□ 0.9
SMG9-211ENST00000601170 ARHGEF11O15085 1522 aa20.65■□□□□ 0.9
SMG9-211ENST00000601170 KCNH8Q96L42 1107 aa20.64■□□□□ 0.89
SMG9-211ENST00000601170 HECW1Q76N89 1606 aa20.63■□□□□ 0.89
SMG9-211ENST00000601170 IQGAP2Q13576 1575 aa20.63■□□□□ 0.89
SMG9-211ENST00000601170 ADAMTS12P58397 1594 aa20.62■□□□□ 0.89
SMG9-211ENST00000601170 TONSLQ96HA7 1378 aa20.62■□□□□ 0.89
SMG9-211ENST00000601170 HIRIP3Q9BW71 556 aaPredicted RBP20.59■□□□□ 0.89
SMG9-211ENST00000601170 SUPT16HQ9Y5B9 1047 aaKnown RBP20.59■□□□□ 0.89
SMG9-211ENST00000601170 TCOF1Q13428 1488 aaKnown RBP20.56■□□□□ 0.88
SMG9-211ENST00000601170 EPRSP07814 1512 aaKnown RBP20.56■□□□□ 0.88
SMG9-211ENST00000601170 MRC2Q9UBG0 1479 aa20.56■□□□□ 0.88
SMG9-211ENST00000601170 GCC2Q8IWJ2 1684 aa20.54■□□□□ 0.88
SMG9-211ENST00000601170 CDK13Q14004 1512 aaKnown RBP20.53■□□□□ 0.88
SMG9-211ENST00000601170 WDR62O43379 1518 aa20.52■□□□□ 0.88
SMG9-211ENST00000601170 RRP7BPQ9NSQ0 103 aa20.5■□□□□ 0.87
SMG9-211ENST00000601170 CHIC2Q9UKJ5 165 aa20.48■□□□□ 0.87
SMG9-211ENST00000601170 KDM5BQ9UGL1 1544 aa20.48■□□□□ 0.87
SMG9-211ENST00000601170 AKNAQ7Z591 1439 aa20.47■□□□□ 0.87
SMG9-211ENST00000601170 MIA2Q96PC5 1412 aa20.47■□□□□ 0.87
SMG9-211ENST00000601170 KDM6BO15054 1643 aa20.45■□□□□ 0.86
SMG9-211ENST00000601170 ZNF608Q9ULD9 1512 aaPredicted RBP20.45■□□□□ 0.86
SMG9-211ENST00000601170 ANP32CO43423 234 aa20.45■□□□□ 0.86
SMG9-211ENST00000601170 IFT140Q96RY7 1462 aa20.44■□□□□ 0.86
SMG9-211ENST00000601170 ARID3CA6NKF2 412 aa20.44■□□□□ 0.86
SMG9-211ENST00000601170 DENND4BO75064 1496 aaPredicted RBP20.44■□□□□ 0.86
SMG9-211ENST00000601170 CCER2I3L3R5 266 aa20.43■□□□□ 0.86
SMG9-211ENST00000601170 KIAA0556O60303 1618 aa20.41■□□□□ 0.86
SMG9-211ENST00000601170 TRIM52Q96A61 297 aa20.4■□□□□ 0.86
SMG9-211ENST00000601170 DISP1Q96F81 1524 aa20.39■□□□□ 0.85
SMG9-211ENST00000601170 KIAA0586Q9BVV6 1533 aa20.39■□□□□ 0.85
SMG9-211ENST00000601170 EIF4G3O43432 1585 aaKnown RBP20.34■□□□□ 0.85
SMG9-211ENST00000601170 RAPGEF6Q8TEU7 1601 aa20.34■□□□□ 0.85
SMG9-211ENST00000601170 NUP153P49790 1475 aaKnown RBP20.34■□□□□ 0.85
SMG9-211ENST00000601170 MPHOSPH9Q99550 1183 aa20.34■□□□□ 0.85
SMG9-211ENST00000601170 GRIN2AQ12879 1464 aa20.33■□□□□ 0.85
SMG9-211ENST00000601170 DAPK1P53355 1430 aa20.33■□□□□ 0.85
SMG9-211ENST00000601170 DNMT1P26358 1616 aaKnown RBP20.32■□□□□ 0.84
SMG9-211ENST00000601170 ROCK1Q13464 1354 aa20.3■□□□□ 0.84
SMG9-211ENST00000601170 ABCC5O15440 1437 aa20.28■□□□□ 0.84
SMG9-211ENST00000601170 HSPA5P11021 654 aaKnown RBP20.28■□□□□ 0.84
SMG9-211ENST00000601170 FOXD1Q16676 465 aa20.27■□□□□ 0.83
SMG9-211ENST00000601170 ZNF644Q9H582 1327 aaPredicted RBP20.26■□□□□ 0.83
SMG9-211ENST00000601170 FKBP8Q14318 412 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms