RNA–Protein interactions for RNA: ENST00000600729.1

MIA-RAB4B-201, Transcript of MIA-RAB4B readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 5 BASIC

Gene MIA-RAB4B, Length 1,229 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIA-RAB4B-201ENST00000600729 SPATA31D1Q6ZQQ2 1576 aa18.55■□□□□ 0.56
MIA-RAB4B-201ENST00000600729 ABCA5Q8WWZ7 1642 aa18.53■□□□□ 0.56
MIA-RAB4B-201ENST00000600729 GRIN2BQ13224 1484 aa18.52■□□□□ 0.56
MIA-RAB4B-201ENST00000600729 SHROOM2Q13796 1616 aa18.49■□□□□ 0.55
MIA-RAB4B-201ENST00000600729 ABCA10Q8WWZ4 1543 aa18.46■□□□□ 0.55
MIA-RAB4B-201ENST00000600729 BIVM-ERCC5R4GMW8 1640 aa18.41■□□□□ 0.54
MIA-RAB4B-201ENST00000600729 SUPT5HO00267 1087 aaKnown RBP18.4■□□□□ 0.54
MIA-RAB4B-201ENST00000600729 TOP2BQ02880 1626 aa18.4■□□□□ 0.54
MIA-RAB4B-201ENST00000600729 PPRC1Q5VV67 1664 aaKnown RBP18.39■□□□□ 0.53
MIA-RAB4B-201ENST00000600729 ADAMTS12P58397 1594 aa18.38■□□□□ 0.53
MIA-RAB4B-201ENST00000600729 ADCY10Q96PN6 1610 aa18.34■□□□□ 0.53
MIA-RAB4B-201ENST00000600729 GRIN2AQ12879 1464 aa18.33■□□□□ 0.53
MIA-RAB4B-201ENST00000600729 NUP160Q12769 1436 aa18.31■□□□□ 0.52
MIA-RAB4B-201ENST00000600729 NPM1P06748 294 aaKnown RBP eCLIP18.3■□□□□ 0.52
MIA-RAB4B-201ENST00000600729 WRNQ14191 1432 aaPredicted RBP eCLIP18.28■□□□□ 0.52
MIA-RAB4B-201ENST00000600729 COL17A1Q9UMD9 1497 aaPredicted RBP18.24■□□□□ 0.51
MIA-RAB4B-201ENST00000600729 ERICH3Q5RHP9 1530 aa18.22■□□□□ 0.51
MIA-RAB4B-201ENST00000600729 PRG4Q92954 1404 aaPredicted RBP18.22■□□□□ 0.51
MIA-RAB4B-201ENST00000600729 CERKQ8TCT0 537 aa18.2■□□□□ 0.5
MIA-RAB4B-201ENST00000600729 FHAD1B1AJZ9 1412 aa18.2■□□□□ 0.5
MIA-RAB4B-201ENST00000600729 PCF11O94913 1555 aaKnown RBP18.17■□□□□ 0.5
MIA-RAB4B-201ENST00000600729 RUSC2Q8N2Y8 1516 aa18.13■□□□□ 0.49
MIA-RAB4B-201ENST00000600729 GLI2P10070 1586 aa18.13■□□□□ 0.49
MIA-RAB4B-201ENST00000600729 KIF21BO75037 1637 aa18.1■□□□□ 0.49
MIA-RAB4B-201ENST00000600729 PTPRMP28827 1452 aa18.06■□□□□ 0.48
MIA-RAB4B-201ENST00000600729 MAP3K4Q9Y6R4 1608 aa18.04■□□□□ 0.48
MIA-RAB4B-201ENST00000600729 ADAMTSL3P82987 1691 aa18.01■□□□□ 0.47
MIA-RAB4B-201ENST00000600729 TEX14Q8IWB6 1497 aa18■□□□□ 0.47
MIA-RAB4B-201ENST00000600729 JPH4Q96JJ6 628 aa17.99■□□□□ 0.47
MIA-RAB4B-201ENST00000600729 CUL7Q14999 1698 aa17.96■□□□□ 0.47
MIA-RAB4B-201ENST00000600729 ASXL2Q76L83 1435 aa17.95■□□□□ 0.46
MIA-RAB4B-201ENST00000600729 IGF1RP08069 1367 aa17.94■□□□□ 0.46
MIA-RAB4B-201ENST00000600729 PLB1Q6P1J6 1458 aa17.94■□□□□ 0.46
MIA-RAB4B-201ENST00000600729 KIAA0586Q9BVV6 1533 aa17.91■□□□□ 0.46
MIA-RAB4B-201ENST00000600729 KIF27Q86VH2 1401 aa17.89■□□□□ 0.45
MIA-RAB4B-201ENST00000600729 ABCC2Q92887 1545 aa17.88■□□□□ 0.45
MIA-RAB4B-201ENST00000600729 HSPA2P54652 639 aa17.87■□□□□ 0.45
MIA-RAB4B-201ENST00000600729 MADDQ8WXG6 1647 aa17.86■□□□□ 0.45
MIA-RAB4B-201ENST00000600729 EPRSP07814 1512 aaKnown RBP17.85■□□□□ 0.45
MIA-RAB4B-201ENST00000600729 BCORL1Q5H9F3 1711 aa17.82■□□□□ 0.44
MIA-RAB4B-201ENST00000600729 CARMIL1Q5VZK9 1371 aa17.79■□□□□ 0.44
MIA-RAB4B-201ENST00000600729 RIMS1Q86UR5 1692 aaKnown RBP17.77■□□□□ 0.44
MIA-RAB4B-201ENST00000600729 IQGAP2Q13576 1575 aa17.77■□□□□ 0.44
MIA-RAB4B-201ENST00000600729 DISP1Q96F81 1524 aa17.73■□□□□ 0.43
MIA-RAB4B-201ENST00000600729 PTPRGP23470 1445 aa17.72■□□□□ 0.43
MIA-RAB4B-201ENST00000600729 MED1Q15648 1581 aaPredicted RBP17.7■□□□□ 0.42
MIA-RAB4B-201ENST00000600729 TNIKQ9UKE5 1360 aa17.69■□□□□ 0.42
MIA-RAB4B-201ENST00000600729 TTBK1Q5TCY1 1321 aaPredicted RBP17.69■□□□□ 0.42
MIA-RAB4B-201ENST00000600729 STRCQ7RTU9 1775 aa17.67■□□□□ 0.42
MIA-RAB4B-201ENST00000600729 CFAP43Q8NDM7 1665 aa17.66■□□□□ 0.42
MIA-RAB4B-201ENST00000600729 UGGT2Q9NYU1 1516 aa17.66■□□□□ 0.42
MIA-RAB4B-201ENST00000600729 KIAA0556O60303 1618 aa17.65■□□□□ 0.42
MIA-RAB4B-201ENST00000600729 UHRF1BP1LA0JNW5 1464 aa17.65■□□□□ 0.42
MIA-RAB4B-201ENST00000600729 ZCCHC11Q5TAX3 1644 aaKnown RBP17.65■□□□□ 0.42
MIA-RAB4B-201ENST00000600729 CARMIL2Q6F5E8 1435 aa17.64■□□□□ 0.42
MIA-RAB4B-201ENST00000600729 MAGI3Q5TCQ9 1506 aa17.64■□□□□ 0.41
MIA-RAB4B-201ENST00000600729 CTTNBP2Q8WZ74 1663 aa17.64■□□□□ 0.41
MIA-RAB4B-201ENST00000600729 RAPGEF2Q9Y4G8 1499 aa17.63■□□□□ 0.41
MIA-RAB4B-201ENST00000600729 IQSEC2Q5JU85 1478 aa17.62■□□□□ 0.41
MIA-RAB4B-201ENST00000600729 UACAQ9BZF9 1416 aa17.61■□□□□ 0.41
MIA-RAB4B-201ENST00000600729 KDM5BQ9UGL1 1544 aa17.6■□□□□ 0.41
MIA-RAB4B-201ENST00000600729 LTBP4Q8N2S1 1624 aa17.57■□□□□ 0.4
MIA-RAB4B-201ENST00000600729 ARAP3Q8WWN8 1544 aa17.57■□□□□ 0.4
MIA-RAB4B-201ENST00000600729 PREX1Q8TCU6 1659 aa17.56■□□□□ 0.4
MIA-RAB4B-201ENST00000600729 YEATS2Q9ULM3 1422 aa17.55■□□□□ 0.4
MIA-RAB4B-201ENST00000600729 CD109Q6YHK3 1445 aa17.55■□□□□ 0.4
MIA-RAB4B-201ENST00000600729 WDR7Q9Y4E6 1490 aa17.54■□□□□ 0.4
MIA-RAB4B-201ENST00000600729 PLPPR3Q6T4P5 718 aa17.51■□□□□ 0.39
MIA-RAB4B-201ENST00000600729 DMRT2Q9Y5R5 561 aa17.51■□□□□ 0.39
MIA-RAB4B-201ENST00000600729 ARID4BQ4LE39 1312 aaPredicted RBP17.5■□□□□ 0.39
MIA-RAB4B-201ENST00000600729 ABCA8O94911 1581 aa17.5■□□□□ 0.39
MIA-RAB4B-201ENST00000600729 PRXQ9BXM0 1461 aa17.49■□□□□ 0.39
MIA-RAB4B-201ENST00000600729 CHIC1Q5VXU3 224 aa17.48■□□□□ 0.39
MIA-RAB4B-201ENST00000600729 FER1L4A9Z1Z3 1794 aa17.46■□□□□ 0.39
MIA-RAB4B-201ENST00000600729 SRCAPQ6ZRS2 3230 aa17.43■□□□□ 0.38
MIA-RAB4B-201ENST00000600729 TTC37Q6PGP7 1564 aa17.43■□□□□ 0.38
MIA-RAB4B-201ENST00000600729 PTPRTO14522 1441 aa17.42■□□□□ 0.38
MIA-RAB4B-201ENST00000600729 FRMPD1Q5SYB0 1578 aa17.41■□□□□ 0.38
MIA-RAB4B-201ENST00000600729 PHF23Q9BUL5 403 aaPredicted RBP17.41■□□□□ 0.38
MIA-RAB4B-201ENST00000600729 ARHGEF40Q8TER5 1519 aa17.41■□□□□ 0.38
MIA-RAB4B-201ENST00000600729 GOLGA3Q08378 1498 aa17.39■□□□□ 0.37
MIA-RAB4B-201ENST00000600729 UBAP1LF5GYI3 381 aa17.38■□□□□ 0.37
MIA-RAB4B-201ENST00000600729 SIGLEC1Q9BZZ2 1709 aa17.36■□□□□ 0.37
MIA-RAB4B-201ENST00000600729 SAMD9Q5K651 1589 aa17.36■□□□□ 0.37
MIA-RAB4B-201ENST00000600729 RAPGEF3O95398 923 aa17.33■□□□□ 0.36
MIA-RAB4B-201ENST00000600729 SETD1BQ9UPS6 1966 aaKnown RBP17.33■□□□□ 0.36
MIA-RAB4B-201ENST00000600729 ATP10BO94823 1461 aa17.31■□□□□ 0.36
MIA-RAB4B-201ENST00000600729 HSPA1LP34931 641 aa17.3■□□□□ 0.36
MIA-RAB4B-201ENST00000600729 FANCAO15360 1455 aa17.3■□□□□ 0.36
MIA-RAB4B-201ENST00000600729 POGZQ7Z3K3 1410 aa17.3■□□□□ 0.36
MIA-RAB4B-201ENST00000600729 KCNH8Q96L42 1107 aa17.29■□□□□ 0.36
MIA-RAB4B-201ENST00000600729 ARID3CA6NKF2 412 aa17.28■□□□□ 0.36
MIA-RAB4B-201ENST00000600729 P3H3Q8IVL6 736 aa17.28■□□□□ 0.36
MIA-RAB4B-201ENST00000600729 ABCA9Q8IUA7 1624 aa17.28■□□□□ 0.36
MIA-RAB4B-201ENST00000600729 RAPGEF6Q8TEU7 1601 aa17.28■□□□□ 0.36
MIA-RAB4B-201ENST00000600729 PHLDB1Q86UU1 1377 aa17.28■□□□□ 0.36
MIA-RAB4B-201ENST00000600729 UHRF1BP1Q6BDS2 1440 aa17.25■□□□□ 0.35
MIA-RAB4B-201ENST00000600729 RICTORQ6R327 1708 aa17.23■□□□□ 0.35
MIA-RAB4B-201ENST00000600729 NUP153P49790 1475 aaKnown RBP17.21■□□□□ 0.35
MIA-RAB4B-201ENST00000600729 NEO1Q92859 1461 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms