RNA–Protein interactions for RNA: ENST00000600719.5

RAB11B-204, Transcript of RAB11B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB11B, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11B-204ENST00000600719 SHROOM2Q13796 1616 aa23.99■■□□□ 1.43
RAB11B-204ENST00000600719 CTTNBP2Q8WZ74 1663 aa23.99■■□□□ 1.43
RAB11B-204ENST00000600719 DNAJC5Q9H3Z4 198 aa23.99■■□□□ 1.43
RAB11B-204ENST00000600719 IQGAP2Q13576 1575 aa23.99■■□□□ 1.43
RAB11B-204ENST00000600719 JPH4Q96JJ6 628 aa23.96■■□□□ 1.43
RAB11B-204ENST00000600719 EHMT2Q96KQ7 1210 aa23.95■■□□□ 1.42
RAB11B-204ENST00000600719 UBTFP17480 764 aaKnown RBP23.92■■□□□ 1.42
RAB11B-204ENST00000600719 UGGT2Q9NYU1 1516 aa23.9■■□□□ 1.42
RAB11B-204ENST00000600719 PRG4Q92954 1404 aaPredicted RBP23.87■■□□□ 1.41
RAB11B-204ENST00000600719 ARHGEF11O15085 1522 aa23.86■■□□□ 1.41
RAB11B-204ENST00000600719 LOC105371045A0A1W2PR82 267 aa23.86■■□□□ 1.41
RAB11B-204ENST00000600719 ERCC6L2Q5T890 1561 aa23.86■■□□□ 1.41
RAB11B-204ENST00000600719 TNIKQ9UKE5 1360 aa23.85■■□□□ 1.41
RAB11B-204ENST00000600719 DISP1Q96F81 1524 aa23.83■■□□□ 1.41
RAB11B-204ENST00000600719 RIMBP3CA6NJZ7 1639 aa23.81■■□□□ 1.4
RAB11B-204ENST00000600719 RIMBP3BA6NNM3 1639 aa23.81■■□□□ 1.4
RAB11B-204ENST00000600719 RIMBP3Q9UFD9 1639 aa23.81■■□□□ 1.4
RAB11B-204ENST00000600719 CARMIL2Q6F5E8 1435 aa23.77■■□□□ 1.4
RAB11B-204ENST00000600719 SAMD9Q5K651 1589 aa23.75■■□□□ 1.39
RAB11B-204ENST00000600719 KIAA0556O60303 1618 aa23.75■■□□□ 1.39
RAB11B-204ENST00000600719 ARAP1Q96P48 1450 aa23.72■■□□□ 1.39
RAB11B-204ENST00000600719 EFCAB5A4FU69 1503 aa23.7■■□□□ 1.38
RAB11B-204ENST00000600719 RANGAP1P46060 587 aaPredicted RBP23.69■■□□□ 1.38
RAB11B-204ENST00000600719 ARHGAP35Q9NRY4 1499 aa23.67■■□□□ 1.38
RAB11B-204ENST00000600719 PTPRGP23470 1445 aa23.64■■□□□ 1.37
RAB11B-204ENST00000600719 CLIP1P30622 1438 aa23.63■■□□□ 1.37
RAB11B-204ENST00000600719 CEP162Q5TB80 1403 aa23.63■■□□□ 1.37
RAB11B-204ENST00000600719 P3H3Q8IVL6 736 aa23.63■■□□□ 1.37
RAB11B-204ENST00000600719 CYB5RLQ6IPT4 315 aa23.6■■□□□ 1.37
RAB11B-204ENST00000600719 FHOD3Q2V2M9 1422 aa23.59■■□□□ 1.37
RAB11B-204ENST00000600719 TTBK1Q5TCY1 1321 aaPredicted RBP23.53■■□□□ 1.36
RAB11B-204ENST00000600719 UACAQ9BZF9 1416 aa23.5■■□□□ 1.35
RAB11B-204ENST00000600719 PLB1Q6P1J6 1458 aa23.49■■□□□ 1.35
RAB11B-204ENST00000600719 ABCA8O94911 1581 aa23.49■■□□□ 1.35
RAB11B-204ENST00000600719 UHRF1BP1LA0JNW5 1464 aa23.48■■□□□ 1.35
RAB11B-204ENST00000600719 FMN1Q68DA7 1419 aa23.47■■□□□ 1.35
RAB11B-204ENST00000600719 ADCY10Q96PN6 1610 aa23.47■■□□□ 1.35
RAB11B-204ENST00000600719 ABCC2Q92887 1545 aa23.45■■□□□ 1.34
RAB11B-204ENST00000600719 RAPGEF6Q8TEU7 1601 aa23.41■■□□□ 1.34
RAB11B-204ENST00000600719 NUP153P49790 1475 aaKnown RBP23.36■■□□□ 1.33
RAB11B-204ENST00000600719 CASKIN1Q8WXD9 1431 aa23.36■■□□□ 1.33
RAB11B-204ENST00000600719 KDM5BQ9UGL1 1544 aa23.36■■□□□ 1.33
RAB11B-204ENST00000600719 PCF11O94913 1555 aaKnown RBP23.33■■□□□ 1.33
RAB11B-204ENST00000600719 VPS8Q8N3P4 1428 aa23.33■■□□□ 1.32
RAB11B-204ENST00000600719 FYCO1Q9BQS8 1478 aa23.31■■□□□ 1.32
RAB11B-204ENST00000600719 ATP10BO94823 1461 aa23.3■■□□□ 1.32
RAB11B-204ENST00000600719 HECW1Q76N89 1606 aa23.3■■□□□ 1.32
RAB11B-204ENST00000600719 ZCCHC11Q5TAX3 1644 aaKnown RBP23.29■■□□□ 1.32
RAB11B-204ENST00000600719 NPM1P06748 294 aaKnown RBP eCLIP23.28■■□□□ 1.32
RAB11B-204ENST00000600719 EPRSP07814 1512 aaKnown RBP23.26■■□□□ 1.31
RAB11B-204ENST00000600719 LRRIQ1Q96JM4 1722 aa23.25■■□□□ 1.31
RAB11B-204ENST00000600719 MAPKBP1O60336 1514 aa23.24■■□□□ 1.31
RAB11B-204ENST00000600719 ARID3CA6NKF2 412 aa23.24■■□□□ 1.31
RAB11B-204ENST00000600719 ATP1B4Q9UN42 357 aaPredicted RBP23.23■■□□□ 1.31
RAB11B-204ENST00000600719 CDK13Q14004 1512 aaKnown RBP23.22■■□□□ 1.31
RAB11B-204ENST00000600719 CCDC18Q5T9S5 1454 aa23.19■■□□□ 1.3
RAB11B-204ENST00000600719 ASXL2Q76L83 1435 aa23.18■■□□□ 1.3
RAB11B-204ENST00000600719 WDR7Q9Y4E6 1490 aa23.13■■□□□ 1.29
RAB11B-204ENST00000600719 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.13■■□□□ 1.29
RAB11B-204ENST00000600719 HNRNPUL2Q1KMD3 747 aaKnown RBP23.13■■□□□ 1.29
RAB11B-204ENST00000600719 MAP3K1Q13233 1512 aa23.1■■□□□ 1.29
RAB11B-204ENST00000600719 PLEKHD1A6NEE1 506 aa23.09■■□□□ 1.29
RAB11B-204ENST00000600719 MAGI3Q5TCQ9 1506 aa23.08■■□□□ 1.29
RAB11B-204ENST00000600719 CDK11AQ9UQ88 783 aaPredicted RBP23.08■■□□□ 1.29
RAB11B-204ENST00000600719 ABCC10Q5T3U5 1492 aa23.08■■□□□ 1.29
RAB11B-204ENST00000600719 TIAM1Q13009 1591 aa23.08■■□□□ 1.29
RAB11B-204ENST00000600719 CFAP43Q8NDM7 1665 aa23.08■■□□□ 1.29
RAB11B-204ENST00000600719 TROQ12816 1431 aaPredicted RBP23.05■■□□□ 1.28
RAB11B-204ENST00000600719 DIP2BQ9P265 1576 aa23.05■■□□□ 1.28
RAB11B-204ENST00000600719 GLI2P10070 1586 aa23.02■■□□□ 1.28
RAB11B-204ENST00000600719 KCNH8Q96L42 1107 aa23.01■■□□□ 1.27
RAB11B-204ENST00000600719 KIF13AQ9H1H9 1805 aa23■■□□□ 1.27
RAB11B-204ENST00000600719 LRRC9Q6ZRR7 1453 aa22.98■■□□□ 1.27
RAB11B-204ENST00000600719 FAM69CQ0P6D2 419 aa22.98■■□□□ 1.27
RAB11B-204ENST00000600719 MTUS2Q5JR59 1369 aa22.98■■□□□ 1.27
RAB11B-204ENST00000600719 APLP2Q06481 763 aa22.97■■□□□ 1.27
RAB11B-204ENST00000600719 KANK4Q5T7N3 995 aaPredicted RBP22.97■■□□□ 1.27
RAB11B-204ENST00000600719 EHBP1L1Q8N3D4 1523 aa22.97■■□□□ 1.27
RAB11B-204ENST00000600719 KIF14Q15058 1648 aa22.96■■□□□ 1.27
RAB11B-204ENST00000600719 ABCA9Q8IUA7 1624 aa22.95■■□□□ 1.26
RAB11B-204ENST00000600719 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.94■■□□□ 1.26
RAB11B-204ENST00000600719 TRHP20396 242 aaPredicted RBP22.94■■□□□ 1.26
RAB11B-204ENST00000600719 MAP3K4Q9Y6R4 1608 aa22.93■■□□□ 1.26
RAB11B-204ENST00000600719 TTC37Q6PGP7 1564 aa22.9■■□□□ 1.26
RAB11B-204ENST00000600719 CD109Q6YHK3 1445 aa22.87■■□□□ 1.25
RAB11B-204ENST00000600719 SUPT6HQ7KZ85 1726 aaKnown RBP22.85■■□□□ 1.25
RAB11B-204ENST00000600719 NCOA2Q15596 1464 aa22.85■■□□□ 1.25
RAB11B-204ENST00000600719 PPRC1Q5VV67 1664 aaKnown RBP22.83■■□□□ 1.24
RAB11B-204ENST00000600719 PLCH2O75038 1416 aa22.82■■□□□ 1.24
RAB11B-204ENST00000600719 GPATCH8Q9UKJ3 1502 aaKnown RBP22.8■■□□□ 1.24
RAB11B-204ENST00000600719 ARAP3Q8WWN8 1544 aa22.79■■□□□ 1.24
RAB11B-204ENST00000600719 MYO5CQ9NQX4 1742 aa22.79■■□□□ 1.24
RAB11B-204ENST00000600719 CDC42BPAQ5VT25 1732 aa22.78■■□□□ 1.24
RAB11B-204ENST00000600719 TSPOAP1O95153 1857 aa22.77■■□□□ 1.24
RAB11B-204ENST00000600719 PREX2Q70Z35 1606 aa22.77■■□□□ 1.24
RAB11B-204ENST00000600719 CCNB3Q8WWL7 1395 aa22.76■■□□□ 1.23
RAB11B-204ENST00000600719 CDC42BPBQ9Y5S2 1711 aa22.75■■□□□ 1.23
RAB11B-204ENST00000600719 PPARGC1BQ86YN6 1023 aaKnown RBP22.75■■□□□ 1.23
RAB11B-204ENST00000600719 TEX14Q8IWB6 1497 aa22.74■■□□□ 1.23
RAB11B-204ENST00000600719 PHLDB1Q86UU1 1377 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms