RNA–Protein interactions for RNA: ENST00000600610.5

GTPBP3-221, Transcript of GTP binding protein 3, mitochondrial, human

TSL 1 (best)

Gene GTPBP3, Length 1,105 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GTPBP3-221	ENST00000600610	PRX	Q9BXM0	1461 aa		34.35	■■■■□ 3.09
GTPBP3-221	ENST00000600610	ARAP1	Q96P48	1450 aa		34.3	■■■■□ 3.08
GTPBP3-221	ENST00000600610	CYB5RL	Q6IPT4	315 aa		34.29	■■■■□ 3.08
GTPBP3-221	ENST00000600610	SHROOM2	Q13796	1616 aa		34.29	■■■■□ 3.08
GTPBP3-221	ENST00000600610	KIAA0586	Q9BVV6	1533 aa		34.2	■■■■□ 3.07
GTPBP3-221	ENST00000600610	JPH4	Q96JJ6	628 aa		34.2	■■■■□ 3.07
GTPBP3-221	ENST00000600610	KIF21B	O75037	1637 aa		34.19	■■■■□ 3.06
GTPBP3-221	ENST00000600610	FAM9A	Q8IZU1	332 aa	Predicted RBP	34.17	■■■■□ 3.06
GTPBP3-221	ENST00000600610	ERCC6L2	Q5T890	1561 aa		34.11	■■■■□ 3.05
GTPBP3-221	ENST00000600610	PRG4	Q92954	1404 aa	Predicted RBP	34.1	■■■■□ 3.05
GTPBP3-221	ENST00000600610	CTTNBP2	Q8WZ74	1663 aa		34.09	■■■■□ 3.05
GTPBP3-221	ENST00000600610	IQGAP2	Q13576	1575 aa		34.03	■■■■□ 3.04
GTPBP3-221	ENST00000600610	GOLGA3	Q08378	1498 aa		33.97	■■■■□ 3.03
GTPBP3-221	ENST00000600610	UGGT2	Q9NYU1	1516 aa		33.89	■■■■□ 3.02
GTPBP3-221	ENST00000600610	CARMIL2	Q6F5E8	1435 aa		33.86	■■■■□ 3.01
GTPBP3-221	ENST00000600610	UBTF	P17480	764 aa	Known RBP	33.78	■■■■□ 3
GTPBP3-221	ENST00000600610	TNIK	Q9UKE5	1360 aa		33.73	■■■□□ 2.99
GTPBP3-221	ENST00000600610	DISP1	Q96F81	1524 aa		33.73	■■■□□ 2.99
GTPBP3-221	ENST00000600610	PTPRG	P23470	1445 aa		33.7	■■■□□ 2.99
GTPBP3-221	ENST00000600610	KIAA0556	O60303	1618 aa		33.68	■■■□□ 2.98
GTPBP3-221	ENST00000600610	SAMD9	Q5K651	1589 aa		33.64	■■■□□ 2.98
GTPBP3-221	ENST00000600610	EFCAB5	A4FU69	1503 aa		33.62	■■■□□ 2.97
GTPBP3-221	ENST00000600610	TRH	P20396	242 aa	Predicted RBP	33.61	■■■□□ 2.97
GTPBP3-221	ENST00000600610	ADCY10	Q96PN6	1610 aa		33.58	■■■□□ 2.97
GTPBP3-221	ENST00000600610	NPM1	P06748	294 aa	Known RBP eCLIP	33.58	■■■□□ 2.97
GTPBP3-221	ENST00000600610	EHMT2	Q96KQ7	1210 aa		33.56	■■■□□ 2.96
GTPBP3-221	ENST00000600610	TTBK1	Q5TCY1	1321 aa	Predicted RBP	33.53	■■■□□ 2.96
GTPBP3-221	ENST00000600610	UHRF1BP1L	A0JNW5	1464 aa		33.49	■■■□□ 2.95
GTPBP3-221	ENST00000600610	UACA	Q9BZF9	1416 aa		33.48	■■■□□ 2.95
GTPBP3-221	ENST00000600610	MAPKBP1	O60336	1514 aa		33.43	■■■□□ 2.94
GTPBP3-221	ENST00000600610	ABCC2	Q92887	1545 aa		33.42	■■■□□ 2.94
GTPBP3-221	ENST00000600610	ARHGAP35	Q9NRY4	1499 aa		33.38	■■■□□ 2.93
GTPBP3-221	ENST00000600610	LOC105371045	A0A1W2PR82	267 aa		33.37	■■■□□ 2.93
GTPBP3-221	ENST00000600610	RANGAP1	P46060	587 aa	Predicted RBP	33.36	■■■□□ 2.93
GTPBP3-221	ENST00000600610	P3H3	Q8IVL6	736 aa		33.34	■■■□□ 2.93
GTPBP3-221	ENST00000600610	CLIP1	P30622	1438 aa		33.33	■■■□□ 2.93
GTPBP3-221	ENST00000600610	KDM5B	Q9UGL1	1544 aa		33.31	■■■□□ 2.92
GTPBP3-221	ENST00000600610	ABCA8	O94911	1581 aa		33.3	■■■□□ 2.92
GTPBP3-221	ENST00000600610	FHOD3	Q2V2M9	1422 aa		33.3	■■■□□ 2.92
GTPBP3-221	ENST00000600610	KIF13A	Q9H1H9	1805 aa		33.29	■■■□□ 2.92
GTPBP3-221	ENST00000600610	PLB1	Q6P1J6	1458 aa		33.29	■■■□□ 2.92
GTPBP3-221	ENST00000600610	FMN1	Q68DA7	1419 aa		33.28	■■■□□ 2.92
GTPBP3-221	ENST00000600610	ABCC10	Q5T3U5	1492 aa		33.28	■■■□□ 2.92
GTPBP3-221	ENST00000600610	CEP162	Q5TB80	1403 aa		33.26	■■■□□ 2.91
GTPBP3-221	ENST00000600610	RAPGEF6	Q8TEU7	1601 aa		33.22	■■■□□ 2.91
GTPBP3-221	ENST00000600610	ZCCHC11	Q5TAX3	1644 aa	Known RBP	33.21	■■■□□ 2.91
GTPBP3-221	ENST00000600610	FAM69C	Q0P6D2	419 aa		33.2	■■■□□ 2.91
GTPBP3-221	ENST00000600610	DIP2B	Q9P265	1576 aa		33.2	■■■□□ 2.91
GTPBP3-221	ENST00000600610	ASXL2	Q76L83	1435 aa		33.19	■■■□□ 2.9
GTPBP3-221	ENST00000600610	GLI2	P10070	1586 aa		33.06	■■■□□ 2.88
GTPBP3-221	ENST00000600610	HECW1	Q76N89	1606 aa		33.06	■■■□□ 2.88
GTPBP3-221	ENST00000600610	NUP153	P49790	1475 aa	Known RBP	33.04	■■■□□ 2.88
GTPBP3-221	ENST00000600610	CASKIN1	Q8WXD9	1431 aa		33.02	■■■□□ 2.88
GTPBP3-221	ENST00000600610	ATP10B	O94823	1461 aa		33.02	■■■□□ 2.88
GTPBP3-221	ENST00000600610	WDR7	Q9Y4E6	1490 aa		33.02	■■■□□ 2.88
GTPBP3-221	ENST00000600610	EPRS	P07814	1512 aa	Known RBP	33.01	■■■□□ 2.87
GTPBP3-221	ENST00000600610	FYCO1	Q9BQS8	1478 aa		32.98	■■■□□ 2.87
GTPBP3-221	ENST00000600610	TSPOAP1	O95153	1857 aa		32.93	■■■□□ 2.86
GTPBP3-221	ENST00000600610	PCF11	O94913	1555 aa	Known RBP	32.93	■■■□□ 2.86
GTPBP3-221	ENST00000600610	ARID3C	A6NKF2	412 aa		32.9	■■■□□ 2.86
GTPBP3-221	ENST00000600610	CCDC18	Q5T9S5	1454 aa		32.9	■■■□□ 2.86
GTPBP3-221	ENST00000600610	VPS8	Q8N3P4	1428 aa		32.89	■■■□□ 2.86
GTPBP3-221	ENST00000600610	MAP3K4	Q9Y6R4	1608 aa		32.88	■■■□□ 2.85
GTPBP3-221	ENST00000600610	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	32.86	■■■□□ 2.85
GTPBP3-221	ENST00000600610	HNRNPUL2	Q1KMD3	747 aa	Known RBP	32.86	■■■□□ 2.85
GTPBP3-221	ENST00000600610	KCNH8	Q96L42	1107 aa		32.85	■■■□□ 2.85
GTPBP3-221	ENST00000600610	CDK11A	Q9UQ88	783 aa	Predicted RBP	32.85	■■■□□ 2.85
GTPBP3-221	ENST00000600610	LRRIQ1	Q96JM4	1722 aa		32.85	■■■□□ 2.85
GTPBP3-221	ENST00000600610	ATP1B4	Q9UN42	357 aa	Predicted RBP	32.84	■■■□□ 2.85
GTPBP3-221	ENST00000600610	PLEKHD1	A6NEE1	506 aa		32.81	■■■□□ 2.84
GTPBP3-221	ENST00000600610	PPRC1	Q5VV67	1664 aa	Known RBP	32.81	■■■□□ 2.84
GTPBP3-221	ENST00000600610	CFAP43	Q8NDM7	1665 aa		32.81	■■■□□ 2.84
GTPBP3-221	ENST00000600610	CDK13	Q14004	1512 aa	Known RBP	32.77	■■■□□ 2.84
GTPBP3-221	ENST00000600610	TEX14	Q8IWB6	1497 aa		32.75	■■■□□ 2.83
GTPBP3-221	ENST00000600610	CD109	Q6YHK3	1445 aa		32.74	■■■□□ 2.83
GTPBP3-221	ENST00000600610	MAGI3	Q5TCQ9	1506 aa		32.71	■■■□□ 2.83
GTPBP3-221	ENST00000600610	KDM6B	O15054	1643 aa		32.69	■■■□□ 2.82
GTPBP3-221	ENST00000600610	ABCA9	Q8IUA7	1624 aa		32.69	■■■□□ 2.82
GTPBP3-221	ENST00000600610	MAP3K1	Q13233	1512 aa		32.69	■■■□□ 2.82
GTPBP3-221	ENST00000600610	TRO	Q12816	1431 aa	Predicted RBP	32.64	■■■□□ 2.82
GTPBP3-221	ENST00000600610	TIAM1	Q13009	1591 aa		32.59	■■■□□ 2.81
GTPBP3-221	ENST00000600610	KIF14	Q15058	1648 aa		32.55	■■■□□ 2.8
GTPBP3-221	ENST00000600610	APLP2	Q06481	763 aa		32.55	■■■□□ 2.8
GTPBP3-221	ENST00000600610	PHLDB1	Q86UU1	1377 aa		32.52	■■■□□ 2.8
GTPBP3-221	ENST00000600610	EHBP1L1	Q8N3D4	1523 aa		32.51	■■■□□ 2.8
GTPBP3-221	ENST00000600610	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	32.51	■■■□□ 2.8
GTPBP3-221	ENST00000600610	MTUS2	Q5JR59	1369 aa		32.51	■■■□□ 2.79
GTPBP3-221	ENST00000600610	COL17A1	Q9UMD9	1497 aa	Predicted RBP	32.48	■■■□□ 2.79
GTPBP3-221	ENST00000600610	NEO1	Q92859	1461 aa		32.45	■■■□□ 2.79
GTPBP3-221	ENST00000600610	LRRC9	Q6ZRR7	1453 aa		32.43	■■■□□ 2.78
GTPBP3-221	ENST00000600610	ARAP3	Q8WWN8	1544 aa		32.43	■■■□□ 2.78
GTPBP3-221	ENST00000600610	TTC37	Q6PGP7	1564 aa		32.43	■■■□□ 2.78
GTPBP3-221	ENST00000600610	MYO5C	Q9NQX4	1742 aa		32.43	■■■□□ 2.78
GTPBP3-221	ENST00000600610	SUPT6H	Q7KZ85	1726 aa	Known RBP	32.4	■■■□□ 2.78
GTPBP3-221	ENST00000600610	PLCH2	O75038	1416 aa		32.37	■■■□□ 2.77
GTPBP3-221	ENST00000600610	CFAP74	Q9C0B2	1584 aa		32.36	■■■□□ 2.77
GTPBP3-221	ENST00000600610	FANCA	O15360	1455 aa		32.33	■■■□□ 2.77
GTPBP3-221	ENST00000600610	CDC42BPA	Q5VT25	1732 aa		32.31	■■■□□ 2.76
GTPBP3-221	ENST00000600610	PREX2	Q70Z35	1606 aa		32.29	■■■□□ 2.76
GTPBP3-221	ENST00000600610	AKNA	Q7Z591	1439 aa		32.29	■■■□□ 2.76

Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms