RNA–Protein interactions for RNA: ENST00000600252.5

SYDE1-203, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

TSL 2 BASIC

Gene SYDE1, Length 3,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-203ENST00000600252 MYT1LQ9UL68 1186 aa18.73■□□□□ 0.59
SYDE1-203ENST00000600252 ZEB1P37275 1124 aaPredicted RBP18.72■□□□□ 0.59
SYDE1-203ENST00000600252 KIF21AQ7Z4S6 1674 aa18.7■□□□□ 0.58
SYDE1-203ENST00000600252 ZNF608Q9ULD9 1512 aaPredicted RBP18.68■□□□□ 0.58
SYDE1-203ENST00000600252 IFT140Q96RY7 1462 aa18.68■□□□□ 0.58
SYDE1-203ENST00000600252 ZNF777Q9ULD5 760 aaPredicted RBP18.67■□□□□ 0.58
SYDE1-203ENST00000600252 PRKCSHP14314 528 aaPredicted RBP18.67■□□□□ 0.58
SYDE1-203ENST00000600252 BIVM-ERCC5R4GMW8 1640 aa18.65■□□□□ 0.58
SYDE1-203ENST00000600252 ABCA10Q8WWZ4 1543 aa18.65■□□□□ 0.58
SYDE1-203ENST00000600252 JPH4Q96JJ6 628 aa18.65■□□□□ 0.58
SYDE1-203ENST00000600252 CDK11AQ9UQ88 783 aaPredicted RBP18.65■□□□□ 0.58
SYDE1-203ENST00000600252 GRIN2BQ13224 1484 aa18.64■□□□□ 0.57
SYDE1-203ENST00000600252 FHOD3Q2V2M9 1422 aa18.64■□□□□ 0.57
SYDE1-203ENST00000600252 MTUS2Q5JR59 1369 aa18.63■□□□□ 0.57
SYDE1-203ENST00000600252 NEUROD1Q13562 356 aa18.62■□□□□ 0.57
SYDE1-203ENST00000600252 PRXQ9BXM0 1461 aa18.61■□□□□ 0.57
SYDE1-203ENST00000600252 KCNH8Q96L42 1107 aa18.59■□□□□ 0.57
SYDE1-203ENST00000600252 KANK4Q5T7N3 995 aaPredicted RBP18.58■□□□□ 0.56
SYDE1-203ENST00000600252 FHAD1B1AJZ9 1412 aa18.58■□□□□ 0.56
SYDE1-203ENST00000600252 SNAPC4Q5SXM2 1469 aa18.58■□□□□ 0.56
SYDE1-203ENST00000600252 VPS8Q8N3P4 1428 aa18.57■□□□□ 0.56
SYDE1-203ENST00000600252 NPM1P06748 294 aaKnown RBP eCLIP18.57■□□□□ 0.56
SYDE1-203ENST00000600252 KIF21BO75037 1637 aa18.52■□□□□ 0.56
SYDE1-203ENST00000600252 PLEKHD1A6NEE1 506 aa18.5■□□□□ 0.55
SYDE1-203ENST00000600252 CARMIL2Q6F5E8 1435 aa18.49■□□□□ 0.55
SYDE1-203ENST00000600252 PRDM2Q13029 1718 aa18.49■□□□□ 0.55
SYDE1-203ENST00000600252 CHIC2Q9UKJ5 165 aa18.49■□□□□ 0.55
SYDE1-203ENST00000600252 OSCARQ8IYS5 282 aa18.48■□□□□ 0.55
SYDE1-203ENST00000600252 ERICH3Q5RHP9 1530 aa18.47■□□□□ 0.55
SYDE1-203ENST00000600252 TRIM52Q96A61 297 aa18.44■□□□□ 0.54
SYDE1-203ENST00000600252 FMN1Q68DA7 1419 aa18.42■□□□□ 0.54
SYDE1-203ENST00000600252 WDR62O43379 1518 aa18.41■□□□□ 0.54
SYDE1-203ENST00000600252 ARAP1Q96P48 1450 aa18.41■□□□□ 0.54
SYDE1-203ENST00000600252 ARHGAP35Q9NRY4 1499 aa18.39■□□□□ 0.54
SYDE1-203ENST00000600252 PTPRGP23470 1445 aa18.35■□□□□ 0.53
SYDE1-203ENST00000600252 CYB5RLQ6IPT4 315 aa18.34■□□□□ 0.53
SYDE1-203ENST00000600252 CFDP1Q9UEE9 299 aaPredicted RBP18.33■□□□□ 0.53
SYDE1-203ENST00000600252 SYNJ2O15056 1496 aa18.33■□□□□ 0.52
SYDE1-203ENST00000600252 GRIN2AQ12879 1464 aa18.33■□□□□ 0.52
SYDE1-203ENST00000600252 RRP7BPQ9NSQ0 103 aa18.31■□□□□ 0.52
SYDE1-203ENST00000600252 PRG4Q92954 1404 aaPredicted RBP18.31■□□□□ 0.52
SYDE1-203ENST00000600252 MAGI1Q96QZ7 1491 aaPredicted RBP18.3■□□□□ 0.52
SYDE1-203ENST00000600252 CUL7Q14999 1698 aa18.3■□□□□ 0.52
SYDE1-203ENST00000600252 EIF4G3O43432 1585 aaKnown RBP18.28■□□□□ 0.52
SYDE1-203ENST00000600252 ANP32EQ9BTT0 268 aa18.26■□□□□ 0.51
SYDE1-203ENST00000600252 KIAA0586Q9BVV6 1533 aa18.26■□□□□ 0.51
SYDE1-203ENST00000600252 DIEXFQ68CQ4 756 aaKnown RBP18.26■□□□□ 0.51
SYDE1-203ENST00000600252 TARBP1Q13395 1621 aaKnown RBP18.26■□□□□ 0.51
SYDE1-203ENST00000600252 TSPY4P0CV99 314 aa18.23■□□□□ 0.51
SYDE1-203ENST00000600252 TSPY10P0CW01 314 aa18.23■□□□□ 0.51
SYDE1-203ENST00000600252 CCNB3Q8WWL7 1395 aa18.23■□□□□ 0.51
SYDE1-203ENST00000600252 THOC2Q8NI27 1593 aaKnown RBP18.22■□□□□ 0.51
SYDE1-203ENST00000600252 IQGAP2Q13576 1575 aa18.21■□□□□ 0.51
SYDE1-203ENST00000600252 ABCA5Q8WWZ7 1642 aa18.2■□□□□ 0.5
SYDE1-203ENST00000600252 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.17■□□□□ 0.5
SYDE1-203ENST00000600252 ADAMTS12P58397 1594 aa18.16■□□□□ 0.5
SYDE1-203ENST00000600252 CASKIN1Q8WXD9 1431 aa18.13■□□□□ 0.49
SYDE1-203ENST00000600252 EFCAB5A4FU69 1503 aa18.13■□□□□ 0.49
SYDE1-203ENST00000600252 PBRM1Q86U86 1689 aa18.12■□□□□ 0.49
SYDE1-203ENST00000600252 TRHP20396 242 aaPredicted RBP18.1■□□□□ 0.49
SYDE1-203ENST00000600252 PLB1Q6P1J6 1458 aa18.1■□□□□ 0.49
SYDE1-203ENST00000600252 HNRNPMP52272 730 aaKnown RBP eCLIP18.07■□□□□ 0.48
SYDE1-203ENST00000600252 PHLDB1Q86UU1 1377 aa18.07■□□□□ 0.48
SYDE1-203ENST00000600252 ZNF644Q9H582 1327 aaPredicted RBP18.06■□□□□ 0.48
SYDE1-203ENST00000600252 ZNF326Q5BKZ1 582 aaKnown RBP18.06■□□□□ 0.48
SYDE1-203ENST00000600252 CCDC18Q5T9S5 1454 aa18.06■□□□□ 0.48
SYDE1-203ENST00000600252 LRRC9Q6ZRR7 1453 aa18.06■□□□□ 0.48
SYDE1-203ENST00000600252 FYCO1Q9BQS8 1478 aa18.05■□□□□ 0.48
SYDE1-203ENST00000600252 CDK13Q14004 1512 aaKnown RBP18.05■□□□□ 0.48
SYDE1-203ENST00000600252 PLPPR3Q6T4P5 718 aa18.03■□□□□ 0.48
SYDE1-203ENST00000600252 PCF11O94913 1555 aaKnown RBP18.03■□□□□ 0.48
SYDE1-203ENST00000600252 EFCAB2Q5VUJ9 269 aa18■□□□□ 0.47
SYDE1-203ENST00000600252 SLC4A1APQ9BWU0 796 aaKnown RBP17.98■□□□□ 0.47
SYDE1-203ENST00000600252 CTTNBP2Q8WZ74 1663 aa17.98■□□□□ 0.47
SYDE1-203ENST00000600252 POLR3GLQ9BT43 218 aa17.98■□□□□ 0.47
SYDE1-203ENST00000600252 WDR97A6NE52 1622 aa17.98■□□□□ 0.47
SYDE1-203ENST00000600252 NUP160Q12769 1436 aa17.98■□□□□ 0.47
SYDE1-203ENST00000600252 EPRSP07814 1512 aaKnown RBP17.96■□□□□ 0.47
SYDE1-203ENST00000600252 BCANQ96GW7 911 aa17.96■□□□□ 0.47
SYDE1-203ENST00000600252 UACAQ9BZF9 1416 aa17.96■□□□□ 0.47
SYDE1-203ENST00000600252 NCOA2Q15596 1464 aa17.96■□□□□ 0.47
SYDE1-203ENST00000600252 CEP170Q5SW79 1584 aa17.95■□□□□ 0.46
SYDE1-203ENST00000600252 TIAM1Q13009 1591 aa17.95■□□□□ 0.46
SYDE1-203ENST00000600252 SIN3AQ96ST3 1273 aa17.91■□□□□ 0.46
SYDE1-203ENST00000600252 FAM69CQ0P6D2 419 aa17.91■□□□□ 0.46
SYDE1-203ENST00000600252 FGD6Q6ZV73 1430 aa17.9■□□□□ 0.46
SYDE1-203ENST00000600252 DISP1Q96F81 1524 aa17.9■□□□□ 0.46
SYDE1-203ENST00000600252 RAB3GAP2Q9H2M9 1393 aa17.9■□□□□ 0.46
SYDE1-203ENST00000600252 HECW1Q76N89 1606 aa17.9■□□□□ 0.46
SYDE1-203ENST00000600252 EIF5BO60841 1220 aaKnown RBP17.9■□□□□ 0.46
SYDE1-203ENST00000600252 FOXD1Q16676 465 aa17.9■□□□□ 0.46
SYDE1-203ENST00000600252 MYOM3Q5VTT5 1437 aa17.89■□□□□ 0.46
SYDE1-203ENST00000600252 UGGT2Q9NYU1 1516 aa17.89■□□□□ 0.46
SYDE1-203ENST00000600252 CHGAP10645 457 aaKnown RBP17.89■□□□□ 0.45
SYDE1-203ENST00000600252 CNGB1Q14028 1251 aaPredicted RBP17.89■□□□□ 0.45
SYDE1-203ENST00000600252 SETD5Q9C0A6 1442 aa17.88■□□□□ 0.45
SYDE1-203ENST00000600252 ESF1Q9H501 851 aaKnown RBP17.87■□□□□ 0.45
SYDE1-203ENST00000600252 TROQ12816 1431 aaPredicted RBP17.87■□□□□ 0.45
SYDE1-203ENST00000600252 KIAA0556O60303 1618 aa17.87■□□□□ 0.45
SYDE1-203ENST00000600252 SENP3Q9H4L4 574 aaPredicted RBP17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms