RNA–Protein interactions for RNA: ENST00000600220.5

ZNF544-217, Transcript of zinc finger protein 544, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene ZNF544, Length 2,837 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544-217ENST00000600220 ZNF316A6NFI3 1004 aaPredicted RBP11.75□□□□□ -0.53
ZNF544-217ENST00000600220 CARMIL1Q5VZK9 1371 aa11.75□□□□□ -0.53
ZNF544-217ENST00000600220 GAPVD1Q14C86 1478 aa11.74□□□□□ -0.53
ZNF544-217ENST00000600220 MIER1Q8N108 512 aa11.74□□□□□ -0.53
ZNF544-217ENST00000600220 CLIP1P30622 1438 aa11.72□□□□□ -0.53
ZNF544-217ENST00000600220 PBRM1Q86U86 1689 aa11.72□□□□□ -0.53
ZNF544-217ENST00000600220 TDRD9Q8NDG6 1382 aaKnown RBP11.68□□□□□ -0.54
ZNF544-217ENST00000600220 CTTNBP2Q8WZ74 1663 aa11.67□□□□□ -0.54
ZNF544-217ENST00000600220 ADAMTS12P58397 1594 aa11.66□□□□□ -0.54
ZNF544-217ENST00000600220 GRIN2BQ13224 1484 aa11.66□□□□□ -0.54
ZNF544-217ENST00000600220 VPS8Q8N3P4 1428 aa11.66□□□□□ -0.54
ZNF544-217ENST00000600220 ARAP1Q96P48 1450 aa11.64□□□□□ -0.55
ZNF544-217ENST00000600220 EIF4G3O43432 1585 aaKnown RBP11.64□□□□□ -0.55
ZNF544-217ENST00000600220 FHAD1B1AJZ9 1412 aa11.63□□□□□ -0.55
ZNF544-217ENST00000600220 ZNF608Q9ULD9 1512 aaPredicted RBP11.62□□□□□ -0.55
ZNF544-217ENST00000600220 ARHGAP35Q9NRY4 1499 aa11.62□□□□□ -0.55
ZNF544-217ENST00000600220 EFCAB5A4FU69 1503 aa11.61□□□□□ -0.55
ZNF544-217ENST00000600220 AQRO60306 1485 aaKnown RBP eCLIP11.61□□□□□ -0.556e-7■■■■■ 28.4
ZNF544-217ENST00000600220 MAGI1Q96QZ7 1491 aaPredicted RBP11.58□□□□□ -0.56
ZNF544-217ENST00000600220 BCL11AQ9H165 835 aa11.56□□□□□ -0.56
ZNF544-217ENST00000600220 SAMD9Q5K651 1589 aa11.56□□□□□ -0.56
ZNF544-217ENST00000600220 SNAPC4Q5SXM2 1469 aa11.55□□□□□ -0.56
ZNF544-217ENST00000600220 HNRNPUL2Q1KMD3 747 aaKnown RBP11.54□□□□□ -0.56
ZNF544-217ENST00000600220 SUPT16HQ9Y5B9 1047 aaKnown RBP11.54□□□□□ -0.56
ZNF544-217ENST00000600220 ANP32EQ9BTT0 268 aa11.53□□□□□ -0.56
ZNF544-217ENST00000600220 MAP3K1Q13233 1512 aa11.52□□□□□ -0.56
ZNF544-217ENST00000600220 IQGAP2Q13576 1575 aa11.52□□□□□ -0.57
ZNF544-217ENST00000600220 SYNJ2O15056 1496 aa11.52□□□□□ -0.57
ZNF544-217ENST00000600220 GRIN2AQ12879 1464 aa11.52□□□□□ -0.57
ZNF544-217ENST00000600220 TSHZ2Q9NRE2 1034 aa11.5□□□□□ -0.57
ZNF544-217ENST00000600220 UGGT2Q9NYU1 1516 aa11.49□□□□□ -0.57
ZNF544-217ENST00000600220 KIAA0586Q9BVV6 1533 aa11.48□□□□□ -0.57
ZNF544-217ENST00000600220 FYCO1Q9BQS8 1478 aa11.47□□□□□ -0.57
ZNF544-217ENST00000600220 CFAP43Q8NDM7 1665 aa11.47□□□□□ -0.57
ZNF544-217ENST00000600220 PCF11O94913 1555 aaKnown RBP11.46□□□□□ -0.57
ZNF544-217ENST00000600220 FMN1Q68DA7 1419 aa11.46□□□□□ -0.57
ZNF544-217ENST00000600220 RANGAP1P46060 587 aaPredicted RBP11.46□□□□□ -0.58
ZNF544-217ENST00000600220 NUP160Q12769 1436 aa11.46□□□□□ -0.58
ZNF544-217ENST00000600220 CASKIN1Q8WXD9 1431 aa11.45□□□□□ -0.58
ZNF544-217ENST00000600220 TIAM1Q13009 1591 aa11.45□□□□□ -0.58
ZNF544-217ENST00000600220 CEP170Q5SW79 1584 aa11.45□□□□□ -0.58
ZNF544-217ENST00000600220 FHOD3Q2V2M9 1422 aa11.44□□□□□ -0.58
ZNF544-217ENST00000600220 APLP2Q06481 763 aa11.44□□□□□ -0.58
ZNF544-217ENST00000600220 BCANQ96GW7 911 aa11.41□□□□□ -0.58
ZNF544-217ENST00000600220 KIAA0556O60303 1618 aa11.41□□□□□ -0.58
ZNF544-217ENST00000600220 DISP1Q96F81 1524 aa11.39□□□□□ -0.59
ZNF544-217ENST00000600220 CHMP7Q8WUX9 453 aaPredicted RBP11.38□□□□□ -0.59
ZNF544-217ENST00000600220 LRRC9Q6ZRR7 1453 aa11.37□□□□□ -0.59
ZNF544-217ENST00000600220 CHD1O14646 1710 aa11.37□□□□□ -0.59
ZNF544-217ENST00000600220 HECW1Q76N89 1606 aa11.37□□□□□ -0.59
ZNF544-217ENST00000600220 CLSPNQ9HAW4 1339 aa11.36□□□□□ -0.59
ZNF544-217ENST00000600220 LRRIQ1Q96JM4 1722 aa11.36□□□□□ -0.59
ZNF544-217ENST00000600220 CCDC18Q5T9S5 1454 aa11.35□□□□□ -0.59
ZNF544-217ENST00000600220 P3H3Q8IVL6 736 aa11.34□□□□□ -0.59
ZNF544-217ENST00000600220 RRBP1Q9P2E9 1410 aaKnown RBP11.34□□□□□ -0.59
ZNF544-217ENST00000600220 KANK4Q5T7N3 995 aaPredicted RBP11.34□□□□□ -0.59
ZNF544-217ENST00000600220 SHROOM2Q13796 1616 aa11.33□□□□□ -0.6
ZNF544-217ENST00000600220 CARMIL2Q6F5E8 1435 aa11.31□□□□□ -0.6
ZNF544-217ENST00000600220 KCNH8Q96L42 1107 aa11.31□□□□□ -0.6
ZNF544-217ENST00000600220 EHBP1L1Q8N3D4 1523 aa11.31□□□□□ -0.6
ZNF544-217ENST00000600220 RAPGEF6Q8TEU7 1601 aa11.3□□□□□ -0.6
ZNF544-217ENST00000600220 FKBP8Q14318 412 aa11.29□□□□□ -0.6
ZNF544-217ENST00000600220 CLASP1Q7Z460 1538 aa11.28□□□□□ -0.6
ZNF544-217ENST00000600220 EPRSP07814 1512 aaKnown RBP11.28□□□□□ -0.6
ZNF544-217ENST00000600220 FBLN2P98095 1184 aa11.27□□□□□ -0.6
ZNF544-217ENST00000600220 JPH4Q96JJ6 628 aa11.27□□□□□ -0.61
ZNF544-217ENST00000600220 ARHGEF11O15085 1522 aa11.26□□□□□ -0.61
ZNF544-217ENST00000600220 SUPT6HQ7KZ85 1726 aaKnown RBP11.26□□□□□ -0.61
ZNF544-217ENST00000600220 ABCA8O94911 1581 aa11.25□□□□□ -0.61
ZNF544-217ENST00000600220 NUP153P49790 1475 aaKnown RBP11.25□□□□□ -0.61
ZNF544-217ENST00000600220 RBM19Q9Y4C8 960 aaKnown RBP11.25□□□□□ -0.61
ZNF544-217ENST00000600220 CCNB3Q8WWL7 1395 aa11.25□□□□□ -0.61
ZNF544-217ENST00000600220 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.25□□□□□ -0.61
ZNF544-217ENST00000600220 MAGI3Q5TCQ9 1506 aa11.24□□□□□ -0.61
ZNF544-217ENST00000600220 PHLDB1Q86UU1 1377 aa11.23□□□□□ -0.61
ZNF544-217ENST00000600220 ITGAEP38570 1179 aa11.23□□□□□ -0.61
ZNF544-217ENST00000600220 MTUS2Q5JR59 1369 aa11.22□□□□□ -0.61
ZNF544-217ENST00000600220 PRG4Q92954 1404 aaPredicted RBP11.22□□□□□ -0.61
ZNF544-217ENST00000600220 CDK13Q14004 1512 aaKnown RBP11.21□□□□□ -0.61
ZNF544-217ENST00000600220 NCOA2Q15596 1464 aa11.21□□□□□ -0.62
ZNF544-217ENST00000600220 ATP1B4Q9UN42 357 aaPredicted RBP11.2□□□□□ -0.62
ZNF544-217ENST00000600220 ADCY10Q96PN6 1610 aa11.2□□□□□ -0.62
ZNF544-217ENST00000600220 PLB1Q6P1J6 1458 aa11.19□□□□□ -0.62
ZNF544-217ENST00000600220 MYOM3Q5VTT5 1437 aa11.18□□□□□ -0.62
ZNF544-217ENST00000600220 FGD6Q6ZV73 1430 aa11.18□□□□□ -0.62
ZNF544-217ENST00000600220 TCOF1Q13428 1488 aaKnown RBP11.16□□□□□ -0.62
ZNF544-217ENST00000600220 DHX57Q6P158 1386 aaKnown RBP11.16□□□□□ -0.62
ZNF544-217ENST00000600220 PTPRGP23470 1445 aa11.16□□□□□ -0.62
ZNF544-217ENST00000600220 NEFLP07196 543 aa11.16□□□□□ -0.62
ZNF544-217ENST00000600220 TROQ12816 1431 aaPredicted RBP11.15□□□□□ -0.62
ZNF544-217ENST00000600220 MSH5O43196 834 aa11.15□□□□□ -0.62
ZNF544-217ENST00000600220 MIA2Q96PC5 1412 aa11.15□□□□□ -0.63
ZNF544-217ENST00000600220 PTPN23Q9H3S7 1636 aa11.14□□□□□ -0.63
ZNF544-217ENST00000600220 ERCC6L2Q5T890 1561 aa11.14□□□□□ -0.63
ZNF544-217ENST00000600220 CDK11AQ9UQ88 783 aaPredicted RBP11.13□□□□□ -0.63
ZNF544-217ENST00000600220 UHRF1BP1LA0JNW5 1464 aa11.13□□□□□ -0.63
ZNF544-217ENST00000600220 UACAQ9BZF9 1416 aa11.13□□□□□ -0.63
ZNF544-217ENST00000600220 ABCC2Q92887 1545 aa11.13□□□□□ -0.63
ZNF544-217ENST00000600220 ATP10BO94823 1461 aa11.13□□□□□ -0.63
ZNF544-217ENST00000600220 DDX10Q13206 875 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms