RNA–Protein interactions for RNA: ENST00000600094.5

ZNF546-207, Transcript of zinc finger protein 546, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZNF546, Length 3,426 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546-207ENST00000600094 WDR97A6NE52 1622 aa12.45□□□□□ -0.42
ZNF546-207ENST00000600094 BIVM-ERCC5R4GMW8 1640 aa12.45□□□□□ -0.42
ZNF546-207ENST00000600094 FANCIQ9NVI1 1328 aa12.44□□□□□ -0.42
ZNF546-207ENST00000600094 KIF27Q86VH2 1401 aa12.43□□□□□ -0.42
ZNF546-207ENST00000600094 ARHGAP35Q9NRY4 1499 aa12.43□□□□□ -0.42
ZNF546-207ENST00000600094 CDK11AQ9UQ88 783 aaPredicted RBP12.43□□□□□ -0.42
ZNF546-207ENST00000600094 SIN3AQ96ST3 1273 aa12.42□□□□□ -0.42
ZNF546-207ENST00000600094 MSH5O43196 834 aa12.42□□□□□ -0.42
ZNF546-207ENST00000600094 BICRAQ9NZM4 1560 aa12.4□□□□□ -0.42
ZNF546-207ENST00000600094 MYT1LQ9UL68 1186 aa12.4□□□□□ -0.42
ZNF546-207ENST00000600094 MAP3K1Q13233 1512 aa12.39□□□□□ -0.43
ZNF546-207ENST00000600094 FAM50AQ14320 339 aaKnown RBP12.37□□□□□ -0.43
ZNF546-207ENST00000600094 HIRIP3Q9BW71 556 aaPredicted RBP12.37□□□□□ -0.43
ZNF546-207ENST00000600094 TIAM1Q13009 1591 aa12.37□□□□□ -0.43
ZNF546-207ENST00000600094 LRRC9Q6ZRR7 1453 aa12.34□□□□□ -0.43
ZNF546-207ENST00000600094 HNRNPUQ00839 825 aaKnown RBP eCLIP12.33□□□□□ -0.44
ZNF546-207ENST00000600094 PHLDB1Q86UU1 1377 aa12.33□□□□□ -0.44
ZNF546-207ENST00000600094 ERICH6BQ5W0A0 696 aa12.33□□□□□ -0.44
ZNF546-207ENST00000600094 TONSLQ96HA7 1378 aa12.33□□□□□ -0.44
ZNF546-207ENST00000600094 CUX1P39880 1505 aa12.32□□□□□ -0.44
ZNF546-207ENST00000600094 IRX6P78412 446 aaPredicted RBP12.29□□□□□ -0.44
ZNF546-207ENST00000600094 FHAD1B1AJZ9 1412 aa12.29□□□□□ -0.44
ZNF546-207ENST00000600094 PPP4R2Q9NY27 417 aa12.28□□□□□ -0.44
ZNF546-207ENST00000600094 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.25□□□□□ -0.45
ZNF546-207ENST00000600094 DEKP35659 375 aaKnown RBP12.23□□□□□ -0.45
ZNF546-207ENST00000600094 ATP1B4Q9UN42 357 aaPredicted RBP12.23□□□□□ -0.45
ZNF546-207ENST00000600094 IGF1RP08069 1367 aa12.22□□□□□ -0.45
ZNF546-207ENST00000600094 CFAP43Q8NDM7 1665 aa12.22□□□□□ -0.45
ZNF546-207ENST00000600094 CARMIL1Q5VZK9 1371 aa12.21□□□□□ -0.46
ZNF546-207ENST00000600094 UACAQ9BZF9 1416 aa12.19□□□□□ -0.46
ZNF546-207ENST00000600094 CCDC18Q5T9S5 1454 aa12.19□□□□□ -0.46
ZNF546-207ENST00000600094 PCF11O94913 1555 aaKnown RBP12.19□□□□□ -0.46
ZNF546-207ENST00000600094 NOP58Q9Y2X3 529 aaKnown RBP12.18□□□□□ -0.46
ZNF546-207ENST00000600094 CFTRP13569 1480 aa12.17□□□□□ -0.46
ZNF546-207ENST00000600094 HMGXB3Q12766 1538 aa12.16□□□□□ -0.46
ZNF546-207ENST00000600094 B4GALNT3Q6L9W6 998 aa12.16□□□□□ -0.46
ZNF546-207ENST00000600094 HFM1A2PYH4 1435 aa12.16□□□□□ -0.46
ZNF546-207ENST00000600094 FYCO1Q9BQS8 1478 aa12.16□□□□□ -0.46
ZNF546-207ENST00000600094 P3H3Q8IVL6 736 aa12.15□□□□□ -0.46
ZNF546-207ENST00000600094 FGD6Q6ZV73 1430 aa12.15□□□□□ -0.46
ZNF546-207ENST00000600094 WASHC2AQ641Q2 1341 aa12.15□□□□□ -0.46
ZNF546-207ENST00000600094 NCAPD3P42695 1498 aa12.14□□□□□ -0.47
ZNF546-207ENST00000600094 ZBED9Q6R2W3 1325 aa12.13□□□□□ -0.47
ZNF546-207ENST00000600094 HSPA5P11021 654 aaKnown RBP12.13□□□□□ -0.47
ZNF546-207ENST00000600094 EIF4G2P78344 907 aaKnown RBP eCLIP12.13□□□□□ -0.47
ZNF546-207ENST00000600094 NBR1Q14596 966 aa12.13□□□□□ -0.47
ZNF546-207ENST00000600094 CASKIN1Q8WXD9 1431 aa12.12□□□□□ -0.47
ZNF546-207ENST00000600094 CNTLNQ9NXG0 1405 aa12.12□□□□□ -0.47
ZNF546-207ENST00000600094 FAM9BQ8IZU0 186 aa12.12□□□□□ -0.47
ZNF546-207ENST00000600094 FHOD3Q2V2M9 1422 aa12.11□□□□□ -0.47
ZNF546-207ENST00000600094 FGD5Q6ZNL6 1462 aa12.11□□□□□ -0.47
ZNF546-207ENST00000600094 MRS2Q9HD23 443 aa12.11□□□□□ -0.47
ZNF546-207ENST00000600094 AQRO60306 1485 aaKnown RBP eCLIP12.11□□□□□ -0.47
ZNF546-207ENST00000600094 PTPN23Q9H3S7 1636 aa12.11□□□□□ -0.47
ZNF546-207ENST00000600094 ANP32AP39687 249 aaKnown RBP12.1□□□□□ -0.47
ZNF546-207ENST00000600094 RTL5Q5HYW3 569 aaPredicted RBP12.1□□□□□ -0.47
ZNF546-207ENST00000600094 NCOA2Q15596 1464 aa12.1□□□□□ -0.47
ZNF546-207ENST00000600094 EFCAB5A4FU69 1503 aa12.09□□□□□ -0.47
ZNF546-207ENST00000600094 FMN1Q68DA7 1419 aa12.09□□□□□ -0.47
ZNF546-207ENST00000600094 MTUS2Q5JR59 1369 aa12.09□□□□□ -0.47
ZNF546-207ENST00000600094 PRKRIP1Q9H875 184 aaPredicted RBP12.09□□□□□ -0.47
ZNF546-207ENST00000600094 NAIPQ13075 1403 aa12.08□□□□□ -0.47
ZNF546-207ENST00000600094 KDM5BQ9UGL1 1544 aa12.08□□□□□ -0.48
ZNF546-207ENST00000600094 CCDC184Q52MB2 194 aa12.08□□□□□ -0.48
ZNF546-207ENST00000600094 PRKCSHP14314 528 aaPredicted RBP12.07□□□□□ -0.48
ZNF546-207ENST00000600094 PTPRKQ15262 1439 aa12.07□□□□□ -0.48
ZNF546-207ENST00000600094 PAK3O75914 559 aaPredicted RBP12.07□□□□□ -0.48
ZNF546-207ENST00000600094 IPO9Q96P70 1041 aaKnown RBP12.05□□□□□ -0.48
ZNF546-207ENST00000600094 ZBTB47Q9UFB7 747 aaPredicted RBP12.04□□□□□ -0.48
ZNF546-207ENST00000600094 CCDC7Q96M83 1385 aa12.04□□□□□ -0.48
ZNF546-207ENST00000600094 CCDC136Q96JN2 1154 aa12.04□□□□□ -0.48
ZNF546-207ENST00000600094 NCOA1Q15788 1441 aa12.03□□□□□ -0.48
ZNF546-207ENST00000600094 MYOM3Q5VTT5 1437 aa12.03□□□□□ -0.48
ZNF546-207ENST00000600094 PRDM2Q13029 1718 aa12.01□□□□□ -0.49
ZNF546-207ENST00000600094 SMG6Q86US8 1419 aaKnown RBP12.01□□□□□ -0.49
ZNF546-207ENST00000600094 NUDCQ9Y266 331 aa11.99□□□□□ -0.49
ZNF546-207ENST00000600094 SNAPC4Q5SXM2 1469 aa11.99□□□□□ -0.49
ZNF546-207ENST00000600094 RRP7BPQ9NSQ0 103 aa11.98□□□□□ -0.49
ZNF546-207ENST00000600094 C11orf95C9JLR9 678 aaPredicted RBP11.98□□□□□ -0.49
ZNF546-207ENST00000600094 L3MBTL2Q969R5 705 aa11.98□□□□□ -0.49
ZNF546-207ENST00000600094 CADPSQ9ULU8 1353 aa11.97□□□□□ -0.49
ZNF546-207ENST00000600094 AKNAQ7Z591 1439 aa11.97□□□□□ -0.49
ZNF546-207ENST00000600094 HECW1Q76N89 1606 aa11.97□□□□□ -0.49
ZNF546-207ENST00000600094 RNF123Q5XPI4 1314 aa11.96□□□□□ -0.5
ZNF546-207ENST00000600094 SUPT6HQ7KZ85 1726 aaKnown RBP11.96□□□□□ -0.5
ZNF546-207ENST00000600094 EHBP1L1Q8N3D4 1523 aa11.95□□□□□ -0.5
ZNF546-207ENST00000600094 KIF7Q2M1P5 1343 aa11.95□□□□□ -0.5
ZNF546-207ENST00000600094 MPHOSPH9Q99550 1183 aa11.95□□□□□ -0.5
ZNF546-207ENST00000600094 CHIC2Q9UKJ5 165 aa11.95□□□□□ -0.5
ZNF546-207ENST00000600094 ANO8Q9HCE9 1232 aaPredicted RBP11.93□□□□□ -0.5
ZNF546-207ENST00000600094 CTTNBP2Q8WZ74 1663 aa11.93□□□□□ -0.5
ZNF546-207ENST00000600094 DENND4BO75064 1496 aaPredicted RBP11.93□□□□□ -0.5
ZNF546-207ENST00000600094 CC2D2AQ9P2K1 1620 aa11.93□□□□□ -0.5
ZNF546-207ENST00000600094 THOC2Q8NI27 1593 aaKnown RBP11.92□□□□□ -0.5
ZNF546-207ENST00000600094 CUL7Q14999 1698 aa11.92□□□□□ -0.5
ZNF546-207ENST00000600094 GCC2Q8IWJ2 1684 aa11.92□□□□□ -0.5
ZNF546-207ENST00000600094 USP35Q9P2H5 1018 aa11.92□□□□□ -0.5
ZNF546-207ENST00000600094 ABCA10Q8WWZ4 1543 aa11.91□□□□□ -0.5
ZNF546-207ENST00000600094 UGGT2Q9NYU1 1516 aa11.91□□□□□ -0.5
ZNF546-207ENST00000600094 ABCA5Q8WWZ7 1642 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms