RNA–Protein interactions for RNA: ENST00000598343.5

SARS2-208, Transcript of seryl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene SARS2, Length 541 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SARS2-208ENST00000598343 ARHGEF11O15085 1522 aa29.51■■■□□ 2.32
SARS2-208ENST00000598343 SHROOM2Q13796 1616 aa29.5■■■□□ 2.31
SARS2-208ENST00000598343 JPH4Q96JJ6 628 aa29.48■■■□□ 2.31
SARS2-208ENST00000598343 RIMBP3CA6NJZ7 1639 aa29.48■■■□□ 2.31
SARS2-208ENST00000598343 RIMBP3BA6NNM3 1639 aa29.48■■■□□ 2.31
SARS2-208ENST00000598343 RIMBP3Q9UFD9 1639 aa29.48■■■□□ 2.31
SARS2-208ENST00000598343 IQGAP2Q13576 1575 aa29.47■■■□□ 2.31
SARS2-208ENST00000598343 CTTNBP2Q8WZ74 1663 aa29.47■■■□□ 2.31
SARS2-208ENST00000598343 GOLGA3Q08378 1498 aa29.41■■■□□ 2.3
SARS2-208ENST00000598343 PRG4Q92954 1404 aaPredicted RBP29.4■■■□□ 2.3
SARS2-208ENST00000598343 EHMT2Q96KQ7 1210 aa29.39■■■□□ 2.3
SARS2-208ENST00000598343 ERCC6L2Q5T890 1561 aa29.35■■■□□ 2.29
SARS2-208ENST00000598343 UBTFP17480 764 aaKnown RBP29.32■■■□□ 2.28
SARS2-208ENST00000598343 UGGT2Q9NYU1 1516 aa29.31■■■□□ 2.28
SARS2-208ENST00000598343 ARAP1Q96P48 1450 aa29.29■■■□□ 2.28
SARS2-208ENST00000598343 CARMIL2Q6F5E8 1435 aa29.28■■■□□ 2.28
SARS2-208ENST00000598343 CYB5RLQ6IPT4 315 aa29.23■■■□□ 2.27
SARS2-208ENST00000598343 DISP1Q96F81 1524 aa29.22■■■□□ 2.27
SARS2-208ENST00000598343 KIAA0556O60303 1618 aa29.18■■■□□ 2.26
SARS2-208ENST00000598343 RANGAP1P46060 587 aaPredicted RBP29.15■■■□□ 2.26
SARS2-208ENST00000598343 TNIKQ9UKE5 1360 aa29.13■■■□□ 2.25
SARS2-208ENST00000598343 PTPRGP23470 1445 aa29.1■■■□□ 2.25
SARS2-208ENST00000598343 SAMD9Q5K651 1589 aa29.09■■■□□ 2.25
SARS2-208ENST00000598343 TTBK1Q5TCY1 1321 aaPredicted RBP29.08■■■□□ 2.25
SARS2-208ENST00000598343 EFCAB5A4FU69 1503 aa29.04■■■□□ 2.24
SARS2-208ENST00000598343 P3H3Q8IVL6 736 aa29.04■■■□□ 2.24
SARS2-208ENST00000598343 LOC105371045A0A1W2PR82 267 aa29.03■■■□□ 2.24
SARS2-208ENST00000598343 FHOD3Q2V2M9 1422 aa28.94■■■□□ 2.22
SARS2-208ENST00000598343 ARHGAP35Q9NRY4 1499 aa28.93■■■□□ 2.22
SARS2-208ENST00000598343 UACAQ9BZF9 1416 aa28.91■■■□□ 2.22
SARS2-208ENST00000598343 ADCY10Q96PN6 1610 aa28.9■■■□□ 2.22
SARS2-208ENST00000598343 CLIP1P30622 1438 aa28.89■■■□□ 2.22
SARS2-208ENST00000598343 UHRF1BP1LA0JNW5 1464 aa28.85■■■□□ 2.21
SARS2-208ENST00000598343 PLB1Q6P1J6 1458 aa28.85■■■□□ 2.21
SARS2-208ENST00000598343 ABCC2Q92887 1545 aa28.85■■■□□ 2.21
SARS2-208ENST00000598343 CEP162Q5TB80 1403 aa28.84■■■□□ 2.21
SARS2-208ENST00000598343 ABCA8O94911 1581 aa28.84■■■□□ 2.21
SARS2-208ENST00000598343 NPM1P06748 294 aaKnown RBP eCLIP28.82■■■□□ 2.2
SARS2-208ENST00000598343 FMN1Q68DA7 1419 aa28.78■■■□□ 2.2
SARS2-208ENST00000598343 RAPGEF6Q8TEU7 1601 aa28.76■■■□□ 2.2
SARS2-208ENST00000598343 KDM5BQ9UGL1 1544 aa28.72■■■□□ 2.19
SARS2-208ENST00000598343 ZCCHC11Q5TAX3 1644 aaKnown RBP28.68■■■□□ 2.18
SARS2-208ENST00000598343 MAPKBP1O60336 1514 aa28.65■■■□□ 2.18
SARS2-208ENST00000598343 NUP153P49790 1475 aaKnown RBP28.65■■■□□ 2.18
SARS2-208ENST00000598343 ARID3CA6NKF2 412 aa28.62■■■□□ 2.17
SARS2-208ENST00000598343 ATP1B4Q9UN42 357 aaPredicted RBP28.61■■■□□ 2.17
SARS2-208ENST00000598343 HECW1Q76N89 1606 aa28.61■■■□□ 2.17
SARS2-208ENST00000598343 ATP10BO94823 1461 aa28.6■■■□□ 2.17
SARS2-208ENST00000598343 ASXL2Q76L83 1435 aa28.58■■■□□ 2.17
SARS2-208ENST00000598343 CASKIN1Q8WXD9 1431 aa28.58■■■□□ 2.17
SARS2-208ENST00000598343 PCF11O94913 1555 aaKnown RBP28.58■■■□□ 2.17
SARS2-208ENST00000598343 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.56■■■□□ 2.16
SARS2-208ENST00000598343 HNRNPUL2Q1KMD3 747 aaKnown RBP28.56■■■□□ 2.16
SARS2-208ENST00000598343 TRHP20396 242 aaPredicted RBP28.55■■■□□ 2.16
SARS2-208ENST00000598343 FYCO1Q9BQS8 1478 aa28.54■■■□□ 2.16
SARS2-208ENST00000598343 EPRSP07814 1512 aaKnown RBP28.5■■■□□ 2.15
SARS2-208ENST00000598343 CDK13Q14004 1512 aaKnown RBP28.49■■■□□ 2.15
SARS2-208ENST00000598343 ABCC10Q5T3U5 1492 aa28.48■■■□□ 2.15
SARS2-208ENST00000598343 WDR7Q9Y4E6 1490 aa28.48■■■□□ 2.15
SARS2-208ENST00000598343 VPS8Q8N3P4 1428 aa28.47■■■□□ 2.15
SARS2-208ENST00000598343 CCDC18Q5T9S5 1454 aa28.45■■■□□ 2.14
SARS2-208ENST00000598343 DIP2BQ9P265 1576 aa28.45■■■□□ 2.14
SARS2-208ENST00000598343 LRRIQ1Q96JM4 1722 aa28.43■■■□□ 2.14
SARS2-208ENST00000598343 FAM69CQ0P6D2 419 aa28.42■■■□□ 2.14
SARS2-208ENST00000598343 PLEKHD1A6NEE1 506 aa28.41■■■□□ 2.14
SARS2-208ENST00000598343 KIF13AQ9H1H9 1805 aa28.39■■■□□ 2.14
SARS2-208ENST00000598343 CDK11AQ9UQ88 783 aaPredicted RBP28.39■■■□□ 2.14
SARS2-208ENST00000598343 KCNH8Q96L42 1107 aa28.38■■■□□ 2.13
SARS2-208ENST00000598343 GLI2P10070 1586 aa28.35■■■□□ 2.13
SARS2-208ENST00000598343 TROQ12816 1431 aaPredicted RBP28.26■■■□□ 2.12
SARS2-208ENST00000598343 MAP3K4Q9Y6R4 1608 aa28.24■■■□□ 2.11
SARS2-208ENST00000598343 MAGI3Q5TCQ9 1506 aa28.23■■■□□ 2.11
SARS2-208ENST00000598343 CFAP43Q8NDM7 1665 aa28.23■■■□□ 2.11
SARS2-208ENST00000598343 ABCA9Q8IUA7 1624 aa28.21■■■□□ 2.11
SARS2-208ENST00000598343 TIAM1Q13009 1591 aa28.21■■■□□ 2.11
SARS2-208ENST00000598343 KIF14Q15058 1648 aa28.2■■■□□ 2.1
SARS2-208ENST00000598343 CD109Q6YHK3 1445 aa28.19■■■□□ 2.1
SARS2-208ENST00000598343 MTUS2Q5JR59 1369 aa28.19■■■□□ 2.1
SARS2-208ENST00000598343 APLP2Q06481 763 aa28.18■■■□□ 2.1
SARS2-208ENST00000598343 MAP3K1Q13233 1512 aa28.18■■■□□ 2.1
SARS2-208ENST00000598343 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.18■■■□□ 2.14e-8■■■■■ 52.5
SARS2-208ENST00000598343 TSPOAP1O95153 1857 aa28.17■■■□□ 2.1
SARS2-208ENST00000598343 EHBP1L1Q8N3D4 1523 aa28.14■■■□□ 2.1
SARS2-208ENST00000598343 TTC37Q6PGP7 1564 aa28.13■■■□□ 2.09
SARS2-208ENST00000598343 PPRC1Q5VV67 1664 aaKnown RBP28.11■■■□□ 2.09
SARS2-208ENST00000598343 TEX14Q8IWB6 1497 aa28.11■■■□□ 2.09
SARS2-208ENST00000598343 LRRC9Q6ZRR7 1453 aa28.08■■■□□ 2.09
SARS2-208ENST00000598343 KANK4Q5T7N3 995 aaPredicted RBP28.03■■■□□ 2.08
SARS2-208ENST00000598343 MYO5CQ9NQX4 1742 aa28.03■■■□□ 2.08
SARS2-208ENST00000598343 PLCH2O75038 1416 aa28.01■■■□□ 2.08
SARS2-208ENST00000598343 SUPT6HQ7KZ85 1726 aaKnown RBP28.01■■■□□ 2.07
SARS2-208ENST00000598343 ARAP3Q8WWN8 1544 aa27.97■■■□□ 2.07
SARS2-208ENST00000598343 FANCAO15360 1455 aa27.96■■■□□ 2.07
SARS2-208ENST00000598343 CFAP74Q9C0B2 1584 aa27.96■■■□□ 2.07
SARS2-208ENST00000598343 CCNB3Q8WWL7 1395 aa27.96■■■□□ 2.07
SARS2-208ENST00000598343 NCOA2Q15596 1464 aa27.95■■■□□ 2.07
SARS2-208ENST00000598343 NEO1Q92859 1461 aa27.95■■■□□ 2.07
SARS2-208ENST00000598343 PREX2Q70Z35 1606 aa27.95■■■□□ 2.06
SARS2-208ENST00000598343 ARHGAP5Q13017 1502 aa27.94■■■□□ 2.06
SARS2-208ENST00000598343 CDC42BPAQ5VT25 1732 aa27.93■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms