RNA–Protein interactions for RNA: ENST00000598256.1

LTBP4-222, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-222ENST00000598256 GRIN2AQ12879 1464 aa26.12■■□□□ 1.77
LTBP4-222ENST00000598256 FBLN2P98095 1184 aa26.09■■□□□ 1.77
LTBP4-222ENST00000598256 CHMP7Q8WUX9 453 aaPredicted RBP26.09■■□□□ 1.77
LTBP4-222ENST00000598256 CTTNBP2Q8WZ74 1663 aa26.09■■□□□ 1.77
LTBP4-222ENST00000598256 GOLGA3Q08378 1498 aa26.08■■□□□ 1.77
LTBP4-222ENST00000598256 EHMT2Q96KQ7 1210 aa26.02■■□□□ 1.76
LTBP4-222ENST00000598256 CEP170Q5SW79 1584 aa26.01■■□□□ 1.75
LTBP4-222ENST00000598256 NUP160Q12769 1436 aa25.95■■□□□ 1.74
LTBP4-222ENST00000598256 UBTFP17480 764 aaKnown RBP25.89■■□□□ 1.74
LTBP4-222ENST00000598256 IQGAP2Q13576 1575 aa25.89■■□□□ 1.73
LTBP4-222ENST00000598256 CLASP1Q7Z460 1538 aa25.87■■□□□ 1.73
LTBP4-222ENST00000598256 KIAA0586Q9BVV6 1533 aa25.84■■□□□ 1.73
LTBP4-222ENST00000598256 LOC105371045A0A1W2PR82 267 aa25.83■■□□□ 1.73
LTBP4-222ENST00000598256 TNIKQ9UKE5 1360 aa25.78■■□□□ 1.72
LTBP4-222ENST00000598256 SHROOM2Q13796 1616 aa25.77■■□□□ 1.72
LTBP4-222ENST00000598256 AEBP2Q6ZN18 517 aaPredicted RBP25.76■■□□□ 1.71
LTBP4-222ENST00000598256 UGGT2Q9NYU1 1516 aa25.7■■□□□ 1.7
LTBP4-222ENST00000598256 SAMD9Q5K651 1589 aa25.65■■□□□ 1.7
LTBP4-222ENST00000598256 RANGAP1P46060 587 aaPredicted RBP25.65■■□□□ 1.7
LTBP4-222ENST00000598256 EFCAB5A4FU69 1503 aa25.64■■□□□ 1.7
LTBP4-222ENST00000598256 KIAA0556O60303 1618 aa25.64■■□□□ 1.7
LTBP4-222ENST00000598256 CEP162Q5TB80 1403 aa25.63■■□□□ 1.69
LTBP4-222ENST00000598256 JPH4Q96JJ6 628 aa25.62■■□□□ 1.69
LTBP4-222ENST00000598256 CLIP1P30622 1438 aa25.59■■□□□ 1.69
LTBP4-222ENST00000598256 PRG4Q92954 1404 aaPredicted RBP25.59■■□□□ 1.69
LTBP4-222ENST00000598256 DISP1Q96F81 1524 aa25.58■■□□□ 1.68
LTBP4-222ENST00000598256 CARMIL2Q6F5E8 1435 aa25.57■■□□□ 1.68
LTBP4-222ENST00000598256 ERCC6L2Q5T890 1561 aa25.56■■□□□ 1.68
LTBP4-222ENST00000598256 ARHGAP35Q9NRY4 1499 aa25.55■■□□□ 1.68
LTBP4-222ENST00000598256 FHOD3Q2V2M9 1422 aa25.47■■□□□ 1.67
LTBP4-222ENST00000598256 P3H3Q8IVL6 736 aa25.46■■□□□ 1.67
LTBP4-222ENST00000598256 TTBK1Q5TCY1 1321 aaPredicted RBP25.37■■□□□ 1.65
LTBP4-222ENST00000598256 FMN1Q68DA7 1419 aa25.35■■□□□ 1.65
LTBP4-222ENST00000598256 PTPRGP23470 1445 aa25.34■■□□□ 1.65
LTBP4-222ENST00000598256 RAPGEF6Q8TEU7 1601 aa25.32■■□□□ 1.64
LTBP4-222ENST00000598256 PCF11O94913 1555 aaKnown RBP25.31■■□□□ 1.64
LTBP4-222ENST00000598256 VPS8Q8N3P4 1428 aa25.28■■□□□ 1.64
LTBP4-222ENST00000598256 ABCA8O94911 1581 aa25.27■■□□□ 1.64
LTBP4-222ENST00000598256 HECW1Q76N89 1606 aa25.27■■□□□ 1.64
LTBP4-222ENST00000598256 PLB1Q6P1J6 1458 aa25.25■■□□□ 1.63
LTBP4-222ENST00000598256 ABCC2Q92887 1545 aa25.22■■□□□ 1.63
LTBP4-222ENST00000598256 FYCO1Q9BQS8 1478 aa25.21■■□□□ 1.63
LTBP4-222ENST00000598256 LRRIQ1Q96JM4 1722 aa25.21■■□□□ 1.63
LTBP4-222ENST00000598256 ADCY10Q96PN6 1610 aa25.21■■□□□ 1.63
LTBP4-222ENST00000598256 UACAQ9BZF9 1416 aa25.2■■□□□ 1.63
LTBP4-222ENST00000598256 CASKIN1Q8WXD9 1431 aa25.19■■□□□ 1.62
LTBP4-222ENST00000598256 KIF13AQ9H1H9 1805 aa25.18■■□□□ 1.62
LTBP4-222ENST00000598256 UHRF1BP1LA0JNW5 1464 aa25.15■■□□□ 1.62
LTBP4-222ENST00000598256 NUP153P49790 1475 aaKnown RBP25.14■■□□□ 1.61
LTBP4-222ENST00000598256 ATP1B4Q9UN42 357 aaPredicted RBP25.13■■□□□ 1.61
LTBP4-222ENST00000598256 CFAP43Q8NDM7 1665 aa25.13■■□□□ 1.61
LTBP4-222ENST00000598256 ZCCHC11Q5TAX3 1644 aaKnown RBP25.11■■□□□ 1.61
LTBP4-222ENST00000598256 CCDC18Q5T9S5 1454 aa25.09■■□□□ 1.61
LTBP4-222ENST00000598256 EPRSP07814 1512 aaKnown RBP25.07■■□□□ 1.6
LTBP4-222ENST00000598256 CDK13Q14004 1512 aaKnown RBP25.07■■□□□ 1.6
LTBP4-222ENST00000598256 KDM5BQ9UGL1 1544 aa25.04■■□□□ 1.6
LTBP4-222ENST00000598256 FAM69CQ0P6D2 419 aa25.04■■□□□ 1.6
LTBP4-222ENST00000598256 TIAM1Q13009 1591 aa25.04■■□□□ 1.6
LTBP4-222ENST00000598256 ARID3CA6NKF2 412 aa25.03■■□□□ 1.6
LTBP4-222ENST00000598256 ABCC10Q5T3U5 1492 aa25.02■■□□□ 1.6
LTBP4-222ENST00000598256 ATP10BO94823 1461 aa25■■□□□ 1.59
LTBP4-222ENST00000598256 KDM4FA0A1W2PPD8 638 aa24.98■■□□□ 1.59
LTBP4-222ENST00000598256 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.98■■□□□ 1.59
LTBP4-222ENST00000598256 APLP2Q06481 763 aa24.98■■□□□ 1.59
LTBP4-222ENST00000598256 HNRNPUL2Q1KMD3 747 aaKnown RBP24.98■■□□□ 1.59
LTBP4-222ENST00000598256 MAP3K1Q13233 1512 aa24.97■■□□□ 1.59
LTBP4-222ENST00000598256 NPM1P06748 294 aaKnown RBP eCLIP24.95■■□□□ 1.58
LTBP4-222ENST00000598256 MAPKBP1O60336 1514 aa24.92■■□□□ 1.58
LTBP4-222ENST00000598256 DIP2BQ9P265 1576 aa24.91■■□□□ 1.58
LTBP4-222ENST00000598256 EHBP1L1Q8N3D4 1523 aa24.91■■□□□ 1.58
LTBP4-222ENST00000598256 MAGI3Q5TCQ9 1506 aa24.88■■□□□ 1.57
LTBP4-222ENST00000598256 CDK11AQ9UQ88 783 aaPredicted RBP24.87■■□□□ 1.57
LTBP4-222ENST00000598256 LRRC9Q6ZRR7 1453 aa24.85■■□□□ 1.57
LTBP4-222ENST00000598256 MTUS2Q5JR59 1369 aa24.85■■□□□ 1.57
LTBP4-222ENST00000598256 SUPT6HQ7KZ85 1726 aaKnown RBP24.85■■□□□ 1.57
LTBP4-222ENST00000598256 ASXL2Q76L83 1435 aa24.85■■□□□ 1.57
LTBP4-222ENST00000598256 WDR7Q9Y4E6 1490 aa24.84■■□□□ 1.57
LTBP4-222ENST00000598256 KIF14Q15058 1648 aa24.84■■□□□ 1.57
LTBP4-222ENST00000598256 TROQ12816 1431 aaPredicted RBP24.83■■□□□ 1.57
LTBP4-222ENST00000598256 PLEKHD1A6NEE1 506 aa24.82■■□□□ 1.56
LTBP4-222ENST00000598256 KDM6BO15054 1643 aa24.8■■□□□ 1.56
LTBP4-222ENST00000598256 ILDR1Q86SU0 546 aaPredicted RBP24.78■■□□□ 1.56
LTBP4-222ENST00000598256 KANK4Q5T7N3 995 aaPredicted RBP24.77■■□□□ 1.56
LTBP4-222ENST00000598256 TSPOAP1O95153 1857 aa24.72■■□□□ 1.55
LTBP4-222ENST00000598256 PPARGC1BQ86YN6 1023 aaKnown RBP24.72■■□□□ 1.55
LTBP4-222ENST00000598256 MYO5CQ9NQX4 1742 aa24.72■■□□□ 1.55
LTBP4-222ENST00000598256 TTC37Q6PGP7 1564 aa24.71■■□□□ 1.55
LTBP4-222ENST00000598256 ITSN2Q9NZM3 1697 aa24.71■■□□□ 1.55
LTBP4-222ENST00000598256 ABCA9Q8IUA7 1624 aa24.7■■□□□ 1.54
LTBP4-222ENST00000598256 KCNH8Q96L42 1107 aa24.69■■□□□ 1.54
LTBP4-222ENST00000598256 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.69■■□□□ 1.543e-6■■□□□ 13.1
LTBP4-222ENST00000598256 NCOA2Q15596 1464 aa24.69■■□□□ 1.54
LTBP4-222ENST00000598256 CDC42BPAQ5VT25 1732 aa24.69■■□□□ 1.54
LTBP4-222ENST00000598256 GLI2P10070 1586 aa24.66■■□□□ 1.54
LTBP4-222ENST00000598256 PREX2Q70Z35 1606 aa24.64■■□□□ 1.53
LTBP4-222ENST00000598256 MAP3K4Q9Y6R4 1608 aa24.64■■□□□ 1.53
LTBP4-222ENST00000598256 CDC42BPBQ9Y5S2 1711 aa24.61■■□□□ 1.53
LTBP4-222ENST00000598256 CCNB3Q8WWL7 1395 aa24.58■■□□□ 1.53
LTBP4-222ENST00000598256 PPRC1Q5VV67 1664 aaKnown RBP24.56■■□□□ 1.52
LTBP4-222ENST00000598256 PHLDB1Q86UU1 1377 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms