RNA–Protein interactions for RNA: ENST00000597723.5

NUP62-212, Transcript of nucleoporin 62, humanhuman

TSL 1 (best) BASIC

Gene NUP62, Length 1,824 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP62-212ENST00000597723 WDR97A6NE52 1622 aa22.7■■□□□ 1.22
NUP62-212ENST00000597723 KANK4Q5T7N3 995 aaPredicted RBP22.7■■□□□ 1.22
NUP62-212ENST00000597723 CENPBP07199 599 aaPredicted RBP22.66■■□□□ 1.22
NUP62-212ENST00000597723 SCAF1Q9H7N4 1312 aaKnown RBP22.63■■□□□ 1.21
NUP62-212ENST00000597723 CCNB3Q8WWL7 1395 aa22.62■■□□□ 1.21
NUP62-212ENST00000597723 ACIN1Q9UKV3 1341 aaKnown RBP22.62■■□□□ 1.21
NUP62-212ENST00000597723 TIAM1Q13009 1591 aa22.62■■□□□ 1.21
NUP62-212ENST00000597723 FHAD1B1AJZ9 1412 aa22.62■■□□□ 1.21
NUP62-212ENST00000597723 CUL7Q14999 1698 aa22.59■■□□□ 1.21
NUP62-212ENST00000597723 DHX57Q6P158 1386 aaKnown RBP22.59■■□□□ 1.21
NUP62-212ENST00000597723 ABCA5Q8WWZ7 1642 aa22.57■■□□□ 1.2
NUP62-212ENST00000597723 EFCAB5A4FU69 1503 aa22.53■■□□□ 1.2
NUP62-212ENST00000597723 CFAP43Q8NDM7 1665 aa22.52■■□□□ 1.2
NUP62-212ENST00000597723 LRRC9Q6ZRR7 1453 aa22.51■■□□□ 1.19
NUP62-212ENST00000597723 TARBP1Q13395 1621 aaKnown RBP22.51■■□□□ 1.19
NUP62-212ENST00000597723 CTTNBP2Q8WZ74 1663 aa22.48■■□□□ 1.19
NUP62-212ENST00000597723 NEUROD1Q13562 356 aa22.47■■□□□ 1.19
NUP62-212ENST00000597723 IFT140Q96RY7 1462 aa22.46■■□□□ 1.19
NUP62-212ENST00000597723 GAPVD1Q14C86 1478 aa22.45■■□□□ 1.18
NUP62-212ENST00000597723 AQRO60306 1485 aaKnown RBP eCLIP22.45■■□□□ 1.181e-7■■■□□ 18.3
NUP62-212ENST00000597723 TDRD9Q8NDG6 1382 aaKnown RBP22.45■■□□□ 1.18
NUP62-212ENST00000597723 FYCO1Q9BQS8 1478 aa22.44■■□□□ 1.18
NUP62-212ENST00000597723 PCF11O94913 1555 aaKnown RBP22.44■■□□□ 1.18
NUP62-212ENST00000597723 CASKIN1Q8WXD9 1431 aa22.4■■□□□ 1.18
NUP62-212ENST00000597723 PELP1Q8IZL8 1130 aaKnown RBP22.38■■□□□ 1.17
NUP62-212ENST00000597723 PBRM1Q86U86 1689 aa22.36■■□□□ 1.17
NUP62-212ENST00000597723 FMN1Q68DA7 1419 aa22.35■■□□□ 1.17
NUP62-212ENST00000597723 FHOD3Q2V2M9 1422 aa22.34■■□□□ 1.17
NUP62-212ENST00000597723 SETD5Q9C0A6 1442 aa22.33■■□□□ 1.17
NUP62-212ENST00000597723 RAB3GAP2Q9H2M9 1393 aa22.33■■□□□ 1.17
NUP62-212ENST00000597723 PHLDB1Q86UU1 1377 aa22.32■■□□□ 1.16
NUP62-212ENST00000597723 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.32■■□□□ 1.16
NUP62-212ENST00000597723 MIER1Q8N108 512 aa22.32■■□□□ 1.16
NUP62-212ENST00000597723 ITGAEP38570 1179 aa22.31■■□□□ 1.16
NUP62-212ENST00000597723 ZNF608Q9ULD9 1512 aaPredicted RBP22.3■■□□□ 1.16
NUP62-212ENST00000597723 P3H3Q8IVL6 736 aa22.3■■□□□ 1.16
NUP62-212ENST00000597723 SAMD9Q5K651 1589 aa22.27■■□□□ 1.15
NUP62-212ENST00000597723 ATP1B4Q9UN42 357 aaPredicted RBP22.26■■□□□ 1.15
NUP62-212ENST00000597723 GTF3C3Q9Y5Q9 886 aa22.26■■□□□ 1.15
NUP62-212ENST00000597723 ADAMTS12P58397 1594 aa22.25■■□□□ 1.15
NUP62-212ENST00000597723 FAM50AQ14320 339 aaKnown RBP22.24■■□□□ 1.15
NUP62-212ENST00000597723 EIF4G3O43432 1585 aaKnown RBP22.23■■□□□ 1.15
NUP62-212ENST00000597723 MAPKBP1O60336 1514 aa22.21■■□□□ 1.15
NUP62-212ENST00000597723 SNAPC4Q5SXM2 1469 aa22.21■■□□□ 1.15
NUP62-212ENST00000597723 GRIN2BQ13224 1484 aa22.2■■□□□ 1.14
NUP62-212ENST00000597723 YTHDC1Q96MU7 727 aaKnown RBP22.16■■□□□ 1.14
NUP62-212ENST00000597723 TIMELESSQ9UNS1 1208 aa22.16■■□□□ 1.14
NUP62-212ENST00000597723 MTUS2Q5JR59 1369 aa22.14■■□□□ 1.13
NUP62-212ENST00000597723 FGD6Q6ZV73 1430 aa22.13■■□□□ 1.13
NUP62-212ENST00000597723 SUPT6HQ7KZ85 1726 aaKnown RBP22.09■■□□□ 1.13
NUP62-212ENST00000597723 EHBP1L1Q8N3D4 1523 aa22.08■■□□□ 1.13
NUP62-212ENST00000597723 IQGAP2Q13576 1575 aa22.07■■□□□ 1.12
NUP62-212ENST00000597723 CCDC18Q5T9S5 1454 aa22.07■■□□□ 1.12
NUP62-212ENST00000597723 LRRIQ1Q96JM4 1722 aa22.06■■□□□ 1.12
NUP62-212ENST00000597723 MAGI1Q96QZ7 1491 aaPredicted RBP22.04■■□□□ 1.12
NUP62-212ENST00000597723 MYOM3Q5VTT5 1437 aa22.03■■□□□ 1.12
NUP62-212ENST00000597723 NCOA2Q15596 1464 aa22.03■■□□□ 1.12
NUP62-212ENST00000597723 HECW1Q76N89 1606 aa22■■□□□ 1.11
NUP62-212ENST00000597723 HFM1A2PYH4 1435 aa22■■□□□ 1.11
NUP62-212ENST00000597723 UGGT2Q9NYU1 1516 aa21.97■■□□□ 1.11
NUP62-212ENST00000597723 FBLN2P98095 1184 aa21.96■■□□□ 1.11
NUP62-212ENST00000597723 GRIN2AQ12879 1464 aa21.96■■□□□ 1.11
NUP62-212ENST00000597723 CHMP7Q8WUX9 453 aaPredicted RBP21.96■■□□□ 1.11
NUP62-212ENST00000597723 ARHGEF11O15085 1522 aa21.96■■□□□ 1.11
NUP62-212ENST00000597723 PTPN23Q9H3S7 1636 aa21.95■■□□□ 1.1
NUP62-212ENST00000597723 SYNJ2O15056 1496 aa21.95■■□□□ 1.1
NUP62-212ENST00000597723 UACAQ9BZF9 1416 aa21.94■■□□□ 1.1
NUP62-212ENST00000597723 SIN3AQ96ST3 1273 aa21.94■■□□□ 1.1
NUP62-212ENST00000597723 KIAA0586Q9BVV6 1533 aa21.92■■□□□ 1.1
NUP62-212ENST00000597723 TCOF1Q13428 1488 aaKnown RBP21.9■■□□□ 1.1
NUP62-212ENST00000597723 PPP1R15AO75807 674 aaPredicted RBP21.89■■□□□ 1.09
NUP62-212ENST00000597723 NAIPQ13075 1403 aa21.88■■□□□ 1.09
NUP62-212ENST00000597723 PTPRKQ15262 1439 aa21.88■■□□□ 1.09
NUP62-212ENST00000597723 EPRSP07814 1512 aaKnown RBP21.87■■□□□ 1.09
NUP62-212ENST00000597723 CHD1O14646 1710 aa21.86■■□□□ 1.09
NUP62-212ENST00000597723 KIAA0556O60303 1618 aa21.86■■□□□ 1.09
NUP62-212ENST00000597723 MAGI3Q5TCQ9 1506 aa21.85■■□□□ 1.09
NUP62-212ENST00000597723 CEP170Q5SW79 1584 aa21.85■■□□□ 1.09
NUP62-212ENST00000597723 AKNAQ7Z591 1439 aa21.85■■□□□ 1.09
NUP62-212ENST00000597723 TONSLQ96HA7 1378 aa21.84■■□□□ 1.09
NUP62-212ENST00000597723 MIA2Q96PC5 1412 aa21.84■■□□□ 1.09
NUP62-212ENST00000597723 DISP1Q96F81 1524 aa21.83■■□□□ 1.09
NUP62-212ENST00000597723 GCC2Q8IWJ2 1684 aa21.83■■□□□ 1.09
NUP62-212ENST00000597723 OSCARQ8IYS5 282 aa21.8■■□□□ 1.08
NUP62-212ENST00000597723 NUP160Q12769 1436 aa21.77■■□□□ 1.08
NUP62-212ENST00000597723 CDK13Q14004 1512 aaKnown RBP21.74■■□□□ 1.07
NUP62-212ENST00000597723 DDX10Q13206 875 aaKnown RBP21.71■■□□□ 1.07
NUP62-212ENST00000597723 RAPGEF6Q8TEU7 1601 aa21.69■■□□□ 1.06
NUP62-212ENST00000597723 CDK11AQ9UQ88 783 aaPredicted RBP21.69■■□□□ 1.06
NUP62-212ENST00000597723 RRP7BPQ9NSQ0 103 aa21.66■■□□□ 1.06
NUP62-212ENST00000597723 ROCK1Q13464 1354 aa21.66■■□□□ 1.06
NUP62-212ENST00000597723 CCER2I3L3R5 266 aa21.65■■□□□ 1.06
NUP62-212ENST00000597723 NUP153P49790 1475 aaKnown RBP21.65■■□□□ 1.06
NUP62-212ENST00000597723 CHIC2Q9UKJ5 165 aa21.63■■□□□ 1.05
NUP62-212ENST00000597723 CLASP1Q7Z460 1538 aa21.63■■□□□ 1.05
NUP62-212ENST00000597723 ANP32CO43423 234 aa21.62■■□□□ 1.05
NUP62-212ENST00000597723 DNMT1P26358 1616 aaKnown RBP21.62■■□□□ 1.05
NUP62-212ENST00000597723 TRIM52Q96A61 297 aa21.62■■□□□ 1.05
NUP62-212ENST00000597723 DAPK1P53355 1430 aa21.6■■□□□ 1.05
NUP62-212ENST00000597723 CARMIL2Q6F5E8 1435 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms