RNA–Protein interactions for RNA: ENST00000596900.5

SPTBN4-210, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 1 (best)

Gene SPTBN4, Length 1,857 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-210ENST00000596900 SYNJ2O15056 1496 aa36.1■■■■□ 3.37
SPTBN4-210ENST00000596900 ARAP1Q96P48 1450 aa36.08■■■■□ 3.37
SPTBN4-210ENST00000596900 GRIN2AQ12879 1464 aa36.07■■■■□ 3.36
SPTBN4-210ENST00000596900 EFCAB5A4FU69 1503 aa36.05■■■■□ 3.36
SPTBN4-210ENST00000596900 CHMP7Q8WUX9 453 aaPredicted RBP35.99■■■■□ 3.35
SPTBN4-210ENST00000596900 IQGAP2Q13576 1575 aa35.97■■■■□ 3.35
SPTBN4-210ENST00000596900 KIAA0586Q9BVV6 1533 aa35.89■■■■□ 3.34
SPTBN4-210ENST00000596900 SAMD9Q5K651 1589 aa35.88■■■■□ 3.33
SPTBN4-210ENST00000596900 FBLN2P98095 1184 aa35.86■■■■□ 3.33
SPTBN4-210ENST00000596900 APLP2Q06481 763 aa35.82■■■■□ 3.33
SPTBN4-210ENST00000596900 CEP170Q5SW79 1584 aa35.81■■■■□ 3.32
SPTBN4-210ENST00000596900 NUP160Q12769 1436 aa35.8■■■■□ 3.32
SPTBN4-210ENST00000596900 UGGT2Q9NYU1 1516 aa35.78■■■■□ 3.32
SPTBN4-210ENST00000596900 TRIM26Q12899 539 aaPredicted RBP35.77■■■■□ 3.32
SPTBN4-210ENST00000596900 FHOD3Q2V2M9 1422 aa35.77■■■■□ 3.32
SPTBN4-210ENST00000596900 P3H3Q8IVL6 736 aa35.74■■■■□ 3.31
SPTBN4-210ENST00000596900 CHD1O14646 1710 aa35.74■■■■□ 3.31
SPTBN4-210ENST00000596900 FMN1Q68DA7 1419 aa35.71■■■■□ 3.31
SPTBN4-210ENST00000596900 PPARGC1BQ86YN6 1023 aaKnown RBP35.7■■■■□ 3.31
SPTBN4-210ENST00000596900 PCGF6Q9BYE7 350 aa35.65■■■■□ 3.3
SPTBN4-210ENST00000596900 PCF11O94913 1555 aaKnown RBP35.63■■■■□ 3.29
SPTBN4-210ENST00000596900 FYCO1Q9BQS8 1478 aa35.6■■■■□ 3.29
SPTBN4-210ENST00000596900 KIAA0556O60303 1618 aa35.59■■■■□ 3.29
SPTBN4-210ENST00000596900 CASKIN1Q8WXD9 1431 aa35.57■■■■□ 3.29
SPTBN4-210ENST00000596900 MAP3K1Q13233 1512 aa35.56■■■■□ 3.28
SPTBN4-210ENST00000596900 DISP1Q96F81 1524 aa35.54■■■■□ 3.28
SPTBN4-210ENST00000596900 TIAM1Q13009 1591 aa35.49■■■■□ 3.27
SPTBN4-210ENST00000596900 CARMIL2Q6F5E8 1435 aa35.49■■■■□ 3.27
SPTBN4-210ENST00000596900 JPH4Q96JJ6 628 aa35.49■■■■□ 3.27
SPTBN4-210ENST00000596900 TTBK1Q5TCY1 1321 aaPredicted RBP35.48■■■■□ 3.27
SPTBN4-210ENST00000596900 CFAP43Q8NDM7 1665 aa35.46■■■■□ 3.27
SPTBN4-210ENST00000596900 ATP1B4Q9UN42 357 aaPredicted RBP35.41■■■■□ 3.26
SPTBN4-210ENST00000596900 HECW1Q76N89 1606 aa35.37■■■■□ 3.25
SPTBN4-210ENST00000596900 SHROOM2Q13796 1616 aa35.35■■■■□ 3.25
SPTBN4-210ENST00000596900 KANK4Q5T7N3 995 aaPredicted RBP35.34■■■■□ 3.25
SPTBN4-210ENST00000596900 LRRC9Q6ZRR7 1453 aa35.31■■■■□ 3.24
SPTBN4-210ENST00000596900 CLASP1Q7Z460 1538 aa35.31■■■■□ 3.24
SPTBN4-210ENST00000596900 CCDC18Q5T9S5 1454 aa35.3■■■■□ 3.24
SPTBN4-210ENST00000596900 PRG4Q92954 1404 aaPredicted RBP35.28■■■■□ 3.24
SPTBN4-210ENST00000596900 LRRIQ1Q96JM4 1722 aa35.27■■■■□ 3.24
SPTBN4-210ENST00000596900 RAPGEF6Q8TEU7 1601 aa35.24■■■■□ 3.23
SPTBN4-210ENST00000596900 EPRSP07814 1512 aaKnown RBP35.17■■■■□ 3.22
SPTBN4-210ENST00000596900 MTUS2Q5JR59 1369 aa35.12■■■■□ 3.21
SPTBN4-210ENST00000596900 EHBP1L1Q8N3D4 1523 aa35.1■■■■□ 3.21
SPTBN4-210ENST00000596900 NUP153P49790 1475 aaKnown RBP35.09■■■■□ 3.21
SPTBN4-210ENST00000596900 PLB1Q6P1J6 1458 aa35.09■■■■□ 3.21
SPTBN4-210ENST00000596900 PTPRGP23470 1445 aa35.08■■■■□ 3.21
SPTBN4-210ENST00000596900 ABCA8O94911 1581 aa35.06■■■■□ 3.2
SPTBN4-210ENST00000596900 CDK13Q14004 1512 aaKnown RBP35.04■■■■□ 3.2
SPTBN4-210ENST00000596900 RRBP1Q9P2E9 1410 aaKnown RBP35.01■■■■□ 3.2
SPTBN4-210ENST00000596900 OSCARQ8IYS5 282 aa35.01■■■■□ 3.2
SPTBN4-210ENST00000596900 SUPT6HQ7KZ85 1726 aaKnown RBP35■■■■□ 3.19
SPTBN4-210ENST00000596900 ERCC6L2Q5T890 1561 aa34.99■■■■□ 3.19
SPTBN4-210ENST00000596900 CDK11AQ9UQ88 783 aaPredicted RBP34.95■■■■□ 3.18
SPTBN4-210ENST00000596900 MAGI3Q5TCQ9 1506 aa34.94■■■■□ 3.18
SPTBN4-210ENST00000596900 PHLDB1Q86UU1 1377 aa34.92■■■■□ 3.18
SPTBN4-210ENST00000596900 CCNB3Q8WWL7 1395 aa34.92■■■■□ 3.18
SPTBN4-210ENST00000596900 ARID3CA6NKF2 412 aa34.9■■■■□ 3.18
SPTBN4-210ENST00000596900 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.89■■■■□ 3.18
SPTBN4-210ENST00000596900 HNRNPUL2Q1KMD3 747 aaKnown RBP34.89■■■■□ 3.18
SPTBN4-210ENST00000596900 UACAQ9BZF9 1416 aa34.89■■■■□ 3.18
SPTBN4-210ENST00000596900 NCOA2Q15596 1464 aa34.89■■■■□ 3.18
SPTBN4-210ENST00000596900 ARHGEF11O15085 1522 aa34.83■■■■□ 3.17
SPTBN4-210ENST00000596900 ABCC2Q92887 1545 aa34.81■■■■□ 3.16
SPTBN4-210ENST00000596900 ATP10BO94823 1461 aa34.79■■■■□ 3.16
SPTBN4-210ENST00000596900 TROQ12816 1431 aaPredicted RBP34.78■■■■□ 3.16
SPTBN4-210ENST00000596900 MYOM3Q5VTT5 1437 aa34.77■■■■□ 3.16
SPTBN4-210ENST00000596900 FGD6Q6ZV73 1430 aa34.74■■■■□ 3.15
SPTBN4-210ENST00000596900 UHRF1BP1LA0JNW5 1464 aa34.73■■■■□ 3.15
SPTBN4-210ENST00000596900 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.72■■■■□ 3.15
SPTBN4-210ENST00000596900 ADCY10Q96PN6 1610 aa34.72■■■■□ 3.15
SPTBN4-210ENST00000596900 PLEKHD1A6NEE1 506 aa34.69■■■■□ 3.14
SPTBN4-210ENST00000596900 FAM50AQ14320 339 aaKnown RBP34.65■■■■□ 3.14
SPTBN4-210ENST00000596900 KIF14Q15058 1648 aa34.63■■■■□ 3.13
SPTBN4-210ENST00000596900 MIA2Q96PC5 1412 aa34.61■■■■□ 3.13
SPTBN4-210ENST00000596900 PTPN23Q9H3S7 1636 aa34.59■■■■□ 3.13
SPTBN4-210ENST00000596900 ITSN2Q9NZM3 1697 aa34.58■■■■□ 3.13
SPTBN4-210ENST00000596900 KDM5BQ9UGL1 1544 aa34.57■■■■□ 3.12
SPTBN4-210ENST00000596900 ZCCHC11Q5TAX3 1644 aaKnown RBP34.56■■■■□ 3.12
SPTBN4-210ENST00000596900 HRCP23327 699 aa34.53■■■■□ 3.12
SPTBN4-210ENST00000596900 TCOF1Q13428 1488 aaKnown RBP34.53■■■■□ 3.12
SPTBN4-210ENST00000596900 ITGAEP38570 1179 aa34.52■■■■□ 3.12
SPTBN4-210ENST00000596900 ABCC10Q5T3U5 1492 aa34.44■■■■□ 3.1
SPTBN4-210ENST00000596900 GPATCH8Q9UKJ3 1502 aaKnown RBP34.43■■■■□ 3.1
SPTBN4-210ENST00000596900 CDC42BPAQ5VT25 1732 aa34.4■■■■□ 3.1
SPTBN4-210ENST00000596900 CCER1Q8TC90 406 aaPredicted RBP34.37■■■■□ 3.09
SPTBN4-210ENST00000596900 CFDP1Q9UEE9 299 aaPredicted RBP34.36■■■■□ 3.09
SPTBN4-210ENST00000596900 ZEB1P37275 1124 aaPredicted RBP34.35■■■■□ 3.09
SPTBN4-210ENST00000596900 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.29■■■■□ 3.08
SPTBN4-210ENST00000596900 PREX2Q70Z35 1606 aa34.29■■■■□ 3.08
SPTBN4-210ENST00000596900 CAMSAP2Q08AD1 1489 aa34.29■■■■□ 3.08
SPTBN4-210ENST00000596900 SETD5Q9C0A6 1442 aa34.27■■■■□ 3.08
SPTBN4-210ENST00000596900 NPM1P06748 294 aaKnown RBP eCLIP34.27■■■■□ 3.08
SPTBN4-210ENST00000596900 WDR7Q9Y4E6 1490 aa34.27■■■■□ 3.08
SPTBN4-210ENST00000596900 TTC37Q6PGP7 1564 aa34.27■■■■□ 3.08
SPTBN4-210ENST00000596900 RIMBP3CA6NJZ7 1639 aa34.26■■■■□ 3.08
SPTBN4-210ENST00000596900 RIMBP3BA6NNM3 1639 aa34.26■■■■□ 3.08
SPTBN4-210ENST00000596900 DNMT1P26358 1616 aaKnown RBP34.26■■■■□ 3.08
SPTBN4-210ENST00000596900 RIMBP3Q9UFD9 1639 aa34.26■■■■□ 3.08
SPTBN4-210ENST00000596900 MYO5CQ9NQX4 1742 aa34.25■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms