RNA–Protein interactions for RNA: ENST00000596217.1

NUP62-208, Transcript of nucleoporin 62, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NUP62, Length 3,590 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP62-208ENST00000596217 VPS8Q8N3P4 1428 aa17.41■□□□□ 0.38
NUP62-208ENST00000596217 PDS5BQ9NTI5 1447 aa17.41■□□□□ 0.38
NUP62-208ENST00000596217 CUX2O14529 1486 aa17.41■□□□□ 0.38
NUP62-208ENST00000596217 NBR1Q14596 966 aa17.41■□□□□ 0.38
NUP62-208ENST00000596217 CHMP7Q8WUX9 453 aaPredicted RBP17.4■□□□□ 0.38
NUP62-208ENST00000596217 ANP32CO43423 234 aa17.38■□□□□ 0.37
NUP62-208ENST00000596217 KIF27Q86VH2 1401 aa17.36■□□□□ 0.37
NUP62-208ENST00000596217 HIRIP3Q9BW71 556 aaPredicted RBP17.34■□□□□ 0.37
NUP62-208ENST00000596217 CEP164Q9UPV0 1460 aa17.31■□□□□ 0.36
NUP62-208ENST00000596217 HMGXB3Q12766 1538 aa17.31■□□□□ 0.36
NUP62-208ENST00000596217 CFTRP13569 1480 aa17.29■□□□□ 0.36
NUP62-208ENST00000596217 RAD54L2Q9Y4B4 1467 aa17.29■□□□□ 0.36
NUP62-208ENST00000596217 SALL2Q9Y467 1007 aaPredicted RBP17.27■□□□□ 0.35
NUP62-208ENST00000596217 HNRNPUQ00839 825 aaKnown RBP eCLIP17.27■□□□□ 0.35
NUP62-208ENST00000596217 CCER2I3L3R5 266 aa17.26■□□□□ 0.35
NUP62-208ENST00000596217 RTL5Q5HYW3 569 aaPredicted RBP17.25■□□□□ 0.35
NUP62-208ENST00000596217 CCDC136Q96JN2 1154 aa17.25■□□□□ 0.35
NUP62-208ENST00000596217 NOP58Q9Y2X3 529 aaKnown RBP17.24■□□□□ 0.35
NUP62-208ENST00000596217 FAM50AQ14320 339 aaKnown RBP17.24■□□□□ 0.35
NUP62-208ENST00000596217 CARMIL1Q5VZK9 1371 aa17.24■□□□□ 0.35
NUP62-208ENST00000596217 PEG3Q9GZU2 1588 aa17.23■□□□□ 0.35
NUP62-208ENST00000596217 KANK4Q5T7N3 995 aaPredicted RBP17.23■□□□□ 0.35
NUP62-208ENST00000596217 RTN4Q9NQC3 1192 aaKnown RBP17.21■□□□□ 0.35
NUP62-208ENST00000596217 PPP1R15AO75807 674 aaPredicted RBP17.21■□□□□ 0.35
NUP62-208ENST00000596217 FGD5Q6ZNL6 1462 aa17.2■□□□□ 0.34
NUP62-208ENST00000596217 SYNJ1O43426 1573 aa17.2■□□□□ 0.34
NUP62-208ENST00000596217 SIN3AQ96ST3 1273 aa17.18■□□□□ 0.34
NUP62-208ENST00000596217 ERICH6BQ5W0A0 696 aa17.18■□□□□ 0.34
NUP62-208ENST00000596217 PPP4R2Q9NY27 417 aa17.16■□□□□ 0.34
NUP62-208ENST00000596217 B4GALNT3Q6L9W6 998 aa17.15■□□□□ 0.34
NUP62-208ENST00000596217 RAPGEF2Q9Y4G8 1499 aa17.15■□□□□ 0.34
NUP62-208ENST00000596217 PAK3O75914 559 aaPredicted RBP17.14■□□□□ 0.33
NUP62-208ENST00000596217 KIF21BO75037 1637 aa17.14■□□□□ 0.33
NUP62-208ENST00000596217 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.14■□□□□ 0.33
NUP62-208ENST00000596217 AQRO60306 1485 aaKnown RBP eCLIP17.13■□□□□ 0.331e-7■■■□□ 18.3
NUP62-208ENST00000596217 RAB3GAP2Q9H2M9 1393 aa17.12■□□□□ 0.33
NUP62-208ENST00000596217 CCNB3Q8WWL7 1395 aa17.11■□□□□ 0.33
NUP62-208ENST00000596217 CUX1P39880 1505 aa17.11■□□□□ 0.33
NUP62-208ENST00000596217 IL27Q8NEV9 243 aa17.11■□□□□ 0.33
NUP62-208ENST00000596217 ANP32AP39687 249 aaKnown RBP17.09■□□□□ 0.33
NUP62-208ENST00000596217 WDR97A6NE52 1622 aa17.09■□□□□ 0.33
NUP62-208ENST00000596217 ZNF777Q9ULD5 760 aaPredicted RBP17.07■□□□□ 0.32
NUP62-208ENST00000596217 IGF1RP08069 1367 aa17.06■□□□□ 0.32
NUP62-208ENST00000596217 RRBP1Q9P2E9 1410 aaKnown RBP17.05■□□□□ 0.32
NUP62-208ENST00000596217 ZBTB47Q9UFB7 747 aaPredicted RBP17.05■□□□□ 0.32
NUP62-208ENST00000596217 TOPBP1Q92547 1522 aa17.03■□□□□ 0.32
NUP62-208ENST00000596217 POLA1P09884 1462 aaPredicted RBP17.01■□□□□ 0.31
NUP62-208ENST00000596217 MAPKBP1O60336 1514 aa17.01■□□□□ 0.31
NUP62-208ENST00000596217 EIF5BO60841 1220 aaKnown RBP16.98■□□□□ 0.31
NUP62-208ENST00000596217 IPO9Q96P70 1041 aaKnown RBP16.98■□□□□ 0.31
NUP62-208ENST00000596217 GAPVD1Q14C86 1478 aa16.96■□□□□ 0.31
NUP62-208ENST00000596217 SETD5Q9C0A6 1442 aa16.96■□□□□ 0.31
NUP62-208ENST00000596217 FAM9BQ8IZU0 186 aa16.95■□□□□ 0.3
NUP62-208ENST00000596217 URB2Q14146 1524 aaKnown RBP16.94■□□□□ 0.3
NUP62-208ENST00000596217 ARAP1Q96P48 1450 aa16.93■□□□□ 0.3
NUP62-208ENST00000596217 NPM2Q86SE8 214 aaKnown RBP16.93■□□□□ 0.3
NUP62-208ENST00000596217 CHIC2Q9UKJ5 165 aa16.93■□□□□ 0.3
NUP62-208ENST00000596217 TIMELESSQ9UNS1 1208 aa16.93■□□□□ 0.3
NUP62-208ENST00000596217 TONSLQ96HA7 1378 aa16.93■□□□□ 0.3
NUP62-208ENST00000596217 TOP2BQ02880 1626 aa16.92■□□□□ 0.3
NUP62-208ENST00000596217 UBE2Q2Q8WVN8 375 aa16.91■□□□□ 0.3
NUP62-208ENST00000596217 MRC2Q9UBG0 1479 aa16.91■□□□□ 0.3
NUP62-208ENST00000596217 LAMC3Q9Y6N6 1575 aa16.91■□□□□ 0.3
NUP62-208ENST00000596217 FHOD3Q2V2M9 1422 aa16.9■□□□□ 0.3
NUP62-208ENST00000596217 MTUS2Q5JR59 1369 aa16.89■□□□□ 0.29
NUP62-208ENST00000596217 LAS1LQ9Y4W2 734 aaKnown RBP16.89■□□□□ 0.29
NUP62-208ENST00000596217 NEFMP07197 916 aa16.88■□□□□ 0.29
NUP62-208ENST00000596217 JPH4Q96JJ6 628 aa16.87■□□□□ 0.29
NUP62-208ENST00000596217 ZNF608Q9ULD9 1512 aaPredicted RBP16.86■□□□□ 0.29
NUP62-208ENST00000596217 MRS2Q9HD23 443 aa16.84■□□□□ 0.29
NUP62-208ENST00000596217 DNMBPQ6XZF7 1577 aa16.82■□□□□ 0.28
NUP62-208ENST00000596217 CCDC184Q52MB2 194 aa16.81■□□□□ 0.28
NUP62-208ENST00000596217 NPM1P06748 294 aaKnown RBP eCLIP16.8■□□□□ 0.28
NUP62-208ENST00000596217 CNGB1Q14028 1251 aaPredicted RBP16.78■□□□□ 0.28
NUP62-208ENST00000596217 BRPF3Q9ULD4 1205 aa16.76■□□□□ 0.27
NUP62-208ENST00000596217 ZBED9Q6R2W3 1325 aa16.76■□□□□ 0.27
NUP62-208ENST00000596217 PLEKHD1A6NEE1 506 aa16.75■□□□□ 0.27
NUP62-208ENST00000596217 WASHC2AQ641Q2 1341 aa16.74■□□□□ 0.27
NUP62-208ENST00000596217 PRXQ9BXM0 1461 aa16.73■□□□□ 0.27
NUP62-208ENST00000596217 RRP7BPQ9NSQ0 103 aa16.73■□□□□ 0.27
NUP62-208ENST00000596217 USP35Q9P2H5 1018 aa16.73■□□□□ 0.27
NUP62-208ENST00000596217 SENP3-EIF4A1A0A087X0R7 540 aa16.72■□□□□ 0.27
NUP62-208ENST00000596217 HSPA5P11021 654 aaKnown RBP16.71■□□□□ 0.27
NUP62-208ENST00000596217 GRIN2BQ13224 1484 aa16.71■□□□□ 0.27
NUP62-208ENST00000596217 SNAPC4Q5SXM2 1469 aa16.71■□□□□ 0.27
NUP62-208ENST00000596217 KIF21AQ7Z4S6 1674 aa16.71■□□□□ 0.27
NUP62-208ENST00000596217 PPM1GO15355 546 aaPredicted RBP16.7■□□□□ 0.26
NUP62-208ENST00000596217 PHLDB1Q86UU1 1377 aa16.7■□□□□ 0.26
NUP62-208ENST00000596217 IFT140Q96RY7 1462 aa16.7■□□□□ 0.26
NUP62-208ENST00000596217 AKNAQ7Z591 1439 aa16.69■□□□□ 0.26
NUP62-208ENST00000596217 ABCA10Q8WWZ4 1543 aa16.69■□□□□ 0.26
NUP62-208ENST00000596217 CYB5RLQ6IPT4 315 aa16.68■□□□□ 0.26
NUP62-208ENST00000596217 ERICH3Q5RHP9 1530 aa16.68■□□□□ 0.26
NUP62-208ENST00000596217 PRKRIP1Q9H875 184 aaPredicted RBP16.68■□□□□ 0.26
NUP62-208ENST00000596217 ARHGAP35Q9NRY4 1499 aa16.66■□□□□ 0.26
NUP62-208ENST00000596217 EIF4G2P78344 907 aaKnown RBP eCLIP16.66■□□□□ 0.26
NUP62-208ENST00000596217 FHAD1B1AJZ9 1412 aa16.66■□□□□ 0.26
NUP62-208ENST00000596217 C11orf95C9JLR9 678 aaPredicted RBP16.66■□□□□ 0.26
NUP62-208ENST00000596217 OSCARQ8IYS5 282 aa16.66■□□□□ 0.26
NUP62-208ENST00000596217 CFDP1Q9UEE9 299 aaPredicted RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms