RNA–Protein interactions for RNA: ENST00000595566.1

LINC01872-202, Transcript of long intergenic non-protein coding RNA 1872, humanhuman

TSL 3

Gene LINC01872, Length 487 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01872-202ENST00000595566 PBRM1Q86U86 1689 aa13.83□□□□□ -0.2
LINC01872-202ENST00000595566 SHROOM2Q13796 1616 aa13.81□□□□□ -0.2
LINC01872-202ENST00000595566 GRIN2AQ12879 1464 aa13.8□□□□□ -0.2
LINC01872-202ENST00000595566 NUP160Q12769 1436 aa13.8□□□□□ -0.2
LINC01872-202ENST00000595566 PRG4Q92954 1404 aaPredicted RBP13.79□□□□□ -0.2
LINC01872-202ENST00000595566 COL17A1Q9UMD9 1497 aaPredicted RBP13.74□□□□□ -0.21
LINC01872-202ENST00000595566 ADCY10Q96PN6 1610 aa13.73□□□□□ -0.21
LINC01872-202ENST00000595566 JPH4Q96JJ6 628 aa13.72□□□□□ -0.21
LINC01872-202ENST00000595566 TOP2BQ02880 1626 aa13.71□□□□□ -0.22
LINC01872-202ENST00000595566 SPATA31D1Q6ZQQ2 1576 aa13.69□□□□□ -0.22
LINC01872-202ENST00000595566 CUX1P39880 1505 aa13.69□□□□□ -0.22
LINC01872-202ENST00000595566 PPRC1Q5VV67 1664 aaKnown RBP13.69□□□□□ -0.22
LINC01872-202ENST00000595566 CERKQ8TCT0 537 aa13.68□□□□□ -0.22
LINC01872-202ENST00000595566 ABCA5Q8WWZ7 1642 aa13.67□□□□□ -0.22
LINC01872-202ENST00000595566 ADAMTS12P58397 1594 aa13.65□□□□□ -0.22
LINC01872-202ENST00000595566 ABCA10Q8WWZ4 1543 aa13.62□□□□□ -0.23
LINC01872-202ENST00000595566 FHAD1B1AJZ9 1412 aa13.59□□□□□ -0.23
LINC01872-202ENST00000595566 GLI2P10070 1586 aa13.57□□□□□ -0.24
LINC01872-202ENST00000595566 ASXL2Q76L83 1435 aa13.55□□□□□ -0.24
LINC01872-202ENST00000595566 PTPRMP28827 1452 aa13.55□□□□□ -0.24
LINC01872-202ENST00000595566 PCF11O94913 1555 aaKnown RBP13.54□□□□□ -0.24
LINC01872-202ENST00000595566 PLB1Q6P1J6 1458 aa13.52□□□□□ -0.25
LINC01872-202ENST00000595566 TEX14Q8IWB6 1497 aa13.52□□□□□ -0.25
LINC01872-202ENST00000595566 TTBK1Q5TCY1 1321 aaPredicted RBP13.51□□□□□ -0.25
LINC01872-202ENST00000595566 HSPA2P54652 639 aa13.51□□□□□ -0.25
LINC01872-202ENST00000595566 KIF21BO75037 1637 aa13.5□□□□□ -0.25
LINC01872-202ENST00000595566 RUSC2Q8N2Y8 1516 aa13.48□□□□□ -0.25
LINC01872-202ENST00000595566 MAP3K4Q9Y6R4 1608 aa13.47□□□□□ -0.25
LINC01872-202ENST00000595566 ABCC2Q92887 1545 aa13.46□□□□□ -0.25
LINC01872-202ENST00000595566 EPRSP07814 1512 aaKnown RBP13.44□□□□□ -0.26
LINC01872-202ENST00000595566 PTPRGP23470 1445 aa13.44□□□□□ -0.26
LINC01872-202ENST00000595566 ADAMTSL3P82987 1691 aa13.42□□□□□ -0.26
LINC01872-202ENST00000595566 ERICH3Q5RHP9 1530 aa13.41□□□□□ -0.26
LINC01872-202ENST00000595566 CUL7Q14999 1698 aa13.4□□□□□ -0.26
LINC01872-202ENST00000595566 WRNQ14191 1432 aaPredicted RBP eCLIP13.39□□□□□ -0.27
LINC01872-202ENST00000595566 PLPPR3Q6T4P5 718 aa13.37□□□□□ -0.27
LINC01872-202ENST00000595566 KIAA0586Q9BVV6 1533 aa13.36□□□□□ -0.27
LINC01872-202ENST00000595566 MADDQ8WXG6 1647 aa13.33□□□□□ -0.28
LINC01872-202ENST00000595566 ARID4BQ4LE39 1312 aaPredicted RBP13.31□□□□□ -0.28
LINC01872-202ENST00000595566 TNIKQ9UKE5 1360 aa13.31□□□□□ -0.28
LINC01872-202ENST00000595566 UHRF1BP1LA0JNW5 1464 aa13.3□□□□□ -0.28
LINC01872-202ENST00000595566 CD109Q6YHK3 1445 aa13.3□□□□□ -0.28
LINC01872-202ENST00000595566 UACAQ9BZF9 1416 aa13.29□□□□□ -0.28
LINC01872-202ENST00000595566 BCORL1Q5H9F3 1711 aa13.28□□□□□ -0.28
LINC01872-202ENST00000595566 MAGI3Q5TCQ9 1506 aa13.28□□□□□ -0.28
LINC01872-202ENST00000595566 KDM5BQ9UGL1 1544 aa13.27□□□□□ -0.29
LINC01872-202ENST00000595566 RIMS1Q86UR5 1692 aaKnown RBP13.26□□□□□ -0.29
LINC01872-202ENST00000595566 ZCCHC11Q5TAX3 1644 aaKnown RBP13.24□□□□□ -0.29
LINC01872-202ENST00000595566 CARMIL2Q6F5E8 1435 aa13.23□□□□□ -0.29
LINC01872-202ENST00000595566 KCNH8Q96L42 1107 aa13.23□□□□□ -0.29
LINC01872-202ENST00000595566 WDR7Q9Y4E6 1490 aa13.23□□□□□ -0.29
LINC01872-202ENST00000595566 DMRT2Q9Y5R5 561 aa13.22□□□□□ -0.29
LINC01872-202ENST00000595566 ARAP3Q8WWN8 1544 aa13.2□□□□□ -0.3
LINC01872-202ENST00000595566 YEATS2Q9ULM3 1422 aa13.2□□□□□ -0.3
LINC01872-202ENST00000595566 CFAP43Q8NDM7 1665 aa13.19□□□□□ -0.3
LINC01872-202ENST00000595566 RAPGEF3O95398 923 aa13.19□□□□□ -0.3
LINC01872-202ENST00000595566 STRCQ7RTU9 1775 aa13.15□□□□□ -0.3
LINC01872-202ENST00000595566 MED1Q15648 1581 aaPredicted RBP13.15□□□□□ -0.3
LINC01872-202ENST00000595566 BIVM-ERCC5R4GMW8 1640 aa13.14□□□□□ -0.31
LINC01872-202ENST00000595566 UBAP1LF5GYI3 381 aa13.12□□□□□ -0.31
LINC01872-202ENST00000595566 LTBP4Q8N2S1 1624 aa13.12□□□□□ -0.31
LINC01872-202ENST00000595566 IQSEC2Q5JU85 1478 aa13.11□□□□□ -0.31
LINC01872-202ENST00000595566 PHF23Q9BUL5 403 aaPredicted RBP13.11□□□□□ -0.31
LINC01872-202ENST00000595566 DISP1Q96F81 1524 aa13.08□□□□□ -0.32
LINC01872-202ENST00000595566 PTPRTO14522 1441 aa13.07□□□□□ -0.32
LINC01872-202ENST00000595566 MLECQ14165 292 aa13.07□□□□□ -0.32
LINC01872-202ENST00000595566 IGF1RP08069 1367 aa13.07□□□□□ -0.32
LINC01872-202ENST00000595566 PHLDB1Q86UU1 1377 aa13.06□□□□□ -0.32
LINC01872-202ENST00000595566 PREX1Q8TCU6 1659 aa13.05□□□□□ -0.32
LINC01872-202ENST00000595566 HSPA1LP34931 641 aa13.05□□□□□ -0.32
LINC01872-202ENST00000595566 POGZQ7Z3K3 1410 aa13.05□□□□□ -0.32
LINC01872-202ENST00000595566 CEBPAP49715 358 aaPredicted RBP13.04□□□□□ -0.32
LINC01872-202ENST00000595566 IQGAP2Q13576 1575 aa13.03□□□□□ -0.32
LINC01872-202ENST00000595566 FRMPD1Q5SYB0 1578 aa13.03□□□□□ -0.32
LINC01872-202ENST00000595566 ARHGEF40Q8TER5 1519 aa13.01□□□□□ -0.33
LINC01872-202ENST00000595566 TTC37Q6PGP7 1564 aa13□□□□□ -0.33
LINC01872-202ENST00000595566 FANCAO15360 1455 aa13□□□□□ -0.33
LINC01872-202ENST00000595566 SCAF1Q9H7N4 1312 aaKnown RBP13□□□□□ -0.33
LINC01872-202ENST00000595566 FER1L4A9Z1Z3 1794 aa12.99□□□□□ -0.33
LINC01872-202ENST00000595566 UHRF1BP1Q6BDS2 1440 aa12.98□□□□□ -0.33
LINC01872-202ENST00000595566 SIGLEC1Q9BZZ2 1709 aa12.97□□□□□ -0.33
LINC01872-202ENST00000595566 NEO1Q92859 1461 aa12.97□□□□□ -0.33
LINC01872-202ENST00000595566 PIP4K2BP78356 416 aa12.96□□□□□ -0.33
LINC01872-202ENST00000595566 AKNAQ7Z591 1439 aa12.96□□□□□ -0.34
LINC01872-202ENST00000595566 CARMIL1Q5VZK9 1371 aa12.95□□□□□ -0.34
LINC01872-202ENST00000595566 ZNF335Q9H4Z2 1342 aaPredicted RBP12.94□□□□□ -0.34
LINC01872-202ENST00000595566 ARID3CA6NKF2 412 aa12.94□□□□□ -0.34
LINC01872-202ENST00000595566 KIAA0556O60303 1618 aa12.94□□□□□ -0.34
LINC01872-202ENST00000595566 UGGT2Q9NYU1 1516 aa12.92□□□□□ -0.34
LINC01872-202ENST00000595566 ABCA9Q8IUA7 1624 aa12.91□□□□□ -0.34
LINC01872-202ENST00000595566 SETD1BQ9UPS6 1966 aaKnown RBP12.9□□□□□ -0.34
LINC01872-202ENST00000595566 KIF27Q86VH2 1401 aa12.9□□□□□ -0.34
LINC01872-202ENST00000595566 RGS17Q9UGC6 210 aaPredicted RBP12.9□□□□□ -0.34
LINC01872-202ENST00000595566 DENND4BO75064 1496 aaPredicted RBP12.9□□□□□ -0.34
LINC01872-202ENST00000595566 ABCA8O94911 1581 aa12.88□□□□□ -0.35
LINC01872-202ENST00000595566 RICTORQ6R327 1708 aa12.88□□□□□ -0.35
LINC01872-202ENST00000595566 ARHGEF12Q9NZN5 1544 aa12.88□□□□□ -0.35
LINC01872-202ENST00000595566 NCOA1Q15788 1441 aa12.88□□□□□ -0.35
LINC01872-202ENST00000595566 ZFYVE16Q7Z3T8 1539 aa12.87□□□□□ -0.35
LINC01872-202ENST00000595566 FHOD3Q2V2M9 1422 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms