RNA–Protein interactions for RNA: ENST00000594513.1

ARHGEF1-209, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 325 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-209ENST00000594513 CLASP1Q7Z460 1538 aa19.08■□□□□ 0.64
ARHGEF1-209ENST00000594513 PHF23Q9BUL5 403 aaPredicted RBP19.03■□□□□ 0.64
ARHGEF1-209ENST00000594513 KIF21BO75037 1637 aa19.01■□□□□ 0.63
ARHGEF1-209ENST00000594513 KIAA0586Q9BVV6 1533 aa19■□□□□ 0.63
ARHGEF1-209ENST00000594513 JPH4Q96JJ6 628 aa19■□□□□ 0.63
ARHGEF1-209ENST00000594513 UBTFP17480 764 aaKnown RBP18.99■□□□□ 0.63
ARHGEF1-209ENST00000594513 RANGAP1P46060 587 aaPredicted RBP18.97■□□□□ 0.63
ARHGEF1-209ENST00000594513 GOLGA3Q08378 1498 aa18.97■□□□□ 0.63
ARHGEF1-209ENST00000594513 IQGAP2Q13576 1575 aa18.94■□□□□ 0.62
ARHGEF1-209ENST00000594513 CTTNBP2Q8WZ74 1663 aa18.93■□□□□ 0.62
ARHGEF1-209ENST00000594513 ARHGEF11O15085 1522 aa18.93■□□□□ 0.62
ARHGEF1-209ENST00000594513 ERCC6L2Q5T890 1561 aa18.93■□□□□ 0.62
ARHGEF1-209ENST00000594513 PRG4Q92954 1404 aaPredicted RBP18.92■□□□□ 0.62
ARHGEF1-209ENST00000594513 LOC105371045A0A1W2PR82 267 aa18.92■□□□□ 0.62
ARHGEF1-209ENST00000594513 RIMBP3CA6NJZ7 1639 aa18.92■□□□□ 0.62
ARHGEF1-209ENST00000594513 RIMBP3BA6NNM3 1639 aa18.92■□□□□ 0.62
ARHGEF1-209ENST00000594513 RIMBP3Q9UFD9 1639 aa18.92■□□□□ 0.62
ARHGEF1-209ENST00000594513 SHROOM2Q13796 1616 aa18.91■□□□□ 0.62
ARHGEF1-209ENST00000594513 TTBK1Q5TCY1 1321 aaPredicted RBP18.89■□□□□ 0.61
ARHGEF1-209ENST00000594513 P3H3Q8IVL6 736 aa18.85■□□□□ 0.61
ARHGEF1-209ENST00000594513 CYB5RLQ6IPT4 315 aa18.84■□□□□ 0.61
ARHGEF1-209ENST00000594513 UGGT2Q9NYU1 1516 aa18.83■□□□□ 0.6
ARHGEF1-209ENST00000594513 ARAP1Q96P48 1450 aa18.82■□□□□ 0.6
ARHGEF1-209ENST00000594513 CARMIL2Q6F5E8 1435 aa18.81■□□□□ 0.6
ARHGEF1-209ENST00000594513 DISP1Q96F81 1524 aa18.8■□□□□ 0.6
ARHGEF1-209ENST00000594513 TNIKQ9UKE5 1360 aa18.78■□□□□ 0.6
ARHGEF1-209ENST00000594513 KIAA0556O60303 1618 aa18.77■□□□□ 0.6
ARHGEF1-209ENST00000594513 PTPRGP23470 1445 aa18.73■□□□□ 0.59
ARHGEF1-209ENST00000594513 FHOD3Q2V2M9 1422 aa18.71■□□□□ 0.59
ARHGEF1-209ENST00000594513 SAMD9Q5K651 1589 aa18.7■□□□□ 0.58
ARHGEF1-209ENST00000594513 ARHGAP35Q9NRY4 1499 aa18.67■□□□□ 0.58
ARHGEF1-209ENST00000594513 CLIP1P30622 1438 aa18.66■□□□□ 0.58
ARHGEF1-209ENST00000594513 EFCAB5A4FU69 1503 aa18.65■□□□□ 0.58
ARHGEF1-209ENST00000594513 CEP162Q5TB80 1403 aa18.65■□□□□ 0.58
ARHGEF1-209ENST00000594513 PLB1Q6P1J6 1458 aa18.6■□□□□ 0.57
ARHGEF1-209ENST00000594513 UACAQ9BZF9 1416 aa18.59■□□□□ 0.57
ARHGEF1-209ENST00000594513 ARID3CA6NKF2 412 aa18.59■□□□□ 0.57
ARHGEF1-209ENST00000594513 ADCY10Q96PN6 1610 aa18.57■□□□□ 0.56
ARHGEF1-209ENST00000594513 ATP1B4Q9UN42 357 aaPredicted RBP18.56■□□□□ 0.56
ARHGEF1-209ENST00000594513 ABCA8O94911 1581 aa18.54■□□□□ 0.56
ARHGEF1-209ENST00000594513 NPM1P06748 294 aaKnown RBP eCLIP18.53■□□□□ 0.56
ARHGEF1-209ENST00000594513 ABCC2Q92887 1545 aa18.53■□□□□ 0.56
ARHGEF1-209ENST00000594513 UHRF1BP1LA0JNW5 1464 aa18.51■□□□□ 0.55
ARHGEF1-209ENST00000594513 FMN1Q68DA7 1419 aa18.5■□□□□ 0.55
ARHGEF1-209ENST00000594513 RAPGEF6Q8TEU7 1601 aa18.5■□□□□ 0.55
ARHGEF1-209ENST00000594513 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.48■□□□□ 0.55
ARHGEF1-209ENST00000594513 HNRNPUL2Q1KMD3 747 aaKnown RBP18.48■□□□□ 0.55
ARHGEF1-209ENST00000594513 NUP153P49790 1475 aaKnown RBP18.45■□□□□ 0.54
ARHGEF1-209ENST00000594513 PCF11O94913 1555 aaKnown RBP18.43■□□□□ 0.54
ARHGEF1-209ENST00000594513 ZCCHC11Q5TAX3 1644 aaKnown RBP18.43■□□□□ 0.54
ARHGEF1-209ENST00000594513 KDM5BQ9UGL1 1544 aa18.43■□□□□ 0.54
ARHGEF1-209ENST00000594513 ATP10BO94823 1461 aa18.42■□□□□ 0.54
ARHGEF1-209ENST00000594513 CASKIN1Q8WXD9 1431 aa18.4■□□□□ 0.54
ARHGEF1-209ENST00000594513 HECW1Q76N89 1606 aa18.4■□□□□ 0.54
ARHGEF1-209ENST00000594513 CDK13Q14004 1512 aaKnown RBP18.39■□□□□ 0.54
ARHGEF1-209ENST00000594513 TRHP20396 242 aaPredicted RBP18.39■□□□□ 0.53
ARHGEF1-209ENST00000594513 ASXL2Q76L83 1435 aa18.38■□□□□ 0.53
ARHGEF1-209ENST00000594513 VPS8Q8N3P4 1428 aa18.37■□□□□ 0.53
ARHGEF1-209ENST00000594513 EPRSP07814 1512 aaKnown RBP18.36■□□□□ 0.53
ARHGEF1-209ENST00000594513 FYCO1Q9BQS8 1478 aa18.36■□□□□ 0.53
ARHGEF1-209ENST00000594513 KCNH8Q96L42 1107 aa18.35■□□□□ 0.53
ARHGEF1-209ENST00000594513 MAPKBP1O60336 1514 aa18.34■□□□□ 0.53
ARHGEF1-209ENST00000594513 LRRIQ1Q96JM4 1722 aa18.34■□□□□ 0.53
ARHGEF1-209ENST00000594513 FAM69CQ0P6D2 419 aa18.32■□□□□ 0.52
ARHGEF1-209ENST00000594513 PLEKHD1A6NEE1 506 aa18.31■□□□□ 0.52
ARHGEF1-209ENST00000594513 WDR7Q9Y4E6 1490 aa18.3■□□□□ 0.52
ARHGEF1-209ENST00000594513 ABCC10Q5T3U5 1492 aa18.27■□□□□ 0.52
ARHGEF1-209ENST00000594513 CCDC18Q5T9S5 1454 aa18.27■□□□□ 0.52
ARHGEF1-209ENST00000594513 CDK11AQ9UQ88 783 aaPredicted RBP18.26■□□□□ 0.51
ARHGEF1-209ENST00000594513 DIP2BQ9P265 1576 aa18.25■□□□□ 0.51
ARHGEF1-209ENST00000594513 APLP2Q06481 763 aa18.23■□□□□ 0.51
ARHGEF1-209ENST00000594513 MAGI3Q5TCQ9 1506 aa18.22■□□□□ 0.51
ARHGEF1-209ENST00000594513 KIF13AQ9H1H9 1805 aa18.21■□□□□ 0.51
ARHGEF1-209ENST00000594513 TROQ12816 1431 aaPredicted RBP18.2■□□□□ 0.5
ARHGEF1-209ENST00000594513 MTUS2Q5JR59 1369 aa18.19■□□□□ 0.5
ARHGEF1-209ENST00000594513 TIAM1Q13009 1591 aa18.18■□□□□ 0.5
ARHGEF1-209ENST00000594513 KANK4Q5T7N3 995 aaPredicted RBP18.18■□□□□ 0.5
ARHGEF1-209ENST00000594513 CFAP43Q8NDM7 1665 aa18.17■□□□□ 0.5
ARHGEF1-209ENST00000594513 GLI2P10070 1586 aa18.16■□□□□ 0.5
ARHGEF1-209ENST00000594513 TSPOAP1O95153 1857 aa18.16■□□□□ 0.5
ARHGEF1-209ENST00000594513 KIF14Q15058 1648 aa18.16■□□□□ 0.5
ARHGEF1-209ENST00000594513 PPARGC1BQ86YN6 1023 aaKnown RBP18.15■□□□□ 0.5
ARHGEF1-209ENST00000594513 CD109Q6YHK3 1445 aa18.14■□□□□ 0.49
ARHGEF1-209ENST00000594513 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.13■□□□□ 0.49
ARHGEF1-209ENST00000594513 LRRC9Q6ZRR7 1453 aa18.12■□□□□ 0.49
ARHGEF1-209ENST00000594513 TTC37Q6PGP7 1564 aa18.12■□□□□ 0.49
ARHGEF1-209ENST00000594513 MAP3K1Q13233 1512 aa18.11■□□□□ 0.49
ARHGEF1-209ENST00000594513 EHBP1L1Q8N3D4 1523 aa18.11■□□□□ 0.49
ARHGEF1-209ENST00000594513 ABCA9Q8IUA7 1624 aa18.11■□□□□ 0.49
ARHGEF1-209ENST00000594513 MAP3K4Q9Y6R4 1608 aa18.1■□□□□ 0.49
ARHGEF1-209ENST00000594513 PPRC1Q5VV67 1664 aaKnown RBP18.06■□□□□ 0.48
ARHGEF1-209ENST00000594513 NCOA2Q15596 1464 aa18.04■□□□□ 0.48
ARHGEF1-209ENST00000594513 CCNB3Q8WWL7 1395 aa18.04■□□□□ 0.48
ARHGEF1-209ENST00000594513 FOXD1Q16676 465 aa18.03■□□□□ 0.48
ARHGEF1-209ENST00000594513 SUPT6HQ7KZ85 1726 aaKnown RBP18.03■□□□□ 0.48
ARHGEF1-209ENST00000594513 PLCH2O75038 1416 aa18.02■□□□□ 0.48
ARHGEF1-209ENST00000594513 ZNF777Q9ULD5 760 aaPredicted RBP18.01■□□□□ 0.47
ARHGEF1-209ENST00000594513 TEX14Q8IWB6 1497 aa18.01■□□□□ 0.47
ARHGEF1-209ENST00000594513 MYO5CQ9NQX4 1742 aa18.01■□□□□ 0.47
ARHGEF1-209ENST00000594513 ARHGAP5Q13017 1502 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms