RNA–Protein interactions for RNA: ENST00000593891.1

ZNF558-202, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 292 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-202ENST00000593891 PBRM1Q86U86 1689 aa22.59■■□□□ 1.21
ZNF558-202ENST00000593891 PRG4Q92954 1404 aaPredicted RBP22.59■■□□□ 1.21
ZNF558-202ENST00000593891 SHROOM2Q13796 1616 aa22.59■■□□□ 1.21
ZNF558-202ENST00000593891 DISP3Q9P2K9 1392 aa22.55■■□□□ 1.2
ZNF558-202ENST00000593891 TSPOAP1O95153 1857 aa22.54■■□□□ 1.2
ZNF558-202ENST00000593891 JPH4Q96JJ6 628 aa22.52■■□□□ 1.2
ZNF558-202ENST00000593891 CUX1P39880 1505 aa22.47■■□□□ 1.19
ZNF558-202ENST00000593891 ABCA10Q8WWZ4 1543 aa22.42■■□□□ 1.18
ZNF558-202ENST00000593891 ABCA5Q8WWZ7 1642 aa22.42■■□□□ 1.18
ZNF558-202ENST00000593891 FHAD1B1AJZ9 1412 aa22.39■■□□□ 1.17
ZNF558-202ENST00000593891 ADCY10Q96PN6 1610 aa22.39■■□□□ 1.17
ZNF558-202ENST00000593891 ADAMTS12P58397 1594 aa22.38■■□□□ 1.17
ZNF558-202ENST00000593891 TOP2BQ02880 1626 aa22.36■■□□□ 1.17
ZNF558-202ENST00000593891 COL17A1Q9UMD9 1497 aaPredicted RBP22.32■■□□□ 1.16
ZNF558-202ENST00000593891 CERKQ8TCT0 537 aa22.22■■□□□ 1.15
ZNF558-202ENST00000593891 GLI2P10070 1586 aa22.21■■□□□ 1.15
ZNF558-202ENST00000593891 PLB1Q6P1J6 1458 aa22.21■■□□□ 1.15
ZNF558-202ENST00000593891 PPRC1Q5VV67 1664 aaKnown RBP22.2■■□□□ 1.15
ZNF558-202ENST00000593891 TEX14Q8IWB6 1497 aa22.18■■□□□ 1.14
ZNF558-202ENST00000593891 ASXL2Q76L83 1435 aa22.17■■□□□ 1.14
ZNF558-202ENST00000593891 WRNQ14191 1432 aaPredicted RBP eCLIP22.14■■□□□ 1.13
ZNF558-202ENST00000593891 ERICH3Q5RHP9 1530 aa22.11■■□□□ 1.13
ZNF558-202ENST00000593891 PTPRGP23470 1445 aa22.09■■□□□ 1.13
ZNF558-202ENST00000593891 ABCC2Q92887 1545 aa22.09■■□□□ 1.13
ZNF558-202ENST00000593891 RUSC2Q8N2Y8 1516 aa22.08■■□□□ 1.13
ZNF558-202ENST00000593891 TTBK1Q5TCY1 1321 aaPredicted RBP22.06■■□□□ 1.12
ZNF558-202ENST00000593891 SPATA31D1Q6ZQQ2 1576 aa22.06■■□□□ 1.12
ZNF558-202ENST00000593891 PTPRMP28827 1452 aa22.04■■□□□ 1.12
ZNF558-202ENST00000593891 PCF11O94913 1555 aaKnown RBP22.01■■□□□ 1.11
ZNF558-202ENST00000593891 EPRSP07814 1512 aaKnown RBP22.01■■□□□ 1.11
ZNF558-202ENST00000593891 MAP3K4Q9Y6R4 1608 aa21.97■■□□□ 1.11
ZNF558-202ENST00000593891 KIAA0586Q9BVV6 1533 aa21.96■■□□□ 1.11
ZNF558-202ENST00000593891 TNIKQ9UKE5 1360 aa21.91■■□□□ 1.1
ZNF558-202ENST00000593891 HSPA2P54652 639 aa21.91■■□□□ 1.1
ZNF558-202ENST00000593891 KIF21BO75037 1637 aa21.88■■□□□ 1.09
ZNF558-202ENST00000593891 UHRF1BP1LA0JNW5 1464 aa21.88■■□□□ 1.09
ZNF558-202ENST00000593891 CARMIL2Q6F5E8 1435 aa21.86■■□□□ 1.09
ZNF558-202ENST00000593891 UACAQ9BZF9 1416 aa21.84■■□□□ 1.09
ZNF558-202ENST00000593891 CUL7Q14999 1698 aa21.83■■□□□ 1.09
ZNF558-202ENST00000593891 ADAMTSL3P82987 1691 aa21.82■■□□□ 1.08
ZNF558-202ENST00000593891 CD109Q6YHK3 1445 aa21.79■■□□□ 1.08
ZNF558-202ENST00000593891 MAGI3Q5TCQ9 1506 aa21.78■■□□□ 1.08
ZNF558-202ENST00000593891 KDM5BQ9UGL1 1544 aa21.78■■□□□ 1.08
ZNF558-202ENST00000593891 ARID4BQ4LE39 1312 aaPredicted RBP21.77■■□□□ 1.07
ZNF558-202ENST00000593891 WDR7Q9Y4E6 1490 aa21.71■■□□□ 1.07
ZNF558-202ENST00000593891 KCNH8Q96L42 1107 aa21.69■■□□□ 1.06
ZNF558-202ENST00000593891 DMRT2Q9Y5R5 561 aa21.69■■□□□ 1.06
ZNF558-202ENST00000593891 PLPPR3Q6T4P5 718 aa21.68■■□□□ 1.06
ZNF558-202ENST00000593891 BIVM-ERCC5R4GMW8 1640 aa21.66■■□□□ 1.06
ZNF558-202ENST00000593891 MADDQ8WXG6 1647 aa21.66■■□□□ 1.06
ZNF558-202ENST00000593891 ARAP3Q8WWN8 1544 aa21.65■■□□□ 1.06
ZNF558-202ENST00000593891 ZCCHC11Q5TAX3 1644 aaKnown RBP21.63■■□□□ 1.05
ZNF558-202ENST00000593891 BCORL1Q5H9F3 1711 aa21.61■■□□□ 1.05
ZNF558-202ENST00000593891 CFAP43Q8NDM7 1665 aa21.59■■□□□ 1.05
ZNF558-202ENST00000593891 IGF1RP08069 1367 aa21.57■■□□□ 1.04
ZNF558-202ENST00000593891 PHLDB1Q86UU1 1377 aa21.56■■□□□ 1.04
ZNF558-202ENST00000593891 RAPGEF3O95398 923 aa21.55■■□□□ 1.04
ZNF558-202ENST00000593891 YEATS2Q9ULM3 1422 aa21.55■■□□□ 1.04
ZNF558-202ENST00000593891 RIMS1Q86UR5 1692 aaKnown RBP21.53■■□□□ 1.04
ZNF558-202ENST00000593891 DISP1Q96F81 1524 aa21.49■■□□□ 1.03
ZNF558-202ENST00000593891 IQGAP2Q13576 1575 aa21.46■■□□□ 1.03
ZNF558-202ENST00000593891 POGZQ7Z3K3 1410 aa21.45■■□□□ 1.02
ZNF558-202ENST00000593891 IQSEC2Q5JU85 1478 aa21.43■■□□□ 1.02
ZNF558-202ENST00000593891 CARMIL1Q5VZK9 1371 aa21.4■■□□□ 1.02
ZNF558-202ENST00000593891 KIF27Q86VH2 1401 aa21.39■■□□□ 1.02
ZNF558-202ENST00000593891 UBAP1LF5GYI3 381 aa21.36■■□□□ 1.01
ZNF558-202ENST00000593891 PTPRTO14522 1441 aa21.36■■□□□ 1.01
ZNF558-202ENST00000593891 MLECQ14165 292 aa21.33■■□□□ 1.01
ZNF558-202ENST00000593891 FANCAO15360 1455 aa21.32■■□□□ 1
ZNF558-202ENST00000593891 NEO1Q92859 1461 aa21.32■■□□□ 1
ZNF558-202ENST00000593891 PHF23Q9BUL5 403 aaPredicted RBP21.3■■□□□ 1
ZNF558-202ENST00000593891 UGGT2Q9NYU1 1516 aa21.29■■□□□ 1
ZNF558-202ENST00000593891 LTBP4Q8N2S1 1624 aa21.29■■□□□ 1
ZNF558-202ENST00000593891 STRCQ7RTU9 1775 aa21.28■■□□□ 1
ZNF558-202ENST00000593891 AKNAQ7Z591 1439 aa21.28■■□□□ 1
ZNF558-202ENST00000593891 ARHGEF40Q8TER5 1519 aa21.27■■□□□ 1
ZNF558-202ENST00000593891 KIAA0556O60303 1618 aa21.26■□□□□ 0.99
ZNF558-202ENST00000593891 PREX1Q8TCU6 1659 aa21.25■□□□□ 0.99
ZNF558-202ENST00000593891 MED1Q15648 1581 aaPredicted RBP21.25■□□□□ 0.99
ZNF558-202ENST00000593891 UHRF1BP1Q6BDS2 1440 aa21.25■□□□□ 0.99
ZNF558-202ENST00000593891 FRMPD1Q5SYB0 1578 aa21.24■□□□□ 0.99
ZNF558-202ENST00000593891 CEBPAP49715 358 aaPredicted RBP21.24■□□□□ 0.99
ZNF558-202ENST00000593891 TTC37Q6PGP7 1564 aa21.23■□□□□ 0.99
ZNF558-202ENST00000593891 DENND4BO75064 1496 aaPredicted RBP21.2■□□□□ 0.98
ZNF558-202ENST00000593891 HSPA1LP34931 641 aa21.18■□□□□ 0.98
ZNF558-202ENST00000593891 ABCA9Q8IUA7 1624 aa21.18■□□□□ 0.98
ZNF558-202ENST00000593891 FAM9AQ8IZU1 332 aaPredicted RBP21.17■□□□□ 0.98
ZNF558-202ENST00000593891 ABCA8O94911 1581 aa21.17■□□□□ 0.98
ZNF558-202ENST00000593891 ARID3CA6NKF2 412 aa21.16■□□□□ 0.98
ZNF558-202ENST00000593891 FHOD3Q2V2M9 1422 aa21.13■□□□□ 0.97
ZNF558-202ENST00000593891 FER1L4A9Z1Z3 1794 aa21.13■□□□□ 0.97
ZNF558-202ENST00000593891 SCAF1Q9H7N4 1312 aaKnown RBP21.13■□□□□ 0.97
ZNF558-202ENST00000593891 ZFYVE16Q7Z3T8 1539 aa21.09■□□□□ 0.97
ZNF558-202ENST00000593891 GOLGA3Q08378 1498 aa21.08■□□□□ 0.97
ZNF558-202ENST00000593891 EFCAB5A4FU69 1503 aa21.08■□□□□ 0.96
ZNF558-202ENST00000593891 ARHGEF12Q9NZN5 1544 aa21.07■□□□□ 0.96
ZNF558-202ENST00000593891 ATP10BO94823 1461 aa21.07■□□□□ 0.96
ZNF558-202ENST00000593891 MAGI2Q86UL8 1455 aa21.07■□□□□ 0.96
ZNF558-202ENST00000593891 ZNF335Q9H4Z2 1342 aaPredicted RBP21.06■□□□□ 0.96
ZNF558-202ENST00000593891 PIP4K2BP78356 416 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms