RNA–Protein interactions for RNA: ENST00000592937.1

GADD45B-206, Transcript of growth arrest and DNA damage inducible beta, humanhuman

TSL 2

Gene GADD45B, Length 2,007 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GADD45B-206ENST00000592937 CHD1O14646 1710 aa25.82■■□□□ 1.72
GADD45B-206ENST00000592937 CHMP7Q8WUX9 453 aaPredicted RBP25.81■■□□□ 1.72
GADD45B-206ENST00000592937 FBLN2P98095 1184 aa25.8■■□□□ 1.72
GADD45B-206ENST00000592937 ARHGAP35Q9NRY4 1499 aa25.79■■□□□ 1.72
GADD45B-206ENST00000592937 CEP170Q5SW79 1584 aa25.78■■□□□ 1.72
GADD45B-206ENST00000592937 ARAP1Q96P48 1450 aa25.76■■□□□ 1.71
GADD45B-206ENST00000592937 IQGAP2Q13576 1575 aa25.76■■□□□ 1.71
GADD45B-206ENST00000592937 PCGF6Q9BYE7 350 aa25.75■■□□□ 1.71
GADD45B-206ENST00000592937 NUP160Q12769 1436 aa25.7■■□□□ 1.7
GADD45B-206ENST00000592937 KIAA0586Q9BVV6 1533 aa25.68■■□□□ 1.7
GADD45B-206ENST00000592937 EFCAB5A4FU69 1503 aa25.68■■□□□ 1.7
GADD45B-206ENST00000592937 TRIM26Q12899 539 aaPredicted RBP25.68■■□□□ 1.7
GADD45B-206ENST00000592937 SAMD9Q5K651 1589 aa25.67■■□□□ 1.7
GADD45B-206ENST00000592937 VPS8Q8N3P4 1428 aa25.66■■□□□ 1.7
GADD45B-206ENST00000592937 P3H3Q8IVL6 736 aa25.62■■□□□ 1.69
GADD45B-206ENST00000592937 UGGT2Q9NYU1 1516 aa25.6■■□□□ 1.69
GADD45B-206ENST00000592937 FHOD3Q2V2M9 1422 aa25.6■■□□□ 1.69
GADD45B-206ENST00000592937 HRCP23327 699 aa25.57■■□□□ 1.68
GADD45B-206ENST00000592937 KIAA0556O60303 1618 aa25.52■■□□□ 1.68
GADD45B-206ENST00000592937 DISP1Q96F81 1524 aa25.51■■□□□ 1.67
GADD45B-206ENST00000592937 PCF11O94913 1555 aaKnown RBP25.48■■□□□ 1.67
GADD45B-206ENST00000592937 PPARGC1BQ86YN6 1023 aaKnown RBP25.47■■□□□ 1.67
GADD45B-206ENST00000592937 JPH4Q96JJ6 628 aa25.45■■□□□ 1.66
GADD45B-206ENST00000592937 CLASP1Q7Z460 1538 aa25.45■■□□□ 1.66
GADD45B-206ENST00000592937 SHROOM2Q13796 1616 aa25.43■■□□□ 1.66
GADD45B-206ENST00000592937 FMN1Q68DA7 1419 aa25.41■■□□□ 1.66
GADD45B-206ENST00000592937 FYCO1Q9BQS8 1478 aa25.35■■□□□ 1.65
GADD45B-206ENST00000592937 CASKIN1Q8WXD9 1431 aa25.35■■□□□ 1.65
GADD45B-206ENST00000592937 LRRIQ1Q96JM4 1722 aa25.35■■□□□ 1.65
GADD45B-206ENST00000592937 CARMIL2Q6F5E8 1435 aa25.35■■□□□ 1.65
GADD45B-206ENST00000592937 PRG4Q92954 1404 aaPredicted RBP25.35■■□□□ 1.65
GADD45B-206ENST00000592937 TTBK1Q5TCY1 1321 aaPredicted RBP25.33■■□□□ 1.65
GADD45B-206ENST00000592937 ERCC6L2Q5T890 1561 aa25.31■■□□□ 1.64
GADD45B-206ENST00000592937 APLP2Q06481 763 aa25.31■■□□□ 1.64
GADD45B-206ENST00000592937 CFAP43Q8NDM7 1665 aa25.3■■□□□ 1.64
GADD45B-206ENST00000592937 TIAM1Q13009 1591 aa25.29■■□□□ 1.64
GADD45B-206ENST00000592937 ATP1B4Q9UN42 357 aaPredicted RBP25.29■■□□□ 1.64
GADD45B-206ENST00000592937 HECW1Q76N89 1606 aa25.24■■□□□ 1.63
GADD45B-206ENST00000592937 RAPGEF6Q8TEU7 1601 aa25.23■■□□□ 1.63
GADD45B-206ENST00000592937 MAP3K1Q13233 1512 aa25.23■■□□□ 1.63
GADD45B-206ENST00000592937 KANK4Q5T7N3 995 aaPredicted RBP25.22■■□□□ 1.63
GADD45B-206ENST00000592937 OSCARQ8IYS5 282 aa25.22■■□□□ 1.63
GADD45B-206ENST00000592937 PLB1Q6P1J6 1458 aa25.19■■□□□ 1.62
GADD45B-206ENST00000592937 NUP153P49790 1475 aaKnown RBP25.14■■□□□ 1.62
GADD45B-206ENST00000592937 LRRC9Q6ZRR7 1453 aa25.14■■□□□ 1.62
GADD45B-206ENST00000592937 ABCA8O94911 1581 aa25.14■■□□□ 1.62
GADD45B-206ENST00000592937 EPRSP07814 1512 aaKnown RBP25.14■■□□□ 1.61
GADD45B-206ENST00000592937 CDK13Q14004 1512 aaKnown RBP25.14■■□□□ 1.61
GADD45B-206ENST00000592937 PTPRGP23470 1445 aa25.13■■□□□ 1.61
GADD45B-206ENST00000592937 CCDC18Q5T9S5 1454 aa25.12■■□□□ 1.61
GADD45B-206ENST00000592937 ARID3CA6NKF2 412 aa25.1■■□□□ 1.61
GADD45B-206ENST00000592937 MAGI3Q5TCQ9 1506 aa25.07■■□□□ 1.6
GADD45B-206ENST00000592937 UACAQ9BZF9 1416 aa25■■□□□ 1.59
GADD45B-206ENST00000592937 MTUS2Q5JR59 1369 aa24.99■■□□□ 1.59
GADD45B-206ENST00000592937 EHBP1L1Q8N3D4 1523 aa24.99■■□□□ 1.59
GADD45B-206ENST00000592937 ABCC2Q92887 1545 aa24.97■■□□□ 1.59
GADD45B-206ENST00000592937 ATP10BO94823 1461 aa24.95■■□□□ 1.58
GADD45B-206ENST00000592937 SUPT6HQ7KZ85 1726 aaKnown RBP24.94■■□□□ 1.58
GADD45B-206ENST00000592937 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.93■■□□□ 1.58
GADD45B-206ENST00000592937 HNRNPUL2Q1KMD3 747 aaKnown RBP24.93■■□□□ 1.58
GADD45B-206ENST00000592937 PHLDB1Q86UU1 1377 aa24.91■■□□□ 1.58
GADD45B-206ENST00000592937 ARHGEF11O15085 1522 aa24.9■■□□□ 1.58
GADD45B-206ENST00000592937 ZEB1P37275 1124 aaPredicted RBP24.9■■□□□ 1.58
GADD45B-206ENST00000592937 ADCY10Q96PN6 1610 aa24.89■■□□□ 1.58
GADD45B-206ENST00000592937 NCOA2Q15596 1464 aa24.89■■□□□ 1.57
GADD45B-206ENST00000592937 UHRF1BP1LA0JNW5 1464 aa24.88■■□□□ 1.57
GADD45B-206ENST00000592937 ZCCHC11Q5TAX3 1644 aaKnown RBP24.86■■□□□ 1.57
GADD45B-206ENST00000592937 RRBP1Q9P2E9 1410 aaKnown RBP24.85■■□□□ 1.57
GADD45B-206ENST00000592937 RIMBP3CA6NJZ7 1639 aa24.83■■□□□ 1.57
GADD45B-206ENST00000592937 RIMBP3BA6NNM3 1639 aa24.83■■□□□ 1.57
GADD45B-206ENST00000592937 RIMBP3Q9UFD9 1639 aa24.83■■□□□ 1.57
GADD45B-206ENST00000592937 TROQ12816 1431 aaPredicted RBP24.83■■□□□ 1.57
GADD45B-206ENST00000592937 KIF14Q15058 1648 aa24.83■■□□□ 1.57
GADD45B-206ENST00000592937 CDK11AQ9UQ88 783 aaPredicted RBP24.83■■□□□ 1.56
GADD45B-206ENST00000592937 KDM5BQ9UGL1 1544 aa24.8■■□□□ 1.56
GADD45B-206ENST00000592937 CCNB3Q8WWL7 1395 aa24.78■■□□□ 1.56
GADD45B-206ENST00000592937 PLEKHD1A6NEE1 506 aa24.75■■□□□ 1.55
GADD45B-206ENST00000592937 MYOM3Q5VTT5 1437 aa24.75■■□□□ 1.55
GADD45B-206ENST00000592937 FGD6Q6ZV73 1430 aa24.74■■□□□ 1.55
GADD45B-206ENST00000592937 PTPN23Q9H3S7 1636 aa24.68■■□□□ 1.54
GADD45B-206ENST00000592937 CDC42BPAQ5VT25 1732 aa24.67■■□□□ 1.54
GADD45B-206ENST00000592937 ABCC10Q5T3U5 1492 aa24.67■■□□□ 1.54
GADD45B-206ENST00000592937 ITSN2Q9NZM3 1697 aa24.66■■□□□ 1.54
GADD45B-206ENST00000592937 FAM50AQ14320 339 aaKnown RBP24.65■■□□□ 1.54
GADD45B-206ENST00000592937 CYB5RLQ6IPT4 315 aa24.62■■□□□ 1.53
GADD45B-206ENST00000592937 TTC37Q6PGP7 1564 aa24.62■■□□□ 1.53
GADD45B-206ENST00000592937 GPATCH8Q9UKJ3 1502 aaKnown RBP24.62■■□□□ 1.53
GADD45B-206ENST00000592937 CCER1Q8TC90 406 aaPredicted RBP24.61■■□□□ 1.53
GADD45B-206ENST00000592937 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.6■■□□□ 1.53
GADD45B-206ENST00000592937 MIA2Q96PC5 1412 aa24.6■■□□□ 1.53
GADD45B-206ENST00000592937 ITGAEP38570 1179 aa24.59■■□□□ 1.53
GADD45B-206ENST00000592937 TCOF1Q13428 1488 aaKnown RBP24.58■■□□□ 1.53
GADD45B-206ENST00000592937 WDR7Q9Y4E6 1490 aa24.58■■□□□ 1.53
GADD45B-206ENST00000592937 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.58■■□□□ 1.53
GADD45B-206ENST00000592937 KCNH8Q96L42 1107 aa24.57■■□□□ 1.52
GADD45B-206ENST00000592937 CDC42BPBQ9Y5S2 1711 aa24.57■■□□□ 1.52
GADD45B-206ENST00000592937 ASXL2Q76L83 1435 aa24.56■■□□□ 1.52
GADD45B-206ENST00000592937 PREX2Q70Z35 1606 aa24.56■■□□□ 1.52
GADD45B-206ENST00000592937 MYO5CQ9NQX4 1742 aa24.54■■□□□ 1.52
GADD45B-206ENST00000592937 NPM1P06748 294 aaKnown RBP eCLIP24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms