RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 SHROOM2Q13796 1616 aa16.51■□□□□ 0.23
TPM4-216ENST00000592822 RIMBP3Q9UFD9 1639 aa16.51■□□□□ 0.23
TPM4-216ENST00000592822 ARHGEF11O15085 1522 aa16.5■□□□□ 0.23
TPM4-216ENST00000592822 KIAA0586Q9BVV6 1533 aa16.5■□□□□ 0.23
TPM4-216ENST00000592822 KIF21BO75037 1637 aa16.47■□□□□ 0.23
TPM4-216ENST00000592822 JPH4Q96JJ6 628 aa16.46■□□□□ 0.23
TPM4-216ENST00000592822 ERCC6L2Q5T890 1561 aa16.45■□□□□ 0.22
TPM4-216ENST00000592822 CTTNBP2Q8WZ74 1663 aa16.45■□□□□ 0.22
TPM4-216ENST00000592822 IQGAP2Q13576 1575 aa16.44■□□□□ 0.22
TPM4-216ENST00000592822 PRG4Q92954 1404 aaPredicted RBP16.42■□□□□ 0.22
TPM4-216ENST00000592822 ARAP1Q96P48 1450 aa16.4■□□□□ 0.22
TPM4-216ENST00000592822 GOLGA3Q08378 1498 aa16.37■□□□□ 0.21
TPM4-216ENST00000592822 UGGT2Q9NYU1 1516 aa16.37■□□□□ 0.21
TPM4-216ENST00000592822 EHMT2Q96KQ7 1210 aa16.36■□□□□ 0.21
TPM4-216ENST00000592822 CYB5RLQ6IPT4 315 aa16.34■□□□□ 0.21
TPM4-216ENST00000592822 DISP1Q96F81 1524 aa16.33■□□□□ 0.2
TPM4-216ENST00000592822 CARMIL2Q6F5E8 1435 aa16.31■□□□□ 0.2
TPM4-216ENST00000592822 UBTFP17480 764 aaKnown RBP16.31■□□□□ 0.2
TPM4-216ENST00000592822 KIAA0556O60303 1618 aa16.29■□□□□ 0.2
TPM4-216ENST00000592822 TNIKQ9UKE5 1360 aa16.26■□□□□ 0.19
TPM4-216ENST00000592822 SAMD9Q5K651 1589 aa16.25■□□□□ 0.19
TPM4-216ENST00000592822 PTPRGP23470 1445 aa16.23■□□□□ 0.19
TPM4-216ENST00000592822 RANGAP1P46060 587 aaPredicted RBP16.23■□□□□ 0.19
TPM4-216ENST00000592822 TTBK1Q5TCY1 1321 aaPredicted RBP16.21■□□□□ 0.19
TPM4-216ENST00000592822 P3H3Q8IVL6 736 aa16.2■□□□□ 0.18
TPM4-216ENST00000592822 EFCAB5A4FU69 1503 aa16.19■□□□□ 0.18
TPM4-216ENST00000592822 LOC105371045A0A1W2PR82 267 aa16.18■□□□□ 0.18
TPM4-216ENST00000592822 ADCY10Q96PN6 1610 aa16.16■□□□□ 0.18
TPM4-216ENST00000592822 ARHGAP35Q9NRY4 1499 aa16.15■□□□□ 0.18
TPM4-216ENST00000592822 FHOD3Q2V2M9 1422 aa16.14■□□□□ 0.17
TPM4-216ENST00000592822 UACAQ9BZF9 1416 aa16.13■□□□□ 0.17
TPM4-216ENST00000592822 PLB1Q6P1J6 1458 aa16.12■□□□□ 0.17
TPM4-216ENST00000592822 UHRF1BP1LA0JNW5 1464 aa16.11■□□□□ 0.17
TPM4-216ENST00000592822 ABCC2Q92887 1545 aa16.11■□□□□ 0.17
TPM4-216ENST00000592822 ABCA8O94911 1581 aa16.11■□□□□ 0.17
TPM4-216ENST00000592822 CLIP1P30622 1438 aa16.09■□□□□ 0.17
TPM4-216ENST00000592822 CEP162Q5TB80 1403 aa16.06■□□□□ 0.16
TPM4-216ENST00000592822 RAPGEF6Q8TEU7 1601 aa16.05■□□□□ 0.16
TPM4-216ENST00000592822 KDM5BQ9UGL1 1544 aa16.04■□□□□ 0.16
TPM4-216ENST00000592822 NPM1P06748 294 aaKnown RBP eCLIP16.04■□□□□ 0.16
TPM4-216ENST00000592822 ZCCHC11Q5TAX3 1644 aaKnown RBP16.02■□□□□ 0.16
TPM4-216ENST00000592822 FMN1Q68DA7 1419 aa16.02■□□□□ 0.15
TPM4-216ENST00000592822 MAPKBP1O60336 1514 aa16.01■□□□□ 0.15
TPM4-216ENST00000592822 NUP153P49790 1475 aaKnown RBP16■□□□□ 0.15
TPM4-216ENST00000592822 ATP10BO94823 1461 aa15.97■□□□□ 0.15
TPM4-216ENST00000592822 ARID3CA6NKF2 412 aa15.97■□□□□ 0.15
TPM4-216ENST00000592822 ASXL2Q76L83 1435 aa15.95■□□□□ 0.14
TPM4-216ENST00000592822 TRHP20396 242 aaPredicted RBP15.94■□□□□ 0.14
TPM4-216ENST00000592822 PCF11O94913 1555 aaKnown RBP15.94■□□□□ 0.14
TPM4-216ENST00000592822 HECW1Q76N89 1606 aa15.94■□□□□ 0.14
TPM4-216ENST00000592822 CASKIN1Q8WXD9 1431 aa15.93■□□□□ 0.14
TPM4-216ENST00000592822 ABCC10Q5T3U5 1492 aa15.92■□□□□ 0.14
TPM4-216ENST00000592822 KIF13AQ9H1H9 1805 aa15.92■□□□□ 0.14
TPM4-216ENST00000592822 LRRIQ1Q96JM4 1722 aa15.92■□□□□ 0.14
TPM4-216ENST00000592822 ATP1B4Q9UN42 357 aaPredicted RBP15.91■□□□□ 0.14
TPM4-216ENST00000592822 DIP2BQ9P265 1576 aa15.91■□□□□ 0.14
TPM4-216ENST00000592822 EPRSP07814 1512 aaKnown RBP15.9■□□□□ 0.14
TPM4-216ENST00000592822 CDK13Q14004 1512 aaKnown RBP15.9■□□□□ 0.14
TPM4-216ENST00000592822 FYCO1Q9BQS8 1478 aa15.9■□□□□ 0.14
TPM4-216ENST00000592822 WDR7Q9Y4E6 1490 aa15.9■□□□□ 0.14
TPM4-216ENST00000592822 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.88■□□□□ 0.13
TPM4-216ENST00000592822 HNRNPUL2Q1KMD3 747 aaKnown RBP15.88■□□□□ 0.13
TPM4-216ENST00000592822 FAM69CQ0P6D2 419 aa15.87■□□□□ 0.13
TPM4-216ENST00000592822 GLI2P10070 1586 aa15.85■□□□□ 0.13
TPM4-216ENST00000592822 VPS8Q8N3P4 1428 aa15.85■□□□□ 0.13
TPM4-216ENST00000592822 CCDC18Q5T9S5 1454 aa15.84■□□□□ 0.13
TPM4-216ENST00000592822 KCNH8Q96L42 1107 aa15.83■□□□□ 0.12
TPM4-216ENST00000592822 PLEKHD1A6NEE1 506 aa15.82■□□□□ 0.12
TPM4-216ENST00000592822 MAP3K4Q9Y6R4 1608 aa15.79■□□□□ 0.12
TPM4-216ENST00000592822 TSPOAP1O95153 1857 aa15.78■□□□□ 0.12
TPM4-216ENST00000592822 CDK11AQ9UQ88 783 aaPredicted RBP15.78■□□□□ 0.12
TPM4-216ENST00000592822 MAGI3Q5TCQ9 1506 aa15.78■□□□□ 0.12
TPM4-216ENST00000592822 ABCA9Q8IUA7 1624 aa15.77■□□□□ 0.12
TPM4-216ENST00000592822 TROQ12816 1431 aaPredicted RBP15.77■□□□□ 0.11
TPM4-216ENST00000592822 PPRC1Q5VV67 1664 aaKnown RBP15.76■□□□□ 0.11
TPM4-216ENST00000592822 CFAP43Q8NDM7 1665 aa15.76■□□□□ 0.11
TPM4-216ENST00000592822 KIF14Q15058 1648 aa15.74■□□□□ 0.11
TPM4-216ENST00000592822 CD109Q6YHK3 1445 aa15.74■□□□□ 0.11
TPM4-216ENST00000592822 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.73■□□□□ 0.11
TPM4-216ENST00000592822 TIAM1Q13009 1591 aa15.72■□□□□ 0.11
TPM4-216ENST00000592822 TTC37Q6PGP7 1564 aa15.72■□□□□ 0.11
TPM4-216ENST00000592822 MAP3K1Q13233 1512 aa15.69■□□□□ 0.1
TPM4-216ENST00000592822 MTUS2Q5JR59 1369 aa15.68■□□□□ 0.1
TPM4-216ENST00000592822 TEX14Q8IWB6 1497 aa15.67■□□□□ 0.1
TPM4-216ENST00000592822 EHBP1L1Q8N3D4 1523 aa15.67■□□□□ 0.1
TPM4-216ENST00000592822 MYO5CQ9NQX4 1742 aa15.65■□□□□ 0.1
TPM4-216ENST00000592822 LRRC9Q6ZRR7 1453 aa15.65■□□□□ 0.1
TPM4-216ENST00000592822 KANK4Q5T7N3 995 aaPredicted RBP15.64■□□□□ 0.09
TPM4-216ENST00000592822 PLCH2O75038 1416 aa15.63■□□□□ 0.09
TPM4-216ENST00000592822 APLP2Q06481 763 aa15.62■□□□□ 0.09
TPM4-216ENST00000592822 CDC42BPAQ5VT25 1732 aa15.62■□□□□ 0.09
TPM4-216ENST00000592822 ARAP3Q8WWN8 1544 aa15.61■□□□□ 0.09
TPM4-216ENST00000592822 SUPT6HQ7KZ85 1726 aaKnown RBP15.6■□□□□ 0.09
TPM4-216ENST00000592822 CDC42BPBQ9Y5S2 1711 aa15.6■□□□□ 0.09
TPM4-216ENST00000592822 FANCAO15360 1455 aa15.6■□□□□ 0.09
TPM4-216ENST00000592822 KDM6BO15054 1643 aa15.6■□□□□ 0.09
TPM4-216ENST00000592822 PREX2Q70Z35 1606 aa15.6■□□□□ 0.09
TPM4-216ENST00000592822 NEO1Q92859 1461 aa15.59■□□□□ 0.09
TPM4-216ENST00000592822 COL17A1Q9UMD9 1497 aaPredicted RBP15.59■□□□□ 0.09
TPM4-216ENST00000592822 NCOA2Q15596 1464 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms