RNA–Protein interactions for RNA: ENST00000592737.5

NCLN-208, Transcript of nicalin, humanhuman

TSL 3

Gene NCLN, Length 2,735 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-208ENST00000592737 WDR97A6NE52 1622 aa24.14■■□□□ 1.46
NCLN-208ENST00000592737 BCL11AQ9H165 835 aa24.14■■□□□ 1.45
NCLN-208ENST00000592737 RBM19Q9Y4C8 960 aaKnown RBP24.13■■□□□ 1.45
NCLN-208ENST00000592737 ANP32CO43423 234 aa24.11■■□□□ 1.45
NCLN-208ENST00000592737 CUX1P39880 1505 aa24.09■■□□□ 1.45
NCLN-208ENST00000592737 ATP1B4Q9UN42 357 aaPredicted RBP24.09■■□□□ 1.45
NCLN-208ENST00000592737 PPP1R15AO75807 674 aaPredicted RBP24.08■■□□□ 1.44
NCLN-208ENST00000592737 TIAM1Q13009 1591 aa24■■□□□ 1.43
NCLN-208ENST00000592737 CCER2I3L3R5 266 aa24■■□□□ 1.43
NCLN-208ENST00000592737 PHLDB1Q86UU1 1377 aa24■■□□□ 1.43
NCLN-208ENST00000592737 P3H3Q8IVL6 736 aa23.97■■□□□ 1.43
NCLN-208ENST00000592737 LRRC9Q6ZRR7 1453 aa23.95■■□□□ 1.42
NCLN-208ENST00000592737 TIMELESSQ9UNS1 1208 aa23.92■■□□□ 1.42
NCLN-208ENST00000592737 IRX6P78412 446 aaPredicted RBP23.88■■□□□ 1.41
NCLN-208ENST00000592737 IGF1RP08069 1367 aa23.87■■□□□ 1.41
NCLN-208ENST00000592737 TONSLQ96HA7 1378 aa23.87■■□□□ 1.41
NCLN-208ENST00000592737 MAP3K1Q13233 1512 aa23.86■■□□□ 1.41
NCLN-208ENST00000592737 HNRNPUQ00839 825 aaKnown RBP eCLIP23.84■■□□□ 1.41
NCLN-208ENST00000592737 CARMIL1Q5VZK9 1371 aa23.84■■□□□ 1.41
NCLN-208ENST00000592737 ERICH6Q7L0X2 663 aa23.83■■□□□ 1.4
NCLN-208ENST00000592737 MSH5O43196 834 aa23.82■■□□□ 1.4
NCLN-208ENST00000592737 CDK11AQ9UQ88 783 aaPredicted RBP23.8■■□□□ 1.4
NCLN-208ENST00000592737 FHAD1B1AJZ9 1412 aa23.8■■□□□ 1.4
NCLN-208ENST00000592737 CFTRP13569 1480 aa23.77■■□□□ 1.4
NCLN-208ENST00000592737 NCAPD3P42695 1498 aa23.74■■□□□ 1.39
NCLN-208ENST00000592737 PCF11O94913 1555 aaKnown RBP23.73■■□□□ 1.39
NCLN-208ENST00000592737 HMGXB3Q12766 1538 aa23.73■■□□□ 1.39
NCLN-208ENST00000592737 FHOD3Q2V2M9 1422 aa23.69■■□□□ 1.38
NCLN-208ENST00000592737 CFAP43Q8NDM7 1665 aa23.69■■□□□ 1.38
NCLN-208ENST00000592737 FANCIQ9NVI1 1328 aa23.66■■□□□ 1.38
NCLN-208ENST00000592737 CCDC18Q5T9S5 1454 aa23.64■■□□□ 1.38
NCLN-208ENST00000592737 FGD5Q6ZNL6 1462 aa23.62■■□□□ 1.37
NCLN-208ENST00000592737 FGD6Q6ZV73 1430 aa23.58■■□□□ 1.36
NCLN-208ENST00000592737 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.57■■□□□ 1.36
NCLN-208ENST00000592737 UACAQ9BZF9 1416 aa23.57■■□□□ 1.36
NCLN-208ENST00000592737 FYCO1Q9BQS8 1478 aa23.56■■□□□ 1.36
NCLN-208ENST00000592737 MTUS2Q5JR59 1369 aa23.55■■□□□ 1.36
NCLN-208ENST00000592737 HSPA5P11021 654 aaKnown RBP23.55■■□□□ 1.36
NCLN-208ENST00000592737 PPP4R2Q9NY27 417 aa23.54■■□□□ 1.36
NCLN-208ENST00000592737 CASKIN1Q8WXD9 1431 aa23.53■■□□□ 1.36
NCLN-208ENST00000592737 FAM9BQ8IZU0 186 aa23.53■■□□□ 1.36
NCLN-208ENST00000592737 WASHC2AQ641Q2 1341 aa23.52■■□□□ 1.36
NCLN-208ENST00000592737 PTPRKQ15262 1439 aa23.51■■□□□ 1.35
NCLN-208ENST00000592737 HFM1A2PYH4 1435 aa23.5■■□□□ 1.35
NCLN-208ENST00000592737 CCDC184Q52MB2 194 aa23.49■■□□□ 1.35
NCLN-208ENST00000592737 B4GALNT3Q6L9W6 998 aa23.49■■□□□ 1.35
NCLN-208ENST00000592737 PTPN23Q9H3S7 1636 aa23.48■■□□□ 1.35
NCLN-208ENST00000592737 PRDM2Q13029 1718 aa23.47■■□□□ 1.35
NCLN-208ENST00000592737 CADPSQ9ULU8 1353 aa23.47■■□□□ 1.35
NCLN-208ENST00000592737 RRP7BPQ9NSQ0 103 aa23.46■■□□□ 1.35
NCLN-208ENST00000592737 EIF4G2P78344 907 aaKnown RBP eCLIP23.46■■□□□ 1.35
NCLN-208ENST00000592737 CHIC2Q9UKJ5 165 aa23.46■■□□□ 1.35
NCLN-208ENST00000592737 ERICH6BQ5W0A0 696 aa23.46■■□□□ 1.35
NCLN-208ENST00000592737 NAIPQ13075 1403 aa23.44■■□□□ 1.34
NCLN-208ENST00000592737 AQRO60306 1485 aaKnown RBP eCLIP23.44■■□□□ 1.343e-7■■■■□ 25.7
NCLN-208ENST00000592737 MRS2Q9HD23 443 aa23.43■■□□□ 1.34
NCLN-208ENST00000592737 EFCAB5A4FU69 1503 aa23.42■■□□□ 1.34
NCLN-208ENST00000592737 FMN1Q68DA7 1419 aa23.42■■□□□ 1.34
NCLN-208ENST00000592737 RAD54L2Q9Y4B4 1467 aa23.39■■□□□ 1.34
NCLN-208ENST00000592737 KDM5BQ9UGL1 1544 aa23.37■■□□□ 1.33
NCLN-208ENST00000592737 CNTLNQ9NXG0 1405 aa23.37■■□□□ 1.33
NCLN-208ENST00000592737 NCOA2Q15596 1464 aa23.35■■□□□ 1.33
NCLN-208ENST00000592737 CNGB1Q14028 1251 aaPredicted RBP23.35■■□□□ 1.33
NCLN-208ENST00000592737 PRKRIP1Q9H875 184 aaPredicted RBP23.35■■□□□ 1.33
NCLN-208ENST00000592737 MYOM3Q5VTT5 1437 aa23.35■■□□□ 1.33
NCLN-208ENST00000592737 DEKP35659 375 aaKnown RBP23.35■■□□□ 1.33
NCLN-208ENST00000592737 MYT1LQ9UL68 1186 aa23.33■■□□□ 1.33
NCLN-208ENST00000592737 NBR1Q14596 966 aa23.32■■□□□ 1.32
NCLN-208ENST00000592737 C11orf95C9JLR9 678 aaPredicted RBP23.32■■□□□ 1.32
NCLN-208ENST00000592737 FOXD1Q16676 465 aa23.31■■□□□ 1.32
NCLN-208ENST00000592737 SNAPC4Q5SXM2 1469 aa23.3■■□□□ 1.32
NCLN-208ENST00000592737 ZBED9Q6R2W3 1325 aa23.3■■□□□ 1.32
NCLN-208ENST00000592737 L3MBTL2Q969R5 705 aa23.3■■□□□ 1.32
NCLN-208ENST00000592737 CTTNBP2Q8WZ74 1663 aa23.28■■□□□ 1.32
NCLN-208ENST00000592737 NOP58Q9Y2X3 529 aaKnown RBP23.28■■□□□ 1.32
NCLN-208ENST00000592737 FANCD2Q9BXW9 1451 aa23.28■■□□□ 1.32
NCLN-208ENST00000592737 CCDC7Q96M83 1385 aa23.27■■□□□ 1.32
NCLN-208ENST00000592737 MPHOSPH9Q99550 1183 aa23.25■■□□□ 1.31
NCLN-208ENST00000592737 SUPT6HQ7KZ85 1726 aaKnown RBP23.24■■□□□ 1.31
NCLN-208ENST00000592737 ABCA10Q8WWZ4 1543 aa23.23■■□□□ 1.31
NCLN-208ENST00000592737 POLR3GLQ9BT43 218 aa23.22■■□□□ 1.31
NCLN-208ENST00000592737 POLA1P09884 1462 aaPredicted RBP23.22■■□□□ 1.31
NCLN-208ENST00000592737 PAK3O75914 559 aaPredicted RBP23.21■■□□□ 1.31
NCLN-208ENST00000592737 CUL7Q14999 1698 aa23.2■■□□□ 1.31
NCLN-208ENST00000592737 SENP3-EIF4A1A0A087X0R7 540 aa23.2■■□□□ 1.3
NCLN-208ENST00000592737 CC2D2AQ9P2K1 1620 aa23.2■■□□□ 1.3
NCLN-208ENST00000592737 NCOA1Q15788 1441 aa23.2■■□□□ 1.3
NCLN-208ENST00000592737 LRRIQ1Q96JM4 1722 aa23.19■■□□□ 1.3
NCLN-208ENST00000592737 CCDC136Q96JN2 1154 aa23.18■■□□□ 1.3
NCLN-208ENST00000592737 DENND4BO75064 1496 aaPredicted RBP23.17■■□□□ 1.3
NCLN-208ENST00000592737 EHBP1L1Q8N3D4 1523 aa23.17■■□□□ 1.3
NCLN-208ENST00000592737 ARID3CA6NKF2 412 aa23.17■■□□□ 1.3
NCLN-208ENST00000592737 DNMBPQ6XZF7 1577 aa23.17■■□□□ 1.3
NCLN-208ENST00000592737 NBPF8Q3BBV2 869 aa23.16■■□□□ 1.3
NCLN-208ENST00000592737 KIF7Q2M1P5 1343 aa23.16■■□□□ 1.3
NCLN-208ENST00000592737 GRIN2BQ13224 1484 aa23.15■■□□□ 1.3
NCLN-208ENST00000592737 TOPBP1Q92547 1522 aa23.15■■□□□ 1.3
NCLN-208ENST00000592737 AKNAQ7Z591 1439 aa23.15■■□□□ 1.3
NCLN-208ENST00000592737 HECW1Q76N89 1606 aa23.14■■□□□ 1.3
NCLN-208ENST00000592737 ANP32AP39687 249 aaKnown RBP23.14■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms