RNA–Protein interactions for RNA: ENST00000592381.1

LINC02001-201, Transcript of long intergenic non-protein coding RNA 2001, humanhuman

TSL 2

Gene LINC02001, Length 1,298 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02001-201ENST00000592381 TRIM41Q8WV44 630 aa25.55■■□□□ 1.68
LINC02001-201ENST00000592381 PBRM1Q86U86 1689 aa25.54■■□□□ 1.68
LINC02001-201ENST00000592381 MAGI1Q96QZ7 1491 aaPredicted RBP25.53■■□□□ 1.68
LINC02001-201ENST00000592381 SNAPC4Q5SXM2 1469 aa25.53■■□□□ 1.68
LINC02001-201ENST00000592381 SLC4A1APQ9BWU0 796 aaKnown RBP25.52■■□□□ 1.68
LINC02001-201ENST00000592381 KIF27Q86VH2 1401 aa25.49■■□□□ 1.67
LINC02001-201ENST00000592381 ERICH3Q5RHP9 1530 aa25.48■■□□□ 1.67
LINC02001-201ENST00000592381 DSG3P32926 999 aa25.48■■□□□ 1.67
LINC02001-201ENST00000592381 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.46■■□□□ 1.67
LINC02001-201ENST00000592381 HNRNPUL2Q1KMD3 747 aaKnown RBP25.46■■□□□ 1.67
LINC02001-201ENST00000592381 SYNJ2O15056 1496 aa25.43■■□□□ 1.66
LINC02001-201ENST00000592381 OSCARQ8IYS5 282 aa25.42■■□□□ 1.66
LINC02001-201ENST00000592381 DNAJC5Q9H3Z4 198 aa25.42■■□□□ 1.66
LINC02001-201ENST00000592381 APLP2Q06481 763 aa25.39■■□□□ 1.66
LINC02001-201ENST00000592381 CHD1O14646 1710 aa25.39■■□□□ 1.65
LINC02001-201ENST00000592381 ADAMTS12P58397 1594 aa25.38■■□□□ 1.65
LINC02001-201ENST00000592381 IGF1RP08069 1367 aa25.37■■□□□ 1.65
LINC02001-201ENST00000592381 CHMP7Q8WUX9 453 aaPredicted RBP25.37■■□□□ 1.65
LINC02001-201ENST00000592381 FHAD1B1AJZ9 1412 aa25.37■■□□□ 1.65
LINC02001-201ENST00000592381 FBLN2P98095 1184 aa25.36■■□□□ 1.65
LINC02001-201ENST00000592381 SAMD1Q6SPF0 538 aaPredicted RBP25.34■■□□□ 1.65
LINC02001-201ENST00000592381 RUSC2Q8N2Y8 1516 aa25.3■■□□□ 1.64
LINC02001-201ENST00000592381 GRIN2AQ12879 1464 aa25.28■■□□□ 1.64
LINC02001-201ENST00000592381 CUL7Q14999 1698 aa25.27■■□□□ 1.64
LINC02001-201ENST00000592381 MYCNP04198 464 aaPredicted RBP25.27■■□□□ 1.64
LINC02001-201ENST00000592381 TRHP20396 242 aaPredicted RBP25.23■■□□□ 1.63
LINC02001-201ENST00000592381 ZNF219Q9P2Y4 722 aaPredicted RBP25.23■■□□□ 1.63
LINC02001-201ENST00000592381 CARMIL1Q5VZK9 1371 aa25.2■■□□□ 1.63
LINC02001-201ENST00000592381 NUP160Q12769 1436 aa25.19■■□□□ 1.62
LINC02001-201ENST00000592381 CLASP1Q7Z460 1538 aa25.17■■□□□ 1.62
LINC02001-201ENST00000592381 EEA1Q15075 1411 aa25.17■■□□□ 1.62
LINC02001-201ENST00000592381 CEP170Q5SW79 1584 aa25.14■■□□□ 1.61
LINC02001-201ENST00000592381 FOXD4L1Q9NU39 408 aa25.13■■□□□ 1.61
LINC02001-201ENST00000592381 RAPGEF2Q9Y4G8 1499 aa25.09■■□□□ 1.61
LINC02001-201ENST00000592381 CSRNP3Q8WYN3 585 aa25.08■■□□□ 1.61
LINC02001-201ENST00000592381 PRXQ9BXM0 1461 aa25.08■■□□□ 1.6
LINC02001-201ENST00000592381 ABCB7O75027 752 aa25.02■■□□□ 1.6
LINC02001-201ENST00000592381 ARHGEF11O15085 1522 aa25■■□□□ 1.59
LINC02001-201ENST00000592381 KIAA0586Q9BVV6 1533 aa24.99■■□□□ 1.59
LINC02001-201ENST00000592381 FAM9AQ8IZU1 332 aaPredicted RBP24.96■■□□□ 1.59
LINC02001-201ENST00000592381 RIMBP3CA6NJZ7 1639 aa24.96■■□□□ 1.59
LINC02001-201ENST00000592381 RIMBP3BA6NNM3 1639 aa24.96■■□□□ 1.59
LINC02001-201ENST00000592381 SHROOM2Q13796 1616 aa24.96■■□□□ 1.59
LINC02001-201ENST00000592381 RIMBP3Q9UFD9 1639 aa24.96■■□□□ 1.59
LINC02001-201ENST00000592381 JPH4Q96JJ6 628 aa24.91■■□□□ 1.58
LINC02001-201ENST00000592381 ZBTB22O15209 634 aa24.9■■□□□ 1.58
LINC02001-201ENST00000592381 KIF21BO75037 1637 aa24.86■■□□□ 1.57
LINC02001-201ENST00000592381 IQGAP2Q13576 1575 aa24.85■■□□□ 1.57
LINC02001-201ENST00000592381 PRG4Q92954 1404 aaPredicted RBP24.83■■□□□ 1.57
LINC02001-201ENST00000592381 ARAP1Q96P48 1450 aa24.82■■□□□ 1.56
LINC02001-201ENST00000592381 ERCC6L2Q5T890 1561 aa24.81■■□□□ 1.56
LINC02001-201ENST00000592381 CTTNBP2Q8WZ74 1663 aa24.8■■□□□ 1.56
LINC02001-201ENST00000592381 UGGT2Q9NYU1 1516 aa24.76■■□□□ 1.55
LINC02001-201ENST00000592381 GOLGA3Q08378 1498 aa24.73■■□□□ 1.55
LINC02001-201ENST00000592381 CYB5RLQ6IPT4 315 aa24.72■■□□□ 1.55
LINC02001-201ENST00000592381 ATF5Q9Y2D1 282 aaPredicted RBP24.72■■□□□ 1.55
LINC02001-201ENST00000592381 CARMIL2Q6F5E8 1435 aa24.69■■□□□ 1.54
LINC02001-201ENST00000592381 DISP1Q96F81 1524 aa24.68■■□□□ 1.54
LINC02001-201ENST00000592381 POLA2Q14181 598 aa24.66■■□□□ 1.54
LINC02001-201ENST00000592381 KIAA0556O60303 1618 aa24.61■■□□□ 1.53
LINC02001-201ENST00000592381 TNIKQ9UKE5 1360 aa24.6■■□□□ 1.53
LINC02001-201ENST00000592381 UBTFP17480 764 aaKnown RBP24.6■■□□□ 1.53
LINC02001-201ENST00000592381 EHMT2Q96KQ7 1210 aa24.57■■□□□ 1.52
LINC02001-201ENST00000592381 PTPRGP23470 1445 aa24.56■■□□□ 1.52
LINC02001-201ENST00000592381 SAMD9Q5K651 1589 aa24.54■■□□□ 1.52
LINC02001-201ENST00000592381 EFCAB5A4FU69 1503 aa24.47■■□□□ 1.51
LINC02001-201ENST00000592381 ADCY10Q96PN6 1610 aa24.43■■□□□ 1.5
LINC02001-201ENST00000592381 TTBK1Q5TCY1 1321 aaPredicted RBP24.42■■□□□ 1.5
LINC02001-201ENST00000592381 RANGAP1P46060 587 aaPredicted RBP24.42■■□□□ 1.5
LINC02001-201ENST00000592381 UHRF1BP1LA0JNW5 1464 aa24.42■■□□□ 1.5
LINC02001-201ENST00000592381 UACAQ9BZF9 1416 aa24.42■■□□□ 1.5
LINC02001-201ENST00000592381 P3H3Q8IVL6 736 aa24.41■■□□□ 1.5
LINC02001-201ENST00000592381 ATXN8OSP0DMR3 200 aa24.39■■□□□ 1.49
LINC02001-201ENST00000592381 ABCC2Q92887 1545 aa24.37■■□□□ 1.49
LINC02001-201ENST00000592381 ARHGAP35Q9NRY4 1499 aa24.37■■□□□ 1.49
LINC02001-201ENST00000592381 FHOD3Q2V2M9 1422 aa24.36■■□□□ 1.49
LINC02001-201ENST00000592381 PLB1Q6P1J6 1458 aa24.35■■□□□ 1.49
LINC02001-201ENST00000592381 ABCA8O94911 1581 aa24.34■■□□□ 1.49
LINC02001-201ENST00000592381 LOC105371045A0A1W2PR82 267 aa24.32■■□□□ 1.48
LINC02001-201ENST00000592381 NPM1P06748 294 aaKnown RBP eCLIP24.31■■□□□ 1.48
LINC02001-201ENST00000592381 KDM5BQ9UGL1 1544 aa24.29■■□□□ 1.48
LINC02001-201ENST00000592381 CLIP1P30622 1438 aa24.27■■□□□ 1.48
LINC02001-201ENST00000592381 MAPKBP1O60336 1514 aa24.27■■□□□ 1.48
LINC02001-201ENST00000592381 FMN1Q68DA7 1419 aa24.25■■□□□ 1.47
LINC02001-201ENST00000592381 RBM42Q9BTD8 480 aaKnown RBP24.24■■□□□ 1.47
LINC02001-201ENST00000592381 RAPGEF6Q8TEU7 1601 aa24.24■■□□□ 1.47
LINC02001-201ENST00000592381 CEP162Q5TB80 1403 aa24.22■■□□□ 1.47
LINC02001-201ENST00000592381 ZCCHC11Q5TAX3 1644 aaKnown RBP24.19■■□□□ 1.46
LINC02001-201ENST00000592381 NUP153P49790 1475 aaKnown RBP24.18■■□□□ 1.46
LINC02001-201ENST00000592381 ZBTB12Q9Y330 459 aaPredicted RBP24.16■■□□□ 1.46
LINC02001-201ENST00000592381 ATP10BO94823 1461 aa24.15■■□□□ 1.46
LINC02001-201ENST00000592381 ASXL2Q76L83 1435 aa24.15■■□□□ 1.46
LINC02001-201ENST00000592381 ABCC10Q5T3U5 1492 aa24.12■■□□□ 1.45
LINC02001-201ENST00000592381 HECW1Q76N89 1606 aa24.08■■□□□ 1.45
LINC02001-201ENST00000592381 CASKIN1Q8WXD9 1431 aa24.08■■□□□ 1.44
LINC02001-201ENST00000592381 DIP2BQ9P265 1576 aa24.07■■□□□ 1.44
LINC02001-201ENST00000592381 WDR7Q9Y4E6 1490 aa24.07■■□□□ 1.44
LINC02001-201ENST00000592381 ARID3CA6NKF2 412 aa24.05■■□□□ 1.44
LINC02001-201ENST00000592381 PCF11O94913 1555 aaKnown RBP24.03■■□□□ 1.44
LINC02001-201ENST00000592381 KIF13AQ9H1H9 1805 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms