RNA–Protein interactions for RNA: ENST00000592268.5

RAD23A-209, Transcript of RAD23 homolog A, nucleotide excision repair protein, humanhuman

TSL 5 BASIC

Gene RAD23A, Length 1,526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23A-209ENST00000592268 PBRM1Q86U86 1689 aa22.8■■□□□ 1.24
RAD23A-209ENST00000592268 GAPVD1Q14C86 1478 aa22.77■■□□□ 1.24
RAD23A-209ENST00000592268 IFT140Q96RY7 1462 aa22.77■■□□□ 1.24
RAD23A-209ENST00000592268 CARMIL1Q5VZK9 1371 aa22.77■■□□□ 1.24
RAD23A-209ENST00000592268 CLIP1P30622 1438 aa22.73■■□□□ 1.23
RAD23A-209ENST00000592268 CTTNBP2Q8WZ74 1663 aa22.69■■□□□ 1.22
RAD23A-209ENST00000592268 NCBP3Q53F19 620 aaKnown RBP22.68■■□□□ 1.22
RAD23A-209ENST00000592268 TDRD9Q8NDG6 1382 aaKnown RBP22.68■■□□□ 1.22
RAD23A-209ENST00000592268 ADAMTS12P58397 1594 aa22.64■■□□□ 1.21
RAD23A-209ENST00000592268 EIF4G3O43432 1585 aaKnown RBP22.63■■□□□ 1.21
RAD23A-209ENST00000592268 GRIN2BQ13224 1484 aa22.6■■□□□ 1.21
RAD23A-209ENST00000592268 VPS8Q8N3P4 1428 aa22.59■■□□□ 1.21
RAD23A-209ENST00000592268 ZNF608Q9ULD9 1512 aaPredicted RBP22.58■■□□□ 1.2
RAD23A-209ENST00000592268 ARAP1Q96P48 1450 aa22.57■■□□□ 1.2
RAD23A-209ENST00000592268 AQRO60306 1485 aaKnown RBP eCLIP22.56■■□□□ 1.27e-7■■■■■ 32.9
RAD23A-209ENST00000592268 FHAD1B1AJZ9 1412 aa22.54■■□□□ 1.2
RAD23A-209ENST00000592268 ARHGAP35Q9NRY4 1499 aa22.53■■□□□ 1.2
RAD23A-209ENST00000592268 EFCAB5A4FU69 1503 aa22.49■■□□□ 1.19
RAD23A-209ENST00000592268 RNF39Q9H2S5 420 aa22.48■■□□□ 1.19
RAD23A-209ENST00000592268 CACNB1Q02641 598 aaPredicted RBP22.47■■□□□ 1.19
RAD23A-209ENST00000592268 NPM3O75607 178 aaKnown RBP22.45■■□□□ 1.18
RAD23A-209ENST00000592268 TRIM26Q12899 539 aaPredicted RBP22.45■■□□□ 1.18
RAD23A-209ENST00000592268 MAGI1Q96QZ7 1491 aaPredicted RBP22.45■■□□□ 1.18
RAD23A-209ENST00000592268 SNAPC4Q5SXM2 1469 aa22.43■■□□□ 1.18
RAD23A-209ENST00000592268 SAMD9Q5K651 1589 aa22.42■■□□□ 1.18
RAD23A-209ENST00000592268 DNAJC5Q9H3Z4 198 aa22.41■■□□□ 1.18
RAD23A-209ENST00000592268 PCGF6Q9BYE7 350 aa22.36■■□□□ 1.17
RAD23A-209ENST00000592268 IQGAP2Q13576 1575 aa22.36■■□□□ 1.17
RAD23A-209ENST00000592268 GRIN2AQ12879 1464 aa22.35■■□□□ 1.17
RAD23A-209ENST00000592268 RANGAP1P46060 587 aaPredicted RBP22.34■■□□□ 1.17
RAD23A-209ENST00000592268 SYNJ2O15056 1496 aa22.32■■□□□ 1.16
RAD23A-209ENST00000592268 MAP3K1Q13233 1512 aa22.27■■□□□ 1.16
RAD23A-209ENST00000592268 PCF11O94913 1555 aaKnown RBP22.27■■□□□ 1.16
RAD23A-209ENST00000592268 UGGT2Q9NYU1 1516 aa22.26■■□□□ 1.15
RAD23A-209ENST00000592268 CFAP43Q8NDM7 1665 aa22.26■■□□□ 1.15
RAD23A-209ENST00000592268 KIAA0586Q9BVV6 1533 aa22.24■■□□□ 1.15
RAD23A-209ENST00000592268 FHOD3Q2V2M9 1422 aa22.23■■□□□ 1.15
RAD23A-209ENST00000592268 CEP170Q5SW79 1584 aa22.23■■□□□ 1.15
RAD23A-209ENST00000592268 FYCO1Q9BQS8 1478 aa22.22■■□□□ 1.15
RAD23A-209ENST00000592268 TIAM1Q13009 1591 aa22.21■■□□□ 1.15
RAD23A-209ENST00000592268 PPARGC1BQ86YN6 1023 aaKnown RBP22.2■■□□□ 1.14
RAD23A-209ENST00000592268 NUP160Q12769 1436 aa22.19■■□□□ 1.14
RAD23A-209ENST00000592268 FMN1Q68DA7 1419 aa22.19■■□□□ 1.14
RAD23A-209ENST00000592268 APLP2Q06481 763 aa22.18■■□□□ 1.14
RAD23A-209ENST00000592268 CASKIN1Q8WXD9 1431 aa22.17■■□□□ 1.14
RAD23A-209ENST00000592268 KIAA0556O60303 1618 aa22.15■■□□□ 1.14
RAD23A-209ENST00000592268 CHD1O14646 1710 aa22.15■■□□□ 1.14
RAD23A-209ENST00000592268 C1QBPQ07021 282 aaKnown RBP22.12■■□□□ 1.13
RAD23A-209ENST00000592268 LRRIQ1Q96JM4 1722 aa22.1■■□□□ 1.13
RAD23A-209ENST00000592268 CHMP7Q8WUX9 453 aaPredicted RBP22.1■■□□□ 1.13
RAD23A-209ENST00000592268 DISP1Q96F81 1524 aa22.09■■□□□ 1.13
RAD23A-209ENST00000592268 KCNA4P22459 653 aa22.07■■□□□ 1.12
RAD23A-209ENST00000592268 P3H3Q8IVL6 736 aa22.06■■□□□ 1.12
RAD23A-209ENST00000592268 HECW1Q76N89 1606 aa22.05■■□□□ 1.12
RAD23A-209ENST00000592268 LRRC9Q6ZRR7 1453 aa22.04■■□□□ 1.12
RAD23A-209ENST00000592268 TTBK1Q5TCY1 1321 aaPredicted RBP22■■□□□ 1.11
RAD23A-209ENST00000592268 KANK4Q5T7N3 995 aaPredicted RBP22■■□□□ 1.11
RAD23A-209ENST00000592268 CCDC18Q5T9S5 1454 aa21.98■■□□□ 1.11
RAD23A-209ENST00000592268 SHROOM2Q13796 1616 aa21.97■■□□□ 1.11
RAD23A-209ENST00000592268 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.96■■□□□ 1.112e-7■■■□□ 15.8
RAD23A-209ENST00000592268 RRBP1Q9P2E9 1410 aaKnown RBP21.95■■□□□ 1.1
RAD23A-209ENST00000592268 FBLN2P98095 1184 aa21.95■■□□□ 1.1
RAD23A-209ENST00000592268 RAPGEF6Q8TEU7 1601 aa21.94■■□□□ 1.1
RAD23A-209ENST00000592268 CARMIL2Q6F5E8 1435 aa21.92■■□□□ 1.1
RAD23A-209ENST00000592268 EHBP1L1Q8N3D4 1523 aa21.91■■□□□ 1.1
RAD23A-209ENST00000592268 EPRSP07814 1512 aaKnown RBP21.88■■□□□ 1.09
RAD23A-209ENST00000592268 CLASP1Q7Z460 1538 aa21.88■■□□□ 1.09
RAD23A-209ENST00000592268 HRCP23327 699 aa21.87■■□□□ 1.09
RAD23A-209ENST00000592268 SUPT6HQ7KZ85 1726 aaKnown RBP21.86■■□□□ 1.09
RAD23A-209ENST00000592268 JPH4Q96JJ6 628 aa21.85■■□□□ 1.09
RAD23A-209ENST00000592268 NUP153P49790 1475 aaKnown RBP21.82■■□□□ 1.08
RAD23A-209ENST00000592268 MAGI3Q5TCQ9 1506 aa21.82■■□□□ 1.08
RAD23A-209ENST00000592268 ABCA8O94911 1581 aa21.81■■□□□ 1.08
RAD23A-209ENST00000592268 ARHGEF11O15085 1522 aa21.8■■□□□ 1.08
RAD23A-209ENST00000592268 ATP1B4Q9UN42 357 aaPredicted RBP21.8■■□□□ 1.08
RAD23A-209ENST00000592268 CDK13Q14004 1512 aaKnown RBP21.8■■□□□ 1.08
RAD23A-209ENST00000592268 CCNB3Q8WWL7 1395 aa21.79■■□□□ 1.08
RAD23A-209ENST00000592268 MTUS2Q5JR59 1369 aa21.78■■□□□ 1.08
RAD23A-209ENST00000592268 PHLDB1Q86UU1 1377 aa21.78■■□□□ 1.08
RAD23A-209ENST00000592268 PRG4Q92954 1404 aaPredicted RBP21.78■■□□□ 1.08
RAD23A-209ENST00000592268 NCOA2Q15596 1464 aa21.74■■□□□ 1.07
RAD23A-209ENST00000592268 PLB1Q6P1J6 1458 aa21.74■■□□□ 1.07
RAD23A-209ENST00000592268 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.72■■□□□ 1.073e-7■■■□□ 14.6
RAD23A-209ENST00000592268 ADCY10Q96PN6 1610 aa21.71■■□□□ 1.07
RAD23A-209ENST00000592268 FGD6Q6ZV73 1430 aa21.68■■□□□ 1.06
RAD23A-209ENST00000592268 MYOM3Q5VTT5 1437 aa21.67■■□□□ 1.06
RAD23A-209ENST00000592268 ERCC6L2Q5T890 1561 aa21.66■■□□□ 1.06
RAD23A-209ENST00000592268 PTPRGP23470 1445 aa21.63■■□□□ 1.05
RAD23A-209ENST00000592268 PTPN23Q9H3S7 1636 aa21.61■■□□□ 1.05
RAD23A-209ENST00000592268 ZEB1P37275 1124 aaPredicted RBP21.61■■□□□ 1.05
RAD23A-209ENST00000592268 HNRNPUL2Q1KMD3 747 aaKnown RBP21.61■■□□□ 1.05
RAD23A-209ENST00000592268 TROQ12816 1431 aaPredicted RBP21.6■■□□□ 1.05
RAD23A-209ENST00000592268 U3KPZ7 1027 aaPredicted RBP21.6■■□□□ 1.05
RAD23A-209ENST00000592268 TCOF1Q13428 1488 aaKnown RBP21.59■■□□□ 1.05
RAD23A-209ENST00000592268 ITSN2Q9NZM3 1697 aa21.59■■□□□ 1.05
RAD23A-209ENST00000592268 ABCC2Q92887 1545 aa21.59■■□□□ 1.05
RAD23A-209ENST00000592268 MIA2Q96PC5 1412 aa21.57■■□□□ 1.04
RAD23A-209ENST00000592268 UACAQ9BZF9 1416 aa21.57■■□□□ 1.04
RAD23A-209ENST00000592268 ATP10BO94823 1461 aa21.57■■□□□ 1.04
RAD23A-209ENST00000592268 CDK11AQ9UQ88 783 aaPredicted RBP21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms