RNA–Protein interactions for RNA: ENST00000591548.5

TUBD1-211, Transcript of tubulin delta 1, humanhuman

TSL 1 (best)

Gene TUBD1, Length 1,577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-211ENST00000591548 CTTNBP2Q8WZ74 1663 aa18.07■□□□□ 0.48
TUBD1-211ENST00000591548 SYNJ2O15056 1496 aa18.06■□□□□ 0.48
TUBD1-211ENST00000591548 GRIN2AQ12879 1464 aa18.05■□□□□ 0.48
TUBD1-211ENST00000591548 ARHGAP35Q9NRY4 1499 aa18.03■□□□□ 0.48
TUBD1-211ENST00000591548 CHMP7Q8WUX9 453 aaPredicted RBP18.02■□□□□ 0.48
TUBD1-211ENST00000591548 ARAP1Q96P48 1450 aa18■□□□□ 0.47
TUBD1-211ENST00000591548 FBLN2P98095 1184 aa17.99■□□□□ 0.47
TUBD1-211ENST00000591548 VPS8Q8N3P4 1428 aa17.96■□□□□ 0.47
TUBD1-211ENST00000591548 IQGAP2Q13576 1575 aa17.95■□□□□ 0.46
TUBD1-211ENST00000591548 CEP170Q5SW79 1584 aa17.95■□□□□ 0.46
TUBD1-211ENST00000591548 KIAA0586Q9BVV6 1533 aa17.94■□□□□ 0.46
TUBD1-211ENST00000591548 EFCAB5A4FU69 1503 aa17.93■□□□□ 0.46
TUBD1-211ENST00000591548 NUP160Q12769 1436 aa17.93■□□□□ 0.46
TUBD1-211ENST00000591548 P3H3Q8IVL6 736 aa17.91■□□□□ 0.46
TUBD1-211ENST00000591548 SAMD9Q5K651 1589 aa17.9■□□□□ 0.46
TUBD1-211ENST00000591548 CHD1O14646 1710 aa17.9■□□□□ 0.46
TUBD1-211ENST00000591548 FHOD3Q2V2M9 1422 aa17.88■□□□□ 0.45
TUBD1-211ENST00000591548 UGGT2Q9NYU1 1516 aa17.87■□□□□ 0.45
TUBD1-211ENST00000591548 PPARGC1BQ86YN6 1023 aaKnown RBP17.83■□□□□ 0.45
TUBD1-211ENST00000591548 DISP1Q96F81 1524 aa17.81■□□□□ 0.44
TUBD1-211ENST00000591548 JPH4Q96JJ6 628 aa17.79■□□□□ 0.44
TUBD1-211ENST00000591548 KIAA0556O60303 1618 aa17.77■□□□□ 0.44
TUBD1-211ENST00000591548 FMN1Q68DA7 1419 aa17.77■□□□□ 0.43
TUBD1-211ENST00000591548 PCF11O94913 1555 aaKnown RBP17.75■□□□□ 0.43
TUBD1-211ENST00000591548 APLP2Q06481 763 aa17.74■□□□□ 0.43
TUBD1-211ENST00000591548 CASKIN1Q8WXD9 1431 aa17.73■□□□□ 0.43
TUBD1-211ENST00000591548 FYCO1Q9BQS8 1478 aa17.72■□□□□ 0.43
TUBD1-211ENST00000591548 CLASP1Q7Z460 1538 aa17.71■□□□□ 0.43
TUBD1-211ENST00000591548 CARMIL2Q6F5E8 1435 aa17.7■□□□□ 0.42
TUBD1-211ENST00000591548 SHROOM2Q13796 1616 aa17.7■□□□□ 0.42
TUBD1-211ENST00000591548 TTBK1Q5TCY1 1321 aaPredicted RBP17.7■□□□□ 0.42
TUBD1-211ENST00000591548 TRIM26Q12899 539 aaPredicted RBP17.7■□□□□ 0.42
TUBD1-211ENST00000591548 PRG4Q92954 1404 aaPredicted RBP17.69■□□□□ 0.42
TUBD1-211ENST00000591548 KANK4Q5T7N3 995 aaPredicted RBP17.67■□□□□ 0.42
TUBD1-211ENST00000591548 ATP1B4Q9UN42 357 aaPredicted RBP17.67■□□□□ 0.42
TUBD1-211ENST00000591548 MAP3K1Q13233 1512 aa17.67■□□□□ 0.42
TUBD1-211ENST00000591548 PCGF6Q9BYE7 350 aa17.66■□□□□ 0.42
TUBD1-211ENST00000591548 TIAM1Q13009 1591 aa17.66■□□□□ 0.42
TUBD1-211ENST00000591548 CFAP43Q8NDM7 1665 aa17.62■□□□□ 0.41
TUBD1-211ENST00000591548 LRRIQ1Q96JM4 1722 aa17.62■□□□□ 0.41
TUBD1-211ENST00000591548 ERCC6L2Q5T890 1561 aa17.61■□□□□ 0.41
TUBD1-211ENST00000591548 OSCARQ8IYS5 282 aa17.6■□□□□ 0.41
TUBD1-211ENST00000591548 HECW1Q76N89 1606 aa17.59■□□□□ 0.41
TUBD1-211ENST00000591548 LRRC9Q6ZRR7 1453 aa17.59■□□□□ 0.41
TUBD1-211ENST00000591548 RAPGEF6Q8TEU7 1601 aa17.58■□□□□ 0.4
TUBD1-211ENST00000591548 PLB1Q6P1J6 1458 aa17.57■□□□□ 0.4
TUBD1-211ENST00000591548 PTPRGP23470 1445 aa17.56■□□□□ 0.4
TUBD1-211ENST00000591548 NUP153P49790 1475 aaKnown RBP17.56■□□□□ 0.4
TUBD1-211ENST00000591548 EPRSP07814 1512 aaKnown RBP17.56■□□□□ 0.4
TUBD1-211ENST00000591548 CCDC18Q5T9S5 1454 aa17.55■□□□□ 0.4
TUBD1-211ENST00000591548 ABCA8O94911 1581 aa17.54■□□□□ 0.4
TUBD1-211ENST00000591548 CDK13Q14004 1512 aaKnown RBP17.52■□□□□ 0.4
TUBD1-211ENST00000591548 ARID3CA6NKF2 412 aa17.51■□□□□ 0.39
TUBD1-211ENST00000591548 MAGI3Q5TCQ9 1506 aa17.49■□□□□ 0.39
TUBD1-211ENST00000591548 MTUS2Q5JR59 1369 aa17.48■□□□□ 0.39
TUBD1-211ENST00000591548 UACAQ9BZF9 1416 aa17.46■□□□□ 0.38
TUBD1-211ENST00000591548 EHBP1L1Q8N3D4 1523 aa17.45■□□□□ 0.38
TUBD1-211ENST00000591548 PHLDB1Q86UU1 1377 aa17.44■□□□□ 0.38
TUBD1-211ENST00000591548 ATP10BO94823 1461 aa17.42■□□□□ 0.38
TUBD1-211ENST00000591548 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.41■□□□□ 0.38
TUBD1-211ENST00000591548 HNRNPUL2Q1KMD3 747 aaKnown RBP17.41■□□□□ 0.38
TUBD1-211ENST00000591548 RRBP1Q9P2E9 1410 aaKnown RBP17.41■□□□□ 0.38
TUBD1-211ENST00000591548 ABCC2Q92887 1545 aa17.4■□□□□ 0.38
TUBD1-211ENST00000591548 NCOA2Q15596 1464 aa17.4■□□□□ 0.38
TUBD1-211ENST00000591548 CDK11AQ9UQ88 783 aaPredicted RBP17.39■□□□□ 0.37
TUBD1-211ENST00000591548 SUPT6HQ7KZ85 1726 aaKnown RBP17.39■□□□□ 0.37
TUBD1-211ENST00000591548 ARHGEF11O15085 1522 aa17.38■□□□□ 0.37
TUBD1-211ENST00000591548 UHRF1BP1LA0JNW5 1464 aa17.38■□□□□ 0.37
TUBD1-211ENST00000591548 CCNB3Q8WWL7 1395 aa17.36■□□□□ 0.37
TUBD1-211ENST00000591548 TROQ12816 1431 aaPredicted RBP17.35■□□□□ 0.37
TUBD1-211ENST00000591548 PLEKHD1A6NEE1 506 aa17.32■□□□□ 0.36
TUBD1-211ENST00000591548 KDM5BQ9UGL1 1544 aa17.31■□□□□ 0.36
TUBD1-211ENST00000591548 MYOM3Q5VTT5 1437 aa17.31■□□□□ 0.36
TUBD1-211ENST00000591548 ADCY10Q96PN6 1610 aa17.31■□□□□ 0.36
TUBD1-211ENST00000591548 FGD6Q6ZV73 1430 aa17.3■□□□□ 0.36
TUBD1-211ENST00000591548 KIF14Q15058 1648 aa17.29■□□□□ 0.36
TUBD1-211ENST00000591548 ZCCHC11Q5TAX3 1644 aaKnown RBP17.28■□□□□ 0.36
TUBD1-211ENST00000591548 FAM50AQ14320 339 aaKnown RBP17.25■□□□□ 0.35
TUBD1-211ENST00000591548 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.25■□□□□ 0.35
TUBD1-211ENST00000591548 RIMBP3CA6NJZ7 1639 aa17.23■□□□□ 0.35
TUBD1-211ENST00000591548 RIMBP3BA6NNM3 1639 aa17.23■□□□□ 0.35
TUBD1-211ENST00000591548 RIMBP3Q9UFD9 1639 aa17.23■□□□□ 0.35
TUBD1-211ENST00000591548 ABCC10Q5T3U5 1492 aa17.23■□□□□ 0.35
TUBD1-211ENST00000591548 MIA2Q96PC5 1412 aa17.22■□□□□ 0.35
TUBD1-211ENST00000591548 PTPN23Q9H3S7 1636 aa17.21■□□□□ 0.35
TUBD1-211ENST00000591548 GPATCH8Q9UKJ3 1502 aaKnown RBP17.21■□□□□ 0.35
TUBD1-211ENST00000591548 ITGAEP38570 1179 aa17.2■□□□□ 0.34
TUBD1-211ENST00000591548 TCOF1Q13428 1488 aaKnown RBP17.2■□□□□ 0.34
TUBD1-211ENST00000591548 ITSN2Q9NZM3 1697 aa17.17■□□□□ 0.34
TUBD1-211ENST00000591548 CDC42BPAQ5VT25 1732 aa17.16■□□□□ 0.34
TUBD1-211ENST00000591548 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.16■□□□□ 0.34
TUBD1-211ENST00000591548 CYB5RLQ6IPT4 315 aa17.15■□□□□ 0.34
TUBD1-211ENST00000591548 KCNH8Q96L42 1107 aa17.15■□□□□ 0.34
TUBD1-211ENST00000591548 CFDP1Q9UEE9 299 aaPredicted RBP17.15■□□□□ 0.34
TUBD1-211ENST00000591548 ZNF644Q9H582 1327 aaPredicted RBP17.15■□□□□ 0.34
TUBD1-211ENST00000591548 WDR7Q9Y4E6 1490 aa17.14■□□□□ 0.34
TUBD1-211ENST00000591548 TTC37Q6PGP7 1564 aa17.14■□□□□ 0.33
TUBD1-211ENST00000591548 PTPRKQ15262 1439 aa17.13■□□□□ 0.33
TUBD1-211ENST00000591548 ASXL2Q76L83 1435 aa17.13■□□□□ 0.33
TUBD1-211ENST00000591548 NPM1P06748 294 aaKnown RBP eCLIP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms