RNA–Protein interactions for RNA: ENST00000591416.5

MBD1-224, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene MBD1, Length 4,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-224ENST00000591416 STAG3Q9UJ98 1225 aa21.67■■□□□ 1.06
MBD1-224ENST00000591416 ACIN1Q9UKV3 1341 aaKnown RBP21.65■■□□□ 1.06
MBD1-224ENST00000591416 VPS8Q8N3P4 1428 aa21.63■■□□□ 1.05
MBD1-224ENST00000591416 CARMIL2Q6F5E8 1435 aa21.59■■□□□ 1.05
MBD1-224ENST00000591416 RAPGEF2Q9Y4G8 1499 aa21.58■■□□□ 1.05
MBD1-224ENST00000591416 CCNB3Q8WWL7 1395 aa21.55■■□□□ 1.04
MBD1-224ENST00000591416 FMN1Q68DA7 1419 aa21.52■■□□□ 1.03
MBD1-224ENST00000591416 PLPPR3Q6T4P5 718 aa21.49■■□□□ 1.03
MBD1-224ENST00000591416 KDM2AQ9Y2K7 1162 aa21.48■■□□□ 1.03
MBD1-224ENST00000591416 RUSC2Q8N2Y8 1516 aa21.45■■□□□ 1.02
MBD1-224ENST00000591416 DDX10Q13206 875 aaKnown RBP21.43■■□□□ 1.02
MBD1-224ENST00000591416 FGD5Q6ZNL6 1462 aa21.42■■□□□ 1.02
MBD1-224ENST00000591416 KANK4Q5T7N3 995 aaPredicted RBP21.42■■□□□ 1.02
MBD1-224ENST00000591416 NEFMP07197 916 aa21.39■■□□□ 1.01
MBD1-224ENST00000591416 ARHGAP35Q9NRY4 1499 aa21.38■■□□□ 1.01
MBD1-224ENST00000591416 HMGXB3Q12766 1538 aa21.37■■□□□ 1.01
MBD1-224ENST00000591416 JPH4Q96JJ6 628 aa21.37■■□□□ 1.01
MBD1-224ENST00000591416 CFTRP13569 1480 aa21.37■■□□□ 1.01
MBD1-224ENST00000591416 FHOD3Q2V2M9 1422 aa21.36■■□□□ 1.01
MBD1-224ENST00000591416 BICRAQ9NZM4 1560 aa21.36■■□□□ 1.01
MBD1-224ENST00000591416 CC2D2AQ9P2K1 1620 aa21.35■■□□□ 1.01
MBD1-224ENST00000591416 EIF4G2P78344 907 aaKnown RBP eCLIP21.34■■□□□ 1.01
MBD1-224ENST00000591416 IGF1RP08069 1367 aa21.33■■□□□ 1
MBD1-224ENST00000591416 CLSPNQ9HAW4 1339 aa21.32■■□□□ 1
MBD1-224ENST00000591416 GAPVD1Q14C86 1478 aa21.32■■□□□ 1
MBD1-224ENST00000591416 RGL3Q3MIN7 710 aa21.31■■□□□ 1
MBD1-224ENST00000591416 RAD54L2Q9Y4B4 1467 aa21.31■■□□□ 1
MBD1-224ENST00000591416 DAXXQ9UER7 740 aaPredicted RBP21.3■■□□□ 1
MBD1-224ENST00000591416 ARID4BQ4LE39 1312 aaPredicted RBP21.26■□□□□ 0.99
MBD1-224ENST00000591416 HIRIP3Q9BW71 556 aaPredicted RBP21.24■□□□□ 0.99
MBD1-224ENST00000591416 PPP1R15AO75807 674 aaPredicted RBP21.22■□□□□ 0.99
MBD1-224ENST00000591416 EFCAB2Q5VUJ9 269 aa21.22■□□□□ 0.99
MBD1-224ENST00000591416 SIN3AQ96ST3 1273 aa21.22■□□□□ 0.99
MBD1-224ENST00000591416 SETD5Q9C0A6 1442 aa21.21■□□□□ 0.99
MBD1-224ENST00000591416 GTF3C3Q9Y5Q9 886 aa21.21■□□□□ 0.99
MBD1-224ENST00000591416 NESP48681 1621 aa21.21■□□□□ 0.99
MBD1-224ENST00000591416 TMC1Q8TDI8 760 aa21.17■□□□□ 0.98
MBD1-224ENST00000591416 CCDC18Q5T9S5 1454 aa21.15■□□□□ 0.98
MBD1-224ENST00000591416 FAM9BQ8IZU0 186 aa21.15■□□□□ 0.98
MBD1-224ENST00000591416 CANXP27824 592 aaKnown RBP21.15■□□□□ 0.98
MBD1-224ENST00000591416 HNRNPUQ00839 825 aaKnown RBP eCLIP21.14■□□□□ 0.98
MBD1-224ENST00000591416 AQRO60306 1485 aaKnown RBP eCLIP21.14■□□□□ 0.986e-7■■■□□ 18.9
MBD1-224ENST00000591416 SLC24A1O60721 1099 aa21.14■□□□□ 0.97
MBD1-224ENST00000591416 KANK1Q14678 1352 aa21.14■□□□□ 0.97
MBD1-224ENST00000591416 TIMELESSQ9UNS1 1208 aa21.13■□□□□ 0.97
MBD1-224ENST00000591416 PTPRGP23470 1445 aa21.12■□□□□ 0.97
MBD1-224ENST00000591416 CARD11Q9BXL7 1154 aa21.12■□□□□ 0.97
MBD1-224ENST00000591416 SYNJ1O43426 1573 aa21.11■□□□□ 0.97
MBD1-224ENST00000591416 TRHP20396 242 aaPredicted RBP21.11■□□□□ 0.97
MBD1-224ENST00000591416 MRS2Q9HD23 443 aa21.09■□□□□ 0.97
MBD1-224ENST00000591416 MRC2Q9UBG0 1479 aa21.09■□□□□ 0.97
MBD1-224ENST00000591416 SENP3Q9H4L4 574 aaPredicted RBP21.09■□□□□ 0.97
MBD1-224ENST00000591416 ANKRD30AQ9BXX3 1397 aa21.08■□□□□ 0.97
MBD1-224ENST00000591416 OSCARQ8IYS5 282 aa21.08■□□□□ 0.96
MBD1-224ENST00000591416 CDCA8Q53HL2 280 aa21.07■□□□□ 0.96
MBD1-224ENST00000591416 RSPH4AQ5TD94 716 aa21.07■□□□□ 0.96
MBD1-224ENST00000591416 GRIN2BQ13224 1484 aa21.07■□□□□ 0.96
MBD1-224ENST00000591416 TOPBP1Q92547 1522 aa21.06■□□□□ 0.96
MBD1-224ENST00000591416 RAB3GAP2Q9H2M9 1393 aa21.06■□□□□ 0.96
MBD1-224ENST00000591416 MIER1Q8N108 512 aa21.05■□□□□ 0.96
MBD1-224ENST00000591416 ZBTB47Q9UFB7 747 aaPredicted RBP21.04■□□□□ 0.96
MBD1-224ENST00000591416 PKD2Q13563 968 aa21.03■□□□□ 0.96
MBD1-224ENST00000591416 WDR43Q15061 677 aaKnown RBP eCLIP21.02■□□□□ 0.96
MBD1-224ENST00000591416 TOP2BQ02880 1626 aa21.02■□□□□ 0.96
MBD1-224ENST00000591416 GGT6Q6P531 493 aa21.02■□□□□ 0.95
MBD1-224ENST00000591416 CUX1P39880 1505 aa21.01■□□□□ 0.95
MBD1-224ENST00000591416 HNRNPMP52272 730 aaKnown RBP eCLIP21■□□□□ 0.95
MBD1-224ENST00000591416 DCAF11Q8TEB1 546 aa21■□□□□ 0.95
MBD1-224ENST00000591416 POLA1P09884 1462 aaPredicted RBP21■□□□□ 0.95
MBD1-224ENST00000591416 IFT140Q96RY7 1462 aa20.99■□□□□ 0.95
MBD1-224ENST00000591416 NUP155O75694 1391 aa20.99■□□□□ 0.95
MBD1-224ENST00000591416 MPHOSPH9Q99550 1183 aa20.98■□□□□ 0.95
MBD1-224ENST00000591416 ERICH3Q5RHP9 1530 aa20.98■□□□□ 0.95
MBD1-224ENST00000591416 MLECQ14165 292 aa20.97■□□□□ 0.95
MBD1-224ENST00000591416 SALL2Q9Y467 1007 aaPredicted RBP20.97■□□□□ 0.95
MBD1-224ENST00000591416 PEG3Q9GZU2 1588 aa20.97■□□□□ 0.95
MBD1-224ENST00000591416 KIF21BO75037 1637 aa20.96■□□□□ 0.95
MBD1-224ENST00000591416 UNC13AQ9UPW8 1703 aa20.96■□□□□ 0.95
MBD1-224ENST00000591416 SPAG9O60271 1321 aaKnown RBP20.95■□□□□ 0.94
MBD1-224ENST00000591416 DNMBPQ6XZF7 1577 aa20.93■□□□□ 0.94
MBD1-224ENST00000591416 FOXD1Q16676 465 aa20.92■□□□□ 0.94
MBD1-224ENST00000591416 DNAJC5BQ9UF47 199 aa20.92■□□□□ 0.94
MBD1-224ENST00000591416 LAMC3Q9Y6N6 1575 aa20.91■□□□□ 0.94
MBD1-224ENST00000591416 C14orf37Q86TY3 774 aa20.91■□□□□ 0.94
MBD1-224ENST00000591416 KNSTRNQ9Y448 316 aa20.91■□□□□ 0.94
MBD1-224ENST00000591416 PRXQ9BXM0 1461 aa20.9■□□□□ 0.94
MBD1-224ENST00000591416 KIF3BO15066 747 aa20.9■□□□□ 0.94
MBD1-224ENST00000591416 POGKQ9P215 609 aa20.89■□□□□ 0.94
MBD1-224ENST00000591416 CYB5RLQ6IPT4 315 aa20.89■□□□□ 0.93
MBD1-224ENST00000591416 HDGFP51858 240 aaKnown RBP20.87■□□□□ 0.93
MBD1-224ENST00000591416 FKBP8Q14318 412 aa20.85■□□□□ 0.93
MBD1-224ENST00000591416 CASKIN1Q8WXD9 1431 aa20.82■□□□□ 0.92
MBD1-224ENST00000591416 TMF1P82094 1093 aa20.82■□□□□ 0.92
MBD1-224ENST00000591416 CFAP53Q96M91 514 aa20.8■□□□□ 0.92
MBD1-224ENST00000591416 SCAF1Q9H7N4 1312 aaKnown RBP20.79■□□□□ 0.92
MBD1-224ENST00000591416 BCL11AQ9H165 835 aa20.79■□□□□ 0.92
MBD1-224ENST00000591416 ARAP1Q96P48 1450 aa20.78■□□□□ 0.92
MBD1-224ENST00000591416 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.78■□□□□ 0.92
MBD1-224ENST00000591416 ABCA10Q8WWZ4 1543 aa20.78■□□□□ 0.92
MBD1-224ENST00000591416 SNAPC4Q5SXM2 1469 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms