RNA–Protein interactions for RNA: ENST00000591054.5

MRPL4-209, Transcript of mitochondrial ribosomal protein L4, humanhuman

TSL 3

Gene MRPL4, Length 777 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL4-209ENST00000591054 CTTNBP2Q8WZ74 1663 aa36.66■■■■□ 3.46
MRPL4-209ENST00000591054 SHROOM2Q13796 1616 aa36.64■■■■□ 3.46
MRPL4-209ENST00000591054 GOLGA3Q08378 1498 aa36.61■■■■□ 3.45
MRPL4-209ENST00000591054 IQGAP2Q13576 1575 aa36.61■■■■□ 3.45
MRPL4-209ENST00000591054 ARHGEF11O15085 1522 aa36.51■■■■□ 3.44
MRPL4-209ENST00000591054 JPH4Q96JJ6 628 aa36.48■■■■□ 3.43
MRPL4-209ENST00000591054 RIMBP3CA6NJZ7 1639 aa36.45■■■■□ 3.43
MRPL4-209ENST00000591054 RIMBP3BA6NNM3 1639 aa36.45■■■■□ 3.43
MRPL4-209ENST00000591054 RIMBP3Q9UFD9 1639 aa36.45■■■■□ 3.43
MRPL4-209ENST00000591054 UGGT2Q9NYU1 1516 aa36.44■■■■□ 3.42
MRPL4-209ENST00000591054 PRG4Q92954 1404 aaPredicted RBP36.41■■■■□ 3.42
MRPL4-209ENST00000591054 UBTFP17480 764 aaKnown RBP36.34■■■■□ 3.41
MRPL4-209ENST00000591054 ERCC6L2Q5T890 1561 aa36.33■■■■□ 3.41
MRPL4-209ENST00000591054 CARMIL2Q6F5E8 1435 aa36.31■■■■□ 3.4
MRPL4-209ENST00000591054 DISP1Q96F81 1524 aa36.28■■■■□ 3.4
MRPL4-209ENST00000591054 EHMT2Q96KQ7 1210 aa36.27■■■■□ 3.4
MRPL4-209ENST00000591054 KIAA0556O60303 1618 aa36.25■■■■□ 3.39
MRPL4-209ENST00000591054 ARAP1Q96P48 1450 aa36.24■■■■□ 3.39
MRPL4-209ENST00000591054 TNIKQ9UKE5 1360 aa36.21■■■■□ 3.39
MRPL4-209ENST00000591054 SAMD9Q5K651 1589 aa36.2■■■■□ 3.39
MRPL4-209ENST00000591054 EFCAB5A4FU69 1503 aa36.17■■■■□ 3.38
MRPL4-209ENST00000591054 PTPRGP23470 1445 aa36.04■■■■□ 3.36
MRPL4-209ENST00000591054 CYB5RLQ6IPT4 315 aa36.02■■■■□ 3.36
MRPL4-209ENST00000591054 LOC105371045A0A1W2PR82 267 aa36.01■■■■□ 3.36
MRPL4-209ENST00000591054 RANGAP1P46060 587 aaPredicted RBP35.98■■■■□ 3.35
MRPL4-209ENST00000591054 ARHGAP35Q9NRY4 1499 aa35.97■■■■□ 3.35
MRPL4-209ENST00000591054 CLIP1P30622 1438 aa35.92■■■■□ 3.34
MRPL4-209ENST00000591054 FHOD3Q2V2M9 1422 aa35.91■■■■□ 3.34
MRPL4-209ENST00000591054 P3H3Q8IVL6 736 aa35.89■■■■□ 3.34
MRPL4-209ENST00000591054 CEP162Q5TB80 1403 aa35.89■■■■□ 3.34
MRPL4-209ENST00000591054 UACAQ9BZF9 1416 aa35.84■■■■□ 3.33
MRPL4-209ENST00000591054 UHRF1BP1LA0JNW5 1464 aa35.84■■■■□ 3.33
MRPL4-209ENST00000591054 ADCY10Q96PN6 1610 aa35.83■■■■□ 3.33
MRPL4-209ENST00000591054 TTBK1Q5TCY1 1321 aaPredicted RBP35.83■■■■□ 3.33
MRPL4-209ENST00000591054 ABCA8O94911 1581 aa35.81■■■■□ 3.32
MRPL4-209ENST00000591054 ABCC2Q92887 1545 aa35.81■■■■□ 3.32
MRPL4-209ENST00000591054 FMN1Q68DA7 1419 aa35.78■■■■□ 3.32
MRPL4-209ENST00000591054 PLB1Q6P1J6 1458 aa35.77■■■■□ 3.32
MRPL4-209ENST00000591054 RAPGEF6Q8TEU7 1601 aa35.73■■■■□ 3.31
MRPL4-209ENST00000591054 KDM5BQ9UGL1 1544 aa35.64■■■■□ 3.3
MRPL4-209ENST00000591054 NPM1P06748 294 aaKnown RBP eCLIP35.59■■■■□ 3.29
MRPL4-209ENST00000591054 HECW1Q76N89 1606 aa35.57■■■■□ 3.29
MRPL4-209ENST00000591054 NUP153P49790 1475 aaKnown RBP35.57■■■■□ 3.28
MRPL4-209ENST00000591054 ZCCHC11Q5TAX3 1644 aaKnown RBP35.57■■■■□ 3.28
MRPL4-209ENST00000591054 MAPKBP1O60336 1514 aa35.56■■■■□ 3.28
MRPL4-209ENST00000591054 CASKIN1Q8WXD9 1431 aa35.54■■■■□ 3.28
MRPL4-209ENST00000591054 PCF11O94913 1555 aaKnown RBP35.54■■■■□ 3.28
MRPL4-209ENST00000591054 FYCO1Q9BQS8 1478 aa35.52■■■■□ 3.28
MRPL4-209ENST00000591054 ATP10BO94823 1461 aa35.47■■■■□ 3.27
MRPL4-209ENST00000591054 VPS8Q8N3P4 1428 aa35.45■■■■□ 3.27
MRPL4-209ENST00000591054 EPRSP07814 1512 aaKnown RBP35.41■■■■□ 3.26
MRPL4-209ENST00000591054 CCDC18Q5T9S5 1454 aa35.39■■■■□ 3.26
MRPL4-209ENST00000591054 ASXL2Q76L83 1435 aa35.39■■■■□ 3.26
MRPL4-209ENST00000591054 LRRIQ1Q96JM4 1722 aa35.37■■■■□ 3.25
MRPL4-209ENST00000591054 CDK13Q14004 1512 aaKnown RBP35.34■■■■□ 3.25
MRPL4-209ENST00000591054 ATP1B4Q9UN42 357 aaPredicted RBP35.33■■■■□ 3.25
MRPL4-209ENST00000591054 WDR7Q9Y4E6 1490 aa35.33■■■■□ 3.25
MRPL4-209ENST00000591054 ARID3CA6NKF2 412 aa35.32■■■■□ 3.24
MRPL4-209ENST00000591054 ABCC10Q5T3U5 1492 aa35.28■■■■□ 3.24
MRPL4-209ENST00000591054 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.27■■■■□ 3.24
MRPL4-209ENST00000591054 HNRNPUL2Q1KMD3 747 aaKnown RBP35.27■■■■□ 3.24
MRPL4-209ENST00000591054 DIP2BQ9P265 1576 aa35.25■■■■□ 3.23
MRPL4-209ENST00000591054 CDK11AQ9UQ88 783 aaPredicted RBP35.21■■■■□ 3.23
MRPL4-209ENST00000591054 KIF13AQ9H1H9 1805 aa35.2■■■■□ 3.23
MRPL4-209ENST00000591054 GLI2P10070 1586 aa35.2■■■■□ 3.23
MRPL4-209ENST00000591054 PLEKHD1A6NEE1 506 aa35.19■■■■□ 3.22
MRPL4-209ENST00000591054 CFAP43Q8NDM7 1665 aa35.18■■■■□ 3.22
MRPL4-209ENST00000591054 MAP3K1Q13233 1512 aa35.15■■■■□ 3.22
MRPL4-209ENST00000591054 TIAM1Q13009 1591 aa35.13■■■■□ 3.21
MRPL4-209ENST00000591054 TROQ12816 1431 aaPredicted RBP35.12■■■■□ 3.21
MRPL4-209ENST00000591054 TRHP20396 242 aaPredicted RBP35.11■■■■□ 3.21
MRPL4-209ENST00000591054 FAM69CQ0P6D2 419 aa35.08■■■■□ 3.21
MRPL4-209ENST00000591054 MAGI3Q5TCQ9 1506 aa35.06■■■■□ 3.2
MRPL4-209ENST00000591054 ABCA9Q8IUA7 1624 aa35.05■■■■□ 3.2
MRPL4-209ENST00000591054 KIF14Q15058 1648 aa35.04■■■■□ 3.2
MRPL4-209ENST00000591054 MAP3K4Q9Y6R4 1608 aa35.04■■■■□ 3.2
MRPL4-209ENST00000591054 KCNH8Q96L42 1107 aa35.04■■■■□ 3.2
MRPL4-209ENST00000591054 EHBP1L1Q8N3D4 1523 aa35.02■■■■□ 3.2
MRPL4-209ENST00000591054 MTUS2Q5JR59 1369 aa34.99■■■■□ 3.19
MRPL4-209ENST00000591054 APLP2Q06481 763 aa34.98■■■■□ 3.19
MRPL4-209ENST00000591054 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.96■■■■□ 3.19
MRPL4-209ENST00000591054 LRRC9Q6ZRR7 1453 aa34.94■■■■□ 3.18
MRPL4-209ENST00000591054 TTC37Q6PGP7 1564 aa34.92■■■■□ 3.18
MRPL4-209ENST00000591054 CD109Q6YHK3 1445 aa34.9■■■■□ 3.18
MRPL4-209ENST00000591054 PPRC1Q5VV67 1664 aaKnown RBP34.88■■■■□ 3.17
MRPL4-209ENST00000591054 TSPOAP1O95153 1857 aa34.88■■■■□ 3.17
MRPL4-209ENST00000591054 SUPT6HQ7KZ85 1726 aaKnown RBP34.86■■■■□ 3.17
MRPL4-209ENST00000591054 TEX14Q8IWB6 1497 aa34.84■■■■□ 3.17
MRPL4-209ENST00000591054 MYO5CQ9NQX4 1742 aa34.84■■■■□ 3.17
MRPL4-209ENST00000591054 ARAP3Q8WWN8 1544 aa34.81■■■■□ 3.16
MRPL4-209ENST00000591054 KANK4Q5T7N3 995 aaPredicted RBP34.78■■■■□ 3.16
MRPL4-209ENST00000591054 PLCH2O75038 1416 aa34.76■■■■□ 3.16
MRPL4-209ENST00000591054 NCOA2Q15596 1464 aa34.76■■■■□ 3.15
MRPL4-209ENST00000591054 PREX2Q70Z35 1606 aa34.75■■■■□ 3.15
MRPL4-209ENST00000591054 CDC42BPAQ5VT25 1732 aa34.74■■■■□ 3.15
MRPL4-209ENST00000591054 CFAP74Q9C0B2 1584 aa34.74■■■■□ 3.15
MRPL4-209ENST00000591054 NEO1Q92859 1461 aa34.71■■■■□ 3.15
MRPL4-209ENST00000591054 ITSN2Q9NZM3 1697 aa34.7■■■■□ 3.15
MRPL4-209ENST00000591054 CCNB3Q8WWL7 1395 aa34.69■■■■□ 3.14
MRPL4-209ENST00000591054 CDC42BPBQ9Y5S2 1711 aa34.69■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms