RNA–Protein interactions for RNA: ENST00000590315.5

DDX39A-213, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-213ENST00000590315 IQGAP2Q13576 1575 aa21.14■□□□□ 0.97
DDX39A-213ENST00000590315 GOLGA3Q08378 1498 aa21.1■□□□□ 0.97
DDX39A-213ENST00000590315 DNAJC5Q9H3Z4 198 aa21.1■□□□□ 0.97
DDX39A-213ENST00000590315 RIMBP3CA6NJZ7 1639 aa21.1■□□□□ 0.97
DDX39A-213ENST00000590315 RIMBP3BA6NNM3 1639 aa21.1■□□□□ 0.97
DDX39A-213ENST00000590315 SHROOM2Q13796 1616 aa21.1■□□□□ 0.97
DDX39A-213ENST00000590315 RIMBP3Q9UFD9 1639 aa21.1■□□□□ 0.97
DDX39A-213ENST00000590315 KIAA0586Q9BVV6 1533 aa21.09■□□□□ 0.97
DDX39A-213ENST00000590315 ARHGEF11O15085 1522 aa21.05■□□□□ 0.96
DDX39A-213ENST00000590315 UBTFP17480 764 aaKnown RBP21.03■□□□□ 0.96
DDX39A-213ENST00000590315 ERCC6L2Q5T890 1561 aa21.01■□□□□ 0.95
DDX39A-213ENST00000590315 PRG4Q92954 1404 aaPredicted RBP20.98■□□□□ 0.95
DDX39A-213ENST00000590315 JPH4Q96JJ6 628 aa20.98■□□□□ 0.95
DDX39A-213ENST00000590315 RANGAP1P46060 587 aaPredicted RBP20.97■□□□□ 0.95
DDX39A-213ENST00000590315 UGGT2Q9NYU1 1516 aa20.94■□□□□ 0.94
DDX39A-213ENST00000590315 KIAA0556O60303 1618 aa20.93■□□□□ 0.94
DDX39A-213ENST00000590315 CARMIL2Q6F5E8 1435 aa20.92■□□□□ 0.94
DDX39A-213ENST00000590315 ARAP1Q96P48 1450 aa20.89■□□□□ 0.94
DDX39A-213ENST00000590315 TTBK1Q5TCY1 1321 aaPredicted RBP20.89■□□□□ 0.93
DDX39A-213ENST00000590315 SAMD9Q5K651 1589 aa20.86■□□□□ 0.93
DDX39A-213ENST00000590315 DISP1Q96F81 1524 aa20.86■□□□□ 0.93
DDX39A-213ENST00000590315 EFCAB5A4FU69 1503 aa20.83■□□□□ 0.92
DDX39A-213ENST00000590315 LOC105371045A0A1W2PR82 267 aa20.81■□□□□ 0.92
DDX39A-213ENST00000590315 CYB5RLQ6IPT4 315 aa20.81■□□□□ 0.92
DDX39A-213ENST00000590315 P3H3Q8IVL6 736 aa20.81■□□□□ 0.92
DDX39A-213ENST00000590315 TNIKQ9UKE5 1360 aa20.8■□□□□ 0.92
DDX39A-213ENST00000590315 PTPRGP23470 1445 aa20.75■□□□□ 0.91
DDX39A-213ENST00000590315 FHOD3Q2V2M9 1422 aa20.74■□□□□ 0.91
DDX39A-213ENST00000590315 CLIP1P30622 1438 aa20.71■□□□□ 0.91
DDX39A-213ENST00000590315 ARHGAP35Q9NRY4 1499 aa20.71■□□□□ 0.91
DDX39A-213ENST00000590315 CEP162Q5TB80 1403 aa20.7■□□□□ 0.9
DDX39A-213ENST00000590315 ADCY10Q96PN6 1610 aa20.69■□□□□ 0.9
DDX39A-213ENST00000590315 RAPGEF6Q8TEU7 1601 aa20.67■□□□□ 0.9
DDX39A-213ENST00000590315 ABCC2Q92887 1545 aa20.63■□□□□ 0.89
DDX39A-213ENST00000590315 ABCA8O94911 1581 aa20.63■□□□□ 0.89
DDX39A-213ENST00000590315 PLB1Q6P1J6 1458 aa20.62■□□□□ 0.89
DDX39A-213ENST00000590315 UACAQ9BZF9 1416 aa20.62■□□□□ 0.89
DDX39A-213ENST00000590315 ZCCHC11Q5TAX3 1644 aaKnown RBP20.59■□□□□ 0.89
DDX39A-213ENST00000590315 FMN1Q68DA7 1419 aa20.59■□□□□ 0.89
DDX39A-213ENST00000590315 HECW1Q76N89 1606 aa20.57■□□□□ 0.88
DDX39A-213ENST00000590315 PCF11O94913 1555 aaKnown RBP20.57■□□□□ 0.88
DDX39A-213ENST00000590315 NPM1P06748 294 aaKnown RBP eCLIP20.57■□□□□ 0.88
DDX39A-213ENST00000590315 UHRF1BP1LA0JNW5 1464 aa20.56■□□□□ 0.88
DDX39A-213ENST00000590315 ATP1B4Q9UN42 357 aaPredicted RBP20.55■□□□□ 0.88
DDX39A-213ENST00000590315 ARID3CA6NKF2 412 aa20.54■□□□□ 0.88
DDX39A-213ENST00000590315 LRRIQ1Q96JM4 1722 aa20.52■□□□□ 0.88
DDX39A-213ENST00000590315 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.47■□□□□ 0.87
DDX39A-213ENST00000590315 HNRNPUL2Q1KMD3 747 aaKnown RBP20.47■□□□□ 0.87
DDX39A-213ENST00000590315 NUP153P49790 1475 aaKnown RBP20.47■□□□□ 0.87
DDX39A-213ENST00000590315 KDM5BQ9UGL1 1544 aa20.47■□□□□ 0.87
DDX39A-213ENST00000590315 FYCO1Q9BQS8 1478 aa20.45■□□□□ 0.86
DDX39A-213ENST00000590315 MAPKBP1O60336 1514 aa20.44■□□□□ 0.86
DDX39A-213ENST00000590315 CDK13Q14004 1512 aaKnown RBP20.44■□□□□ 0.86
DDX39A-213ENST00000590315 CASKIN1Q8WXD9 1431 aa20.44■□□□□ 0.86
DDX39A-213ENST00000590315 KIF13AQ9H1H9 1805 aa20.41■□□□□ 0.86
DDX39A-213ENST00000590315 VPS8Q8N3P4 1428 aa20.41■□□□□ 0.86
DDX39A-213ENST00000590315 ATP10BO94823 1461 aa20.41■□□□□ 0.86
DDX39A-213ENST00000590315 EPRSP07814 1512 aaKnown RBP20.4■□□□□ 0.86
DDX39A-213ENST00000590315 ASXL2Q76L83 1435 aa20.39■□□□□ 0.85
DDX39A-213ENST00000590315 CCDC18Q5T9S5 1454 aa20.38■□□□□ 0.85
DDX39A-213ENST00000590315 TRHP20396 242 aaPredicted RBP20.37■□□□□ 0.85
DDX39A-213ENST00000590315 CFAP43Q8NDM7 1665 aa20.37■□□□□ 0.85
DDX39A-213ENST00000590315 TSPOAP1O95153 1857 aa20.36■□□□□ 0.85
DDX39A-213ENST00000590315 DIP2BQ9P265 1576 aa20.35■□□□□ 0.85
DDX39A-213ENST00000590315 WDR7Q9Y4E6 1490 aa20.35■□□□□ 0.85
DDX39A-213ENST00000590315 KCNH8Q96L42 1107 aa20.29■□□□□ 0.84
DDX39A-213ENST00000590315 PLEKHD1A6NEE1 506 aa20.28■□□□□ 0.84
DDX39A-213ENST00000590315 ABCC10Q5T3U5 1492 aa20.28■□□□□ 0.84
DDX39A-213ENST00000590315 TIAM1Q13009 1591 aa20.28■□□□□ 0.84
DDX39A-213ENST00000590315 KIF14Q15058 1648 aa20.27■□□□□ 0.84
DDX39A-213ENST00000590315 CDK11AQ9UQ88 783 aaPredicted RBP20.27■□□□□ 0.84
DDX39A-213ENST00000590315 APLP2Q06481 763 aa20.25■□□□□ 0.83
DDX39A-213ENST00000590315 FAM69CQ0P6D2 419 aa20.25■□□□□ 0.83
DDX39A-213ENST00000590315 GLI2P10070 1586 aa20.23■□□□□ 0.83
DDX39A-213ENST00000590315 MAP3K4Q9Y6R4 1608 aa20.23■□□□□ 0.83
DDX39A-213ENST00000590315 MAGI3Q5TCQ9 1506 aa20.22■□□□□ 0.83
DDX39A-213ENST00000590315 EHBP1L1Q8N3D4 1523 aa20.22■□□□□ 0.83
DDX39A-213ENST00000590315 MYO5CQ9NQX4 1742 aa20.22■□□□□ 0.83
DDX39A-213ENST00000590315 MTUS2Q5JR59 1369 aa20.21■□□□□ 0.83
DDX39A-213ENST00000590315 ABCA9Q8IUA7 1624 aa20.2■□□□□ 0.82
DDX39A-213ENST00000590315 TROQ12816 1431 aaPredicted RBP20.2■□□□□ 0.82
DDX39A-213ENST00000590315 TTC37Q6PGP7 1564 aa20.2■□□□□ 0.82
DDX39A-213ENST00000590315 SUPT6HQ7KZ85 1726 aaKnown RBP20.19■□□□□ 0.82
DDX39A-213ENST00000590315 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.17■□□□□ 0.827e-7■■□□□ 14.3
DDX39A-213ENST00000590315 PPRC1Q5VV67 1664 aaKnown RBP20.16■□□□□ 0.82
DDX39A-213ENST00000590315 MAP3K1Q13233 1512 aa20.15■□□□□ 0.82
DDX39A-213ENST00000590315 CDC42BPAQ5VT25 1732 aa20.13■□□□□ 0.81
DDX39A-213ENST00000590315 LRRC9Q6ZRR7 1453 aa20.11■□□□□ 0.81
DDX39A-213ENST00000590315 CD109Q6YHK3 1445 aa20.11■□□□□ 0.81
DDX39A-213ENST00000590315 ITSN2Q9NZM3 1697 aa20.11■□□□□ 0.81
DDX39A-213ENST00000590315 PREX2Q70Z35 1606 aa20.09■□□□□ 0.81
DDX39A-213ENST00000590315 CFAP74Q9C0B2 1584 aa20.09■□□□□ 0.81
DDX39A-213ENST00000590315 CDC42BPBQ9Y5S2 1711 aa20.09■□□□□ 0.81
DDX39A-213ENST00000590315 TEX14Q8IWB6 1497 aa20.08■□□□□ 0.81
DDX39A-213ENST00000590315 ARHGAP5Q13017 1502 aa20.06■□□□□ 0.8
DDX39A-213ENST00000590315 KANK4Q5T7N3 995 aaPredicted RBP20.04■□□□□ 0.8
DDX39A-213ENST00000590315 NCOA2Q15596 1464 aa20.04■□□□□ 0.8
DDX39A-213ENST00000590315 CCNB3Q8WWL7 1395 aa20.02■□□□□ 0.8
DDX39A-213ENST00000590315 KDM6BO15054 1643 aa20.02■□□□□ 0.79
DDX39A-213ENST00000590315 PPARGC1BQ86YN6 1023 aaKnown RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms