RNA–Protein interactions for RNA: ENST00000590116.5

ZNF554-203, Transcript of zinc finger protein 554, humanhuman

TSL 2

Gene ZNF554, Length 2,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-203ENST00000590116 LRRC9Q6ZRR7 1453 aa30.41■■■□□ 2.46
ZNF554-203ENST00000590116 PHLDB1Q86UU1 1377 aa30.39■■■□□ 2.46
ZNF554-203ENST00000590116 PCF11O94913 1555 aaKnown RBP30.38■■■□□ 2.45
ZNF554-203ENST00000590116 ATP1B4Q9UN42 357 aaPredicted RBP30.38■■■□□ 2.45
ZNF554-203ENST00000590116 NESP48681 1621 aa30.33■■■□□ 2.45
ZNF554-203ENST00000590116 MAPKBP1O60336 1514 aa30.33■■■□□ 2.45
ZNF554-203ENST00000590116 FHAD1B1AJZ9 1412 aa30.33■■■□□ 2.45
ZNF554-203ENST00000590116 FHOD3Q2V2M9 1422 aa30.32■■■□□ 2.44
ZNF554-203ENST00000590116 FAM50AQ14320 339 aaKnown RBP30.31■■■□□ 2.44
ZNF554-203ENST00000590116 DNMBPQ6XZF7 1577 aa30.31■■■□□ 2.44
ZNF554-203ENST00000590116 CFAP43Q8NDM7 1665 aa30.3■■■□□ 2.44
ZNF554-203ENST00000590116 POLA1P09884 1462 aaPredicted RBP30.29■■■□□ 2.44
ZNF554-203ENST00000590116 TOPBP1Q92547 1522 aa30.28■■■□□ 2.44
ZNF554-203ENST00000590116 ABCA10Q8WWZ4 1543 aa30.25■■■□□ 2.43
ZNF554-203ENST00000590116 SETD5Q9C0A6 1442 aa30.24■■■□□ 2.43
ZNF554-203ENST00000590116 SIN3AQ96ST3 1273 aa30.14■■■□□ 2.42
ZNF554-203ENST00000590116 EFCAB5A4FU69 1503 aa30.13■■■□□ 2.41
ZNF554-203ENST00000590116 CTTNBP2Q8WZ74 1663 aa30.13■■■□□ 2.41
ZNF554-203ENST00000590116 FYCO1Q9BQS8 1478 aa30.12■■■□□ 2.41
ZNF554-203ENST00000590116 CUL7Q14999 1698 aa30.12■■■□□ 2.41
ZNF554-203ENST00000590116 CASKIN1Q8WXD9 1431 aa30.08■■■□□ 2.41
ZNF554-203ENST00000590116 WDR97A6NE52 1622 aa30.06■■■□□ 2.4
ZNF554-203ENST00000590116 URB2Q14146 1524 aaKnown RBP30.05■■■□□ 2.4
ZNF554-203ENST00000590116 AQRO60306 1485 aaKnown RBP eCLIP30.04■■■□□ 2.4
ZNF554-203ENST00000590116 TDRD9Q8NDG6 1382 aaKnown RBP30.01■■■□□ 2.39
ZNF554-203ENST00000590116 KCNH8Q96L42 1107 aa30■■■□□ 2.39
ZNF554-203ENST00000590116 FMN1Q68DA7 1419 aa29.97■■■□□ 2.39
ZNF554-203ENST00000590116 SNAPC4Q5SXM2 1469 aa29.96■■■□□ 2.39
ZNF554-203ENST00000590116 LAMC3Q9Y6N6 1575 aa29.93■■■□□ 2.38
ZNF554-203ENST00000590116 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.92■■■□□ 2.38
ZNF554-203ENST00000590116 FGD6Q6ZV73 1430 aa29.92■■■□□ 2.38
ZNF554-203ENST00000590116 LRRIQ1Q96JM4 1722 aa29.92■■■□□ 2.38
ZNF554-203ENST00000590116 ABCA5Q8WWZ7 1642 aa29.91■■■□□ 2.38
ZNF554-203ENST00000590116 DNAJC5BQ9UF47 199 aa29.9■■■□□ 2.38
ZNF554-203ENST00000590116 MTUS2Q5JR59 1369 aa29.89■■■□□ 2.38
ZNF554-203ENST00000590116 HIRIP3Q9BW71 556 aaPredicted RBP29.88■■■□□ 2.37
ZNF554-203ENST00000590116 DDX10Q13206 875 aaKnown RBP29.87■■■□□ 2.37
ZNF554-203ENST00000590116 GAPVD1Q14C86 1478 aa29.86■■■□□ 2.37
ZNF554-203ENST00000590116 SAMD9Q5K651 1589 aa29.86■■■□□ 2.37
ZNF554-203ENST00000590116 SUPT16HQ9Y5B9 1047 aaKnown RBP29.84■■■□□ 2.37
ZNF554-203ENST00000590116 PTPRKQ15262 1439 aa29.84■■■□□ 2.37
ZNF554-203ENST00000590116 TIMELESSQ9UNS1 1208 aa29.82■■■□□ 2.36
ZNF554-203ENST00000590116 CCDC18Q5T9S5 1454 aa29.8■■■□□ 2.36
ZNF554-203ENST00000590116 KIF21AQ7Z4S6 1674 aa29.78■■■□□ 2.36
ZNF554-203ENST00000590116 GRIN2BQ13224 1484 aa29.77■■■□□ 2.36
ZNF554-203ENST00000590116 NCOA2Q15596 1464 aa29.77■■■□□ 2.36
ZNF554-203ENST00000590116 PDS5BQ9NTI5 1447 aa29.76■■■□□ 2.35
ZNF554-203ENST00000590116 PPP1R15AO75807 674 aaPredicted RBP29.75■■■□□ 2.35
ZNF554-203ENST00000590116 PTPN23Q9H3S7 1636 aa29.73■■■□□ 2.35
ZNF554-203ENST00000590116 HFM1A2PYH4 1435 aa29.71■■■□□ 2.35
ZNF554-203ENST00000590116 MYOM3Q5VTT5 1437 aa29.7■■■□□ 2.35
ZNF554-203ENST00000590116 SUPT6HQ7KZ85 1726 aaKnown RBP29.68■■■□□ 2.34
ZNF554-203ENST00000590116 MAGI3Q5TCQ9 1506 aa29.67■■■□□ 2.34
ZNF554-203ENST00000590116 TONSLQ96HA7 1378 aa29.66■■■□□ 2.34
ZNF554-203ENST00000590116 THOC2Q8NI27 1593 aaKnown RBP29.66■■■□□ 2.34
ZNF554-203ENST00000590116 NAIPQ13075 1403 aa29.65■■■□□ 2.34
ZNF554-203ENST00000590116 UACAQ9BZF9 1416 aa29.65■■■□□ 2.34
ZNF554-203ENST00000590116 EHBP1L1Q8N3D4 1523 aa29.65■■■□□ 2.34
ZNF554-203ENST00000590116 TARBP1Q13395 1621 aaKnown RBP29.64■■■□□ 2.34
ZNF554-203ENST00000590116 UGGT2Q9NYU1 1516 aa29.59■■■□□ 2.33
ZNF554-203ENST00000590116 ARID3CA6NKF2 412 aa29.57■■■□□ 2.32
ZNF554-203ENST00000590116 CHIC2Q9UKJ5 165 aa29.56■■■□□ 2.32
ZNF554-203ENST00000590116 PBRM1Q86U86 1689 aa29.56■■■□□ 2.32
ZNF554-203ENST00000590116 RRP7BPQ9NSQ0 103 aa29.56■■■□□ 2.32
ZNF554-203ENST00000590116 ARHGEF11O15085 1522 aa29.52■■■□□ 2.32
ZNF554-203ENST00000590116 CDK13Q14004 1512 aaKnown RBP29.49■■■□□ 2.31
ZNF554-203ENST00000590116 IQGAP2Q13576 1575 aa29.48■■■□□ 2.31
ZNF554-203ENST00000590116 HECW1Q76N89 1606 aa29.48■■■□□ 2.31
ZNF554-203ENST00000590116 ANP32CO43423 234 aa29.47■■■□□ 2.31
ZNF554-203ENST00000590116 BCANQ96GW7 911 aa29.46■■■□□ 2.31
ZNF554-203ENST00000590116 KDM5BQ9UGL1 1544 aa29.46■■■□□ 2.31
ZNF554-203ENST00000590116 ADAMTS12P58397 1594 aa29.45■■■□□ 2.3
ZNF554-203ENST00000590116 KDM6BO15054 1643 aa29.45■■■□□ 2.3
ZNF554-203ENST00000590116 EPRSP07814 1512 aaKnown RBP29.44■■■□□ 2.3
ZNF554-203ENST00000590116 TRIM52Q96A61 297 aa29.44■■■□□ 2.3
ZNF554-203ENST00000590116 CCER2I3L3R5 266 aa29.42■■■□□ 2.3
ZNF554-203ENST00000590116 TCOF1Q13428 1488 aaKnown RBP29.41■■■□□ 2.3
ZNF554-203ENST00000590116 DENND4BO75064 1496 aaPredicted RBP29.4■■■□□ 2.3
ZNF554-203ENST00000590116 GCC2Q8IWJ2 1684 aa29.4■■■□□ 2.3
ZNF554-203ENST00000590116 WDR62O43379 1518 aa29.37■■■□□ 2.29
ZNF554-203ENST00000590116 FKBP8Q14318 412 aa29.36■■■□□ 2.29
ZNF554-203ENST00000590116 TSHZ2Q9NRE2 1034 aa29.33■■■□□ 2.29
ZNF554-203ENST00000590116 FOXD1Q16676 465 aa29.31■■■□□ 2.28
ZNF554-203ENST00000590116 MRC2Q9UBG0 1479 aa29.31■■■□□ 2.28
ZNF554-203ENST00000590116 ZNF608Q9ULD9 1512 aaPredicted RBP29.3■■■□□ 2.28
ZNF554-203ENST00000590116 AKNAQ7Z591 1439 aa29.28■■■□□ 2.28
ZNF554-203ENST00000590116 MIA2Q96PC5 1412 aa29.28■■■□□ 2.28
ZNF554-203ENST00000590116 MYT1Q01538 1121 aa29.27■■■□□ 2.28
ZNF554-203ENST00000590116 HSPA5P11021 654 aaKnown RBP29.25■■■□□ 2.27
ZNF554-203ENST00000590116 MPHOSPH9Q99550 1183 aa29.24■■■□□ 2.27
ZNF554-203ENST00000590116 WASHC2AQ641Q2 1341 aa29.21■■■□□ 2.27
ZNF554-203ENST00000590116 ZNF644Q9H582 1327 aaPredicted RBP29.19■■■□□ 2.26
ZNF554-203ENST00000590116 KIAA0556O60303 1618 aa29.17■■■□□ 2.26
ZNF554-203ENST00000590116 DISP1Q96F81 1524 aa29.17■■■□□ 2.26
ZNF554-203ENST00000590116 L3MBTL2Q969R5 705 aa29.16■■■□□ 2.26
ZNF554-203ENST00000590116 DAPK1P53355 1430 aa29.15■■■□□ 2.26
ZNF554-203ENST00000590116 NEFLP07196 543 aa29.15■■■□□ 2.26
ZNF554-203ENST00000590116 IFT140Q96RY7 1462 aa29.14■■■□□ 2.26
ZNF554-203ENST00000590116 NUP153P49790 1475 aaKnown RBP29.14■■■□□ 2.25
ZNF554-203ENST00000590116 KIAA0586Q9BVV6 1533 aa29.12■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms