RNA–Protein interactions for RNA: ENST00000589381.5

ERCC1-210, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-210ENST00000589381 FAM9AQ8IZU1 332 aaPredicted RBP30.65■■■□□ 2.5
ERCC1-210ENST00000589381 PRXQ9BXM0 1461 aa30.63■■■□□ 2.49
ERCC1-210ENST00000589381 SHROOM2Q13796 1616 aa30.63■■■□□ 2.49
ERCC1-210ENST00000589381 KIAA0586Q9BVV6 1533 aa30.62■■■□□ 2.49
ERCC1-210ENST00000589381 JPH4Q96JJ6 628 aa30.54■■■□□ 2.48
ERCC1-210ENST00000589381 CTTNBP2Q8WZ74 1663 aa30.54■■■□□ 2.48
ERCC1-210ENST00000589381 IQGAP2Q13576 1575 aa30.52■■■□□ 2.48
ERCC1-210ENST00000589381 ARAP1Q96P48 1450 aa30.49■■■□□ 2.47
ERCC1-210ENST00000589381 PRG4Q92954 1404 aaPredicted RBP30.48■■■□□ 2.47
ERCC1-210ENST00000589381 ERCC6L2Q5T890 1561 aa30.48■■■□□ 2.47
ERCC1-210ENST00000589381 KIF21BO75037 1637 aa30.45■■■□□ 2.47
ERCC1-210ENST00000589381 CYB5RLQ6IPT4 315 aa30.45■■■□□ 2.47
ERCC1-210ENST00000589381 CARMIL2Q6F5E8 1435 aa30.32■■■□□ 2.44
ERCC1-210ENST00000589381 UGGT2Q9NYU1 1516 aa30.32■■■□□ 2.44
ERCC1-210ENST00000589381 GOLGA3Q08378 1498 aa30.27■■■□□ 2.44
ERCC1-210ENST00000589381 EHMT2Q96KQ7 1210 aa30.25■■■□□ 2.43
ERCC1-210ENST00000589381 DISP1Q96F81 1524 aa30.23■■■□□ 2.43
ERCC1-210ENST00000589381 KIAA0556O60303 1618 aa30.22■■■□□ 2.43
ERCC1-210ENST00000589381 UBTFP17480 764 aaKnown RBP30.2■■■□□ 2.43
ERCC1-210ENST00000589381 TNIKQ9UKE5 1360 aa30.17■■■□□ 2.42
ERCC1-210ENST00000589381 PTPRGP23470 1445 aa30.14■■■□□ 2.42
ERCC1-210ENST00000589381 TTBK1Q5TCY1 1321 aaPredicted RBP30.14■■■□□ 2.42
ERCC1-210ENST00000589381 RANGAP1P46060 587 aaPredicted RBP30.08■■■□□ 2.41
ERCC1-210ENST00000589381 SAMD9Q5K651 1589 aa30.07■■■□□ 2.4
ERCC1-210ENST00000589381 ADCY10Q96PN6 1610 aa30.02■■■□□ 2.4
ERCC1-210ENST00000589381 P3H3Q8IVL6 736 aa30■■■□□ 2.39
ERCC1-210ENST00000589381 EFCAB5A4FU69 1503 aa29.99■■■□□ 2.39
ERCC1-210ENST00000589381 UACAQ9BZF9 1416 aa29.95■■■□□ 2.38
ERCC1-210ENST00000589381 NPM1P06748 294 aaKnown RBP eCLIP29.94■■■□□ 2.38
ERCC1-210ENST00000589381 ABCC2Q92887 1545 aa29.91■■■□□ 2.38
ERCC1-210ENST00000589381 UHRF1BP1LA0JNW5 1464 aa29.9■■■□□ 2.38
ERCC1-210ENST00000589381 FHOD3Q2V2M9 1422 aa29.88■■■□□ 2.37
ERCC1-210ENST00000589381 PLB1Q6P1J6 1458 aa29.87■■■□□ 2.37
ERCC1-210ENST00000589381 ABCA8O94911 1581 aa29.85■■■□□ 2.37
ERCC1-210ENST00000589381 ARHGAP35Q9NRY4 1499 aa29.81■■■□□ 2.36
ERCC1-210ENST00000589381 TRHP20396 242 aaPredicted RBP29.81■■■□□ 2.36
ERCC1-210ENST00000589381 MAPKBP1O60336 1514 aa29.78■■■□□ 2.36
ERCC1-210ENST00000589381 RAPGEF6Q8TEU7 1601 aa29.78■■■□□ 2.36
ERCC1-210ENST00000589381 ZCCHC11Q5TAX3 1644 aaKnown RBP29.77■■■□□ 2.36
ERCC1-210ENST00000589381 KDM5BQ9UGL1 1544 aa29.76■■■□□ 2.35
ERCC1-210ENST00000589381 LOC105371045A0A1W2PR82 267 aa29.74■■■□□ 2.35
ERCC1-210ENST00000589381 CLIP1P30622 1438 aa29.72■■■□□ 2.35
ERCC1-210ENST00000589381 FMN1Q68DA7 1419 aa29.7■■■□□ 2.34
ERCC1-210ENST00000589381 KIF13AQ9H1H9 1805 aa29.67■■■□□ 2.34
ERCC1-210ENST00000589381 ASXL2Q76L83 1435 aa29.64■■■□□ 2.34
ERCC1-210ENST00000589381 CEP162Q5TB80 1403 aa29.63■■■□□ 2.33
ERCC1-210ENST00000589381 ARID3CA6NKF2 412 aa29.61■■■□□ 2.33
ERCC1-210ENST00000589381 NUP153P49790 1475 aaKnown RBP29.61■■■□□ 2.33
ERCC1-210ENST00000589381 ABCC10Q5T3U5 1492 aa29.6■■■□□ 2.33
ERCC1-210ENST00000589381 DIP2BQ9P265 1576 aa29.6■■■□□ 2.33
ERCC1-210ENST00000589381 ATP10BO94823 1461 aa29.59■■■□□ 2.33
ERCC1-210ENST00000589381 HECW1Q76N89 1606 aa29.57■■■□□ 2.32
ERCC1-210ENST00000589381 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.55■■■□□ 2.32
ERCC1-210ENST00000589381 FAM69CQ0P6D2 419 aa29.55■■■□□ 2.32
ERCC1-210ENST00000589381 HNRNPUL2Q1KMD3 747 aaKnown RBP29.55■■■□□ 2.32
ERCC1-210ENST00000589381 ATP1B4Q9UN42 357 aaPredicted RBP29.55■■■□□ 2.32
ERCC1-210ENST00000589381 WDR7Q9Y4E6 1490 aa29.54■■■□□ 2.32
ERCC1-210ENST00000589381 PCF11O94913 1555 aaKnown RBP29.49■■■□□ 2.31
ERCC1-210ENST00000589381 TSPOAP1O95153 1857 aa29.47■■■□□ 2.31
ERCC1-210ENST00000589381 CASKIN1Q8WXD9 1431 aa29.46■■■□□ 2.31
ERCC1-210ENST00000589381 EPRSP07814 1512 aaKnown RBP29.46■■■□□ 2.31
ERCC1-210ENST00000589381 GLI2P10070 1586 aa29.46■■■□□ 2.31
ERCC1-210ENST00000589381 LRRIQ1Q96JM4 1722 aa29.44■■■□□ 2.3
ERCC1-210ENST00000589381 CDK13Q14004 1512 aaKnown RBP29.44■■■□□ 2.3
ERCC1-210ENST00000589381 FYCO1Q9BQS8 1478 aa29.42■■■□□ 2.3
ERCC1-210ENST00000589381 KCNH8Q96L42 1107 aa29.42■■■□□ 2.3
ERCC1-210ENST00000589381 PLEKHD1A6NEE1 506 aa29.39■■■□□ 2.3
ERCC1-210ENST00000589381 CCDC18Q5T9S5 1454 aa29.36■■■□□ 2.29
ERCC1-210ENST00000589381 MAP3K4Q9Y6R4 1608 aa29.35■■■□□ 2.29
ERCC1-210ENST00000589381 CFAP43Q8NDM7 1665 aa29.35■■■□□ 2.29
ERCC1-210ENST00000589381 CDK11AQ9UQ88 783 aaPredicted RBP29.34■■■□□ 2.29
ERCC1-210ENST00000589381 ABCA9Q8IUA7 1624 aa29.27■■■□□ 2.28
ERCC1-210ENST00000589381 PPRC1Q5VV67 1664 aaKnown RBP29.27■■■□□ 2.28
ERCC1-210ENST00000589381 VPS8Q8N3P4 1428 aa29.27■■■□□ 2.28
ERCC1-210ENST00000589381 CD109Q6YHK3 1445 aa29.24■■■□□ 2.27
ERCC1-210ENST00000589381 TEX14Q8IWB6 1497 aa29.21■■■□□ 2.27
ERCC1-210ENST00000589381 TROQ12816 1431 aaPredicted RBP29.2■■■□□ 2.27
ERCC1-210ENST00000589381 KIF14Q15058 1648 aa29.18■■■□□ 2.26
ERCC1-210ENST00000589381 MAGI3Q5TCQ9 1506 aa29.16■■■□□ 2.26
ERCC1-210ENST00000589381 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.16■■■□□ 2.26
ERCC1-210ENST00000589381 TTC37Q6PGP7 1564 aa29.15■■■□□ 2.26
ERCC1-210ENST00000589381 KDM6BO15054 1643 aa29.11■■■□□ 2.25
ERCC1-210ENST00000589381 MYO5CQ9NQX4 1742 aa29.09■■■□□ 2.25
ERCC1-210ENST00000589381 TIAM1Q13009 1591 aa29.07■■■□□ 2.24
ERCC1-210ENST00000589381 MTUS2Q5JR59 1369 aa29.07■■■□□ 2.24
ERCC1-210ENST00000589381 EHBP1L1Q8N3D4 1523 aa29.03■■■□□ 2.24
ERCC1-210ENST00000589381 CFAP74Q9C0B2 1584 aa29.01■■■□□ 2.24
ERCC1-210ENST00000589381 APLP2Q06481 763 aa29■■■□□ 2.23
ERCC1-210ENST00000589381 NEO1Q92859 1461 aa28.99■■■□□ 2.23
ERCC1-210ENST00000589381 MAP3K1Q13233 1512 aa28.99■■■□□ 2.23
ERCC1-210ENST00000589381 PLCH2O75038 1416 aa28.98■■■□□ 2.23
ERCC1-210ENST00000589381 PHLDB1Q86UU1 1377 aa28.98■■■□□ 2.23
ERCC1-210ENST00000589381 FANCAO15360 1455 aa28.97■■■□□ 2.23
ERCC1-210ENST00000589381 CDC42BPAQ5VT25 1732 aa28.96■■■□□ 2.23
ERCC1-210ENST00000589381 ARAP3Q8WWN8 1544 aa28.95■■■□□ 2.23
ERCC1-210ENST00000589381 SUPT6HQ7KZ85 1726 aaKnown RBP28.94■■■□□ 2.22
ERCC1-210ENST00000589381 CDC42BPBQ9Y5S2 1711 aa28.94■■■□□ 2.22
ERCC1-210ENST00000589381 PREX2Q70Z35 1606 aa28.94■■■□□ 2.22
ERCC1-210ENST00000589381 ARHGAP5Q13017 1502 aa28.92■■■□□ 2.22
ERCC1-210ENST00000589381 LRRC9Q6ZRR7 1453 aa28.91■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 129.3 ms