RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 CHD1O14646 1710 aa19.13■□□□□ 0.65
CCBE1-203ENST00000589116 GRIN2BQ13224 1484 aa19.13■□□□□ 0.65
CCBE1-203ENST00000589116 AQRO60306 1485 aaKnown RBP eCLIP19.11■□□□□ 0.65
CCBE1-203ENST00000589116 FBLN2P98095 1184 aa19.11■□□□□ 0.65
CCBE1-203ENST00000589116 ADAMTS12P58397 1594 aa19.08■□□□□ 0.65
CCBE1-203ENST00000589116 FHAD1B1AJZ9 1412 aa19.06■□□□□ 0.64
CCBE1-203ENST00000589116 CTTNBP2Q8WZ74 1663 aa19.06■□□□□ 0.64
CCBE1-203ENST00000589116 MAGI1Q96QZ7 1491 aaPredicted RBP19■□□□□ 0.63
CCBE1-203ENST00000589116 VPS8Q8N3P4 1428 aa18.99■□□□□ 0.63
CCBE1-203ENST00000589116 SNAPC4Q5SXM2 1469 aa18.98■□□□□ 0.63
CCBE1-203ENST00000589116 ARHGAP35Q9NRY4 1499 aa18.96■□□□□ 0.63
CCBE1-203ENST00000589116 EFCAB5A4FU69 1503 aa18.93■□□□□ 0.62
CCBE1-203ENST00000589116 SYNJ2O15056 1496 aa18.9■□□□□ 0.62
CCBE1-203ENST00000589116 RANGAP1P46060 587 aaPredicted RBP18.9■□□□□ 0.62
CCBE1-203ENST00000589116 GRIN2AQ12879 1464 aa18.89■□□□□ 0.61
CCBE1-203ENST00000589116 CLASP1Q7Z460 1538 aa18.88■□□□□ 0.61
CCBE1-203ENST00000589116 IQGAP2Q13576 1575 aa18.86■□□□□ 0.61
CCBE1-203ENST00000589116 SAMD9Q5K651 1589 aa18.85■□□□□ 0.61
CCBE1-203ENST00000589116 TRIM26Q12899 539 aaPredicted RBP18.82■□□□□ 0.6
CCBE1-203ENST00000589116 CHMP7Q8WUX9 453 aaPredicted RBP18.82■□□□□ 0.6
CCBE1-203ENST00000589116 KIAA0586Q9BVV6 1533 aa18.81■□□□□ 0.6
CCBE1-203ENST00000589116 UGGT2Q9NYU1 1516 aa18.77■□□□□ 0.6
CCBE1-203ENST00000589116 NUP160Q12769 1436 aa18.76■□□□□ 0.59
CCBE1-203ENST00000589116 CEP170Q5SW79 1584 aa18.76■□□□□ 0.59
CCBE1-203ENST00000589116 FHOD3Q2V2M9 1422 aa18.75■□□□□ 0.59
CCBE1-203ENST00000589116 APLP2Q06481 763 aa18.75■□□□□ 0.59
CCBE1-203ENST00000589116 ILDR1Q86SU0 546 aaPredicted RBP18.75■□□□□ 0.59
CCBE1-203ENST00000589116 FMN1Q68DA7 1419 aa18.74■□□□□ 0.59
CCBE1-203ENST00000589116 PCGF6Q9BYE7 350 aa18.73■□□□□ 0.59
CCBE1-203ENST00000589116 MAP3K1Q13233 1512 aa18.71■□□□□ 0.59
CCBE1-203ENST00000589116 PCF11O94913 1555 aaKnown RBP18.71■□□□□ 0.59
CCBE1-203ENST00000589116 FYCO1Q9BQS8 1478 aa18.7■□□□□ 0.58
CCBE1-203ENST00000589116 PPARGC1BQ86YN6 1023 aaKnown RBP18.68■□□□□ 0.58
CCBE1-203ENST00000589116 CASKIN1Q8WXD9 1431 aa18.67■□□□□ 0.58
CCBE1-203ENST00000589116 P3H3Q8IVL6 736 aa18.67■□□□□ 0.58
CCBE1-203ENST00000589116 KIAA0556O60303 1618 aa18.66■□□□□ 0.58
CCBE1-203ENST00000589116 TIAM1Q13009 1591 aa18.65■□□□□ 0.58
CCBE1-203ENST00000589116 CFAP43Q8NDM7 1665 aa18.65■□□□□ 0.58
CCBE1-203ENST00000589116 DISP1Q96F81 1524 aa18.63■□□□□ 0.57
CCBE1-203ENST00000589116 CARMIL2Q6F5E8 1435 aa18.57■□□□□ 0.56
CCBE1-203ENST00000589116 HECW1Q76N89 1606 aa18.56■□□□□ 0.56
CCBE1-203ENST00000589116 JPH4Q96JJ6 628 aa18.55■□□□□ 0.56
CCBE1-203ENST00000589116 TTBK1Q5TCY1 1321 aaPredicted RBP18.55■□□□□ 0.56
CCBE1-203ENST00000589116 LRRC9Q6ZRR7 1453 aa18.54■□□□□ 0.56
CCBE1-203ENST00000589116 SHROOM2Q13796 1616 aa18.54■□□□□ 0.56
CCBE1-203ENST00000589116 ERCC6L2Q5T890 1561 aa18.53■□□□□ 0.56
CCBE1-203ENST00000589116 KIF13AQ9H1H9 1805 aa18.53■□□□□ 0.56
CCBE1-203ENST00000589116 KANK4Q5T7N3 995 aaPredicted RBP18.53■□□□□ 0.56
CCBE1-203ENST00000589116 CCDC18Q5T9S5 1454 aa18.52■□□□□ 0.56
CCBE1-203ENST00000589116 LRRIQ1Q96JM4 1722 aa18.52■□□□□ 0.55
CCBE1-203ENST00000589116 KDM4FA0A1W2PPD8 638 aa18.48■□□□□ 0.55
CCBE1-203ENST00000589116 ATP1B4Q9UN42 357 aaPredicted RBP18.48■□□□□ 0.55
CCBE1-203ENST00000589116 RAPGEF6Q8TEU7 1601 aa18.48■□□□□ 0.55
CCBE1-203ENST00000589116 PRG4Q92954 1404 aaPredicted RBP18.46■□□□□ 0.55
CCBE1-203ENST00000589116 EPRSP07814 1512 aaKnown RBP18.44■□□□□ 0.54
CCBE1-203ENST00000589116 EHBP1L1Q8N3D4 1523 aa18.43■□□□□ 0.54
CCBE1-203ENST00000589116 RRBP1Q9P2E9 1410 aaKnown RBP18.42■□□□□ 0.54
CCBE1-203ENST00000589116 FAM69CQ0P6D2 419 aa18.41■□□□□ 0.54
CCBE1-203ENST00000589116 NUP153P49790 1475 aaKnown RBP18.4■□□□□ 0.54
CCBE1-203ENST00000589116 MTUS2Q5JR59 1369 aa18.39■□□□□ 0.54
CCBE1-203ENST00000589116 ABCA8O94911 1581 aa18.39■□□□□ 0.54
CCBE1-203ENST00000589116 SUPT6HQ7KZ85 1726 aaKnown RBP18.38■□□□□ 0.53
CCBE1-203ENST00000589116 KDM6BO15054 1643 aa18.37■□□□□ 0.53
CCBE1-203ENST00000589116 PLB1Q6P1J6 1458 aa18.37■□□□□ 0.53
CCBE1-203ENST00000589116 CDK13Q14004 1512 aaKnown RBP18.37■□□□□ 0.53
CCBE1-203ENST00000589116 ABCC10Q5T3U5 1492 aa18.36■□□□□ 0.53
CCBE1-203ENST00000589116 PTPRGP23470 1445 aa18.35■□□□□ 0.53
CCBE1-203ENST00000589116 MAGI3Q5TCQ9 1506 aa18.34■□□□□ 0.53
CCBE1-203ENST00000589116 CCNB3Q8WWL7 1395 aa18.34■□□□□ 0.53
CCBE1-203ENST00000589116 PHLDB1Q86UU1 1377 aa18.33■□□□□ 0.52
CCBE1-203ENST00000589116 NPM1P06748 294 aaKnown RBP eCLIP18.32■□□□□ 0.52
CCBE1-203ENST00000589116 NCOA2Q15596 1464 aa18.31■□□□□ 0.52
CCBE1-203ENST00000589116 CDK11AQ9UQ88 783 aaPredicted RBP18.28■□□□□ 0.52
CCBE1-203ENST00000589116 DIP2BQ9P265 1576 aa18.28■□□□□ 0.52
CCBE1-203ENST00000589116 UACAQ9BZF9 1416 aa18.27■□□□□ 0.51
CCBE1-203ENST00000589116 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.26■□□□□ 0.51
CCBE1-203ENST00000589116 MAPKBP1O60336 1514 aa18.26■□□□□ 0.51
CCBE1-203ENST00000589116 MYOM3Q5VTT5 1437 aa18.25■□□□□ 0.51
CCBE1-203ENST00000589116 ABCC2Q92887 1545 aa18.24■□□□□ 0.51
CCBE1-203ENST00000589116 TROQ12816 1431 aaPredicted RBP18.24■□□□□ 0.51
CCBE1-203ENST00000589116 FGD6Q6ZV73 1430 aa18.24■□□□□ 0.51
CCBE1-203ENST00000589116 ADCY10Q96PN6 1610 aa18.23■□□□□ 0.51
CCBE1-203ENST00000589116 ATP10BO94823 1461 aa18.23■□□□□ 0.51
CCBE1-203ENST00000589116 HRCP23327 699 aa18.22■□□□□ 0.51
CCBE1-203ENST00000589116 TSPOAP1O95153 1857 aa18.21■□□□□ 0.51
CCBE1-203ENST00000589116 ARID3CA6NKF2 412 aa18.21■□□□□ 0.51
CCBE1-203ENST00000589116 UHRF1BP1LA0JNW5 1464 aa18.21■□□□□ 0.51
CCBE1-203ENST00000589116 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.2■□□□□ 0.5
CCBE1-203ENST00000589116 HNRNPUL2Q1KMD3 747 aaKnown RBP18.2■□□□□ 0.5
CCBE1-203ENST00000589116 HECW2Q9P2P5 1572 aa18.19■□□□□ 0.5
CCBE1-203ENST00000589116 ADGRL1O94910 1474 aa18.19■□□□□ 0.5
CCBE1-203ENST00000589116 MIA2Q96PC5 1412 aa18.17■□□□□ 0.5
CCBE1-203ENST00000589116 PTPN23Q9H3S7 1636 aa18.16■□□□□ 0.5
CCBE1-203ENST00000589116 KIF14Q15058 1648 aa18.16■□□□□ 0.5
CCBE1-203ENST00000589116 TCOF1Q13428 1488 aaKnown RBP18.15■□□□□ 0.5
CCBE1-203ENST00000589116 ITSN2Q9NZM3 1697 aa18.15■□□□□ 0.5
CCBE1-203ENST00000589116 PLEKHD1A6NEE1 506 aa18.14■□□□□ 0.49
CCBE1-203ENST00000589116 FAM50AQ14320 339 aaKnown RBP18.13■□□□□ 0.49
CCBE1-203ENST00000589116 KDM5BQ9UGL1 1544 aa18.12■□□□□ 0.49
CCBE1-203ENST00000589116 ZCCHC11Q5TAX3 1644 aaKnown RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms