RNA–Protein interactions for RNA: ENST00000588806.1

ATP6V0A1-219, Transcript of ATPase H+ transporting V0 subunit a1, humanhuman

TSL 2

Gene ATP6V0A1, Length 842 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1-219ENST00000588806 ARHGEF11O15085 1522 aa19.53■□□□□ 0.72
ATP6V0A1-219ENST00000588806 FAM9AQ8IZU1 332 aaPredicted RBP19.49■□□□□ 0.71
ATP6V0A1-219ENST00000588806 RIMBP3CA6NJZ7 1639 aa19.46■□□□□ 0.71
ATP6V0A1-219ENST00000588806 RIMBP3BA6NNM3 1639 aa19.46■□□□□ 0.71
ATP6V0A1-219ENST00000588806 RIMBP3Q9UFD9 1639 aa19.46■□□□□ 0.71
ATP6V0A1-219ENST00000588806 SHROOM2Q13796 1616 aa19.45■□□□□ 0.7
ATP6V0A1-219ENST00000588806 PRG4Q92954 1404 aaPredicted RBP19.44■□□□□ 0.7
ATP6V0A1-219ENST00000588806 CARMIL2Q6F5E8 1435 aa19.42■□□□□ 0.7
ATP6V0A1-219ENST00000588806 CYB5RLQ6IPT4 315 aa19.41■□□□□ 0.7
ATP6V0A1-219ENST00000588806 IQGAP2Q13576 1575 aa19.4■□□□□ 0.7
ATP6V0A1-219ENST00000588806 KIF21BO75037 1637 aa19.39■□□□□ 0.69
ATP6V0A1-219ENST00000588806 ARAP1Q96P48 1450 aa19.37■□□□□ 0.69
ATP6V0A1-219ENST00000588806 UGGT2Q9NYU1 1516 aa19.35■□□□□ 0.69
ATP6V0A1-219ENST00000588806 GOLGA3Q08378 1498 aa19.34■□□□□ 0.69
ATP6V0A1-219ENST00000588806 TNIKQ9UKE5 1360 aa19.32■□□□□ 0.68
ATP6V0A1-219ENST00000588806 UBTFP17480 764 aaKnown RBP19.31■□□□□ 0.68
ATP6V0A1-219ENST00000588806 CTTNBP2Q8WZ74 1663 aa19.29■□□□□ 0.68
ATP6V0A1-219ENST00000588806 ERCC6L2Q5T890 1561 aa19.28■□□□□ 0.68
ATP6V0A1-219ENST00000588806 PTPRGP23470 1445 aa19.28■□□□□ 0.68
ATP6V0A1-219ENST00000588806 DISP1Q96F81 1524 aa19.25■□□□□ 0.67
ATP6V0A1-219ENST00000588806 KIAA0556O60303 1618 aa19.19■□□□□ 0.66
ATP6V0A1-219ENST00000588806 NPM1P06748 294 aaKnown RBP eCLIP19.19■□□□□ 0.66
ATP6V0A1-219ENST00000588806 EHMT2Q96KQ7 1210 aa19.15■□□□□ 0.66
ATP6V0A1-219ENST00000588806 EFCAB5A4FU69 1503 aa19.15■□□□□ 0.66
ATP6V0A1-219ENST00000588806 UACAQ9BZF9 1416 aa19.14■□□□□ 0.65
ATP6V0A1-219ENST00000588806 UHRF1BP1LA0JNW5 1464 aa19.13■□□□□ 0.65
ATP6V0A1-219ENST00000588806 SAMD9Q5K651 1589 aa19.11■□□□□ 0.65
ATP6V0A1-219ENST00000588806 TTBK1Q5TCY1 1321 aaPredicted RBP19.11■□□□□ 0.65
ATP6V0A1-219ENST00000588806 RANGAP1P46060 587 aaPredicted RBP19.09■□□□□ 0.65
ATP6V0A1-219ENST00000588806 P3H3Q8IVL6 736 aa19.09■□□□□ 0.65
ATP6V0A1-219ENST00000588806 ABCC2Q92887 1545 aa19.05■□□□□ 0.64
ATP6V0A1-219ENST00000588806 FMN1Q68DA7 1419 aa19.02■□□□□ 0.64
ATP6V0A1-219ENST00000588806 ADCY10Q96PN6 1610 aa19.02■□□□□ 0.64
ATP6V0A1-219ENST00000588806 FHOD3Q2V2M9 1422 aa19.01■□□□□ 0.63
ATP6V0A1-219ENST00000588806 ARHGAP35Q9NRY4 1499 aa19.01■□□□□ 0.63
ATP6V0A1-219ENST00000588806 PLB1Q6P1J6 1458 aa19■□□□□ 0.63
ATP6V0A1-219ENST00000588806 ABCA8O94911 1581 aa19■□□□□ 0.63
ATP6V0A1-219ENST00000588806 KDM5BQ9UGL1 1544 aa19■□□□□ 0.63
ATP6V0A1-219ENST00000588806 MAPKBP1O60336 1514 aa18.99■□□□□ 0.63
ATP6V0A1-219ENST00000588806 CLIP1P30622 1438 aa18.99■□□□□ 0.63
ATP6V0A1-219ENST00000588806 TRHP20396 242 aaPredicted RBP18.98■□□□□ 0.63
ATP6V0A1-219ENST00000588806 LOC105371045A0A1W2PR82 267 aa18.97■□□□□ 0.63
ATP6V0A1-219ENST00000588806 RAPGEF6Q8TEU7 1601 aa18.91■□□□□ 0.62
ATP6V0A1-219ENST00000588806 CEP162Q5TB80 1403 aa18.91■□□□□ 0.62
ATP6V0A1-219ENST00000588806 ASXL2Q76L83 1435 aa18.9■□□□□ 0.62
ATP6V0A1-219ENST00000588806 ABCC10Q5T3U5 1492 aa18.89■□□□□ 0.61
ATP6V0A1-219ENST00000588806 ATP10BO94823 1461 aa18.88■□□□□ 0.61
ATP6V0A1-219ENST00000588806 NUP153P49790 1475 aaKnown RBP18.86■□□□□ 0.61
ATP6V0A1-219ENST00000588806 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.86■□□□□ 0.61
ATP6V0A1-219ENST00000588806 FAM69CQ0P6D2 419 aa18.86■□□□□ 0.61
ATP6V0A1-219ENST00000588806 HNRNPUL2Q1KMD3 747 aaKnown RBP18.86■□□□□ 0.61
ATP6V0A1-219ENST00000588806 CDK11AQ9UQ88 783 aaPredicted RBP18.86■□□□□ 0.61
ATP6V0A1-219ENST00000588806 PLEKHD1A6NEE1 506 aa18.85■□□□□ 0.61
ATP6V0A1-219ENST00000588806 ZCCHC11Q5TAX3 1644 aaKnown RBP18.85■□□□□ 0.61
ATP6V0A1-219ENST00000588806 CASKIN1Q8WXD9 1431 aa18.84■□□□□ 0.61
ATP6V0A1-219ENST00000588806 WDR7Q9Y4E6 1490 aa18.84■□□□□ 0.61
ATP6V0A1-219ENST00000588806 ATP1B4Q9UN42 357 aaPredicted RBP18.83■□□□□ 0.6
ATP6V0A1-219ENST00000588806 HECW1Q76N89 1606 aa18.81■□□□□ 0.6
ATP6V0A1-219ENST00000588806 FYCO1Q9BQS8 1478 aa18.78■□□□□ 0.6
ATP6V0A1-219ENST00000588806 GLI2P10070 1586 aa18.78■□□□□ 0.6
ATP6V0A1-219ENST00000588806 ARID3CA6NKF2 412 aa18.78■□□□□ 0.6
ATP6V0A1-219ENST00000588806 EPRSP07814 1512 aaKnown RBP18.78■□□□□ 0.6
ATP6V0A1-219ENST00000588806 CCDC18Q5T9S5 1454 aa18.77■□□□□ 0.6
ATP6V0A1-219ENST00000588806 DIP2BQ9P265 1576 aa18.76■□□□□ 0.59
ATP6V0A1-219ENST00000588806 KCNH8Q96L42 1107 aa18.75■□□□□ 0.59
ATP6V0A1-219ENST00000588806 VPS8Q8N3P4 1428 aa18.71■□□□□ 0.59
ATP6V0A1-219ENST00000588806 PCF11O94913 1555 aaKnown RBP18.69■□□□□ 0.58
ATP6V0A1-219ENST00000588806 CD109Q6YHK3 1445 aa18.68■□□□□ 0.58
ATP6V0A1-219ENST00000588806 CDK13Q14004 1512 aaKnown RBP18.68■□□□□ 0.58
ATP6V0A1-219ENST00000588806 TROQ12816 1431 aaPredicted RBP18.66■□□□□ 0.58
ATP6V0A1-219ENST00000588806 TEX14Q8IWB6 1497 aa18.66■□□□□ 0.58
ATP6V0A1-219ENST00000588806 KIF13AQ9H1H9 1805 aa18.66■□□□□ 0.58
ATP6V0A1-219ENST00000588806 PHLDB1Q86UU1 1377 aa18.64■□□□□ 0.57
ATP6V0A1-219ENST00000588806 MAGI3Q5TCQ9 1506 aa18.64■□□□□ 0.57
ATP6V0A1-219ENST00000588806 APLP2Q06481 763 aa18.62■□□□□ 0.57
ATP6V0A1-219ENST00000588806 MAP3K4Q9Y6R4 1608 aa18.62■□□□□ 0.57
ATP6V0A1-219ENST00000588806 CFAP43Q8NDM7 1665 aa18.61■□□□□ 0.57
ATP6V0A1-219ENST00000588806 ABCA9Q8IUA7 1624 aa18.6■□□□□ 0.57
ATP6V0A1-219ENST00000588806 MTUS2Q5JR59 1369 aa18.59■□□□□ 0.57
ATP6V0A1-219ENST00000588806 MAP3K1Q13233 1512 aa18.59■□□□□ 0.57
ATP6V0A1-219ENST00000588806 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.55■□□□□ 0.56
ATP6V0A1-219ENST00000588806 KIF14Q15058 1648 aa18.55■□□□□ 0.56
ATP6V0A1-219ENST00000588806 PLCH2O75038 1416 aa18.54■□□□□ 0.56
ATP6V0A1-219ENST00000588806 NEO1Q92859 1461 aa18.53■□□□□ 0.56
ATP6V0A1-219ENST00000588806 EFCAB2Q5VUJ9 269 aa18.53■□□□□ 0.56
ATP6V0A1-219ENST00000588806 LRRIQ1Q96JM4 1722 aa18.52■□□□□ 0.55
ATP6V0A1-219ENST00000588806 ARAP3Q8WWN8 1544 aa18.51■□□□□ 0.55
ATP6V0A1-219ENST00000588806 EHBP1L1Q8N3D4 1523 aa18.5■□□□□ 0.55
ATP6V0A1-219ENST00000588806 PHF23Q9BUL5 403 aaPredicted RBP18.49■□□□□ 0.55
ATP6V0A1-219ENST00000588806 TIAM1Q13009 1591 aa18.49■□□□□ 0.55
ATP6V0A1-219ENST00000588806 PPRC1Q5VV67 1664 aaKnown RBP18.48■□□□□ 0.55
ATP6V0A1-219ENST00000588806 FANCAO15360 1455 aa18.47■□□□□ 0.55
ATP6V0A1-219ENST00000588806 TSPOAP1O95153 1857 aa18.47■□□□□ 0.55
ATP6V0A1-219ENST00000588806 LRRC9Q6ZRR7 1453 aa18.46■□□□□ 0.55
ATP6V0A1-219ENST00000588806 CCNB3Q8WWL7 1395 aa18.46■□□□□ 0.55
ATP6V0A1-219ENST00000588806 CFAP74Q9C0B2 1584 aa18.46■□□□□ 0.55
ATP6V0A1-219ENST00000588806 AKNAQ7Z591 1439 aa18.45■□□□□ 0.54
ATP6V0A1-219ENST00000588806 TTC37Q6PGP7 1564 aa18.45■□□□□ 0.54
ATP6V0A1-219ENST00000588806 KDM6BO15054 1643 aa18.45■□□□□ 0.54
ATP6V0A1-219ENST00000588806 CFDP1Q9UEE9 299 aaPredicted RBP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms