RNA–Protein interactions for RNA: ENST00000588781.1

SPIDR-228, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 164 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-228ENST00000588781 URB2Q14146 1524 aaKnown RBP10.62□□□□□ -0.71
SPIDR-228ENST00000588781 RRBP1Q9P2E9 1410 aaKnown RBP10.61□□□□□ -0.71
SPIDR-228ENST00000588781 CUL7Q14999 1698 aa10.61□□□□□ -0.71
SPIDR-228ENST00000588781 ZNF316A6NFI3 1004 aaPredicted RBP10.61□□□□□ -0.71
SPIDR-228ENST00000588781 RANGAP1P46060 587 aaPredicted RBP10.61□□□□□ -0.71
SPIDR-228ENST00000588781 ABCA10Q8WWZ4 1543 aa10.61□□□□□ -0.71
SPIDR-228ENST00000588781 DIEXFQ68CQ4 756 aaKnown RBP10.6□□□□□ -0.71
SPIDR-228ENST00000588781 EFCAB5A4FU69 1503 aa10.58□□□□□ -0.72
SPIDR-228ENST00000588781 CENPBP07199 599 aaPredicted RBP10.58□□□□□ -0.72
SPIDR-228ENST00000588781 TOPBP1Q92547 1522 aa10.58□□□□□ -0.72
SPIDR-228ENST00000588781 CCNB3Q8WWL7 1395 aa10.56□□□□□ -0.72
SPIDR-228ENST00000588781 TIAM1Q13009 1591 aa10.56□□□□□ -0.72
SPIDR-228ENST00000588781 ZNF608Q9ULD9 1512 aaPredicted RBP10.55□□□□□ -0.72
SPIDR-228ENST00000588781 POLA1P09884 1462 aaPredicted RBP10.55□□□□□ -0.72
SPIDR-228ENST00000588781 AQRO60306 1485 aaKnown RBP eCLIP10.54□□□□□ -0.72
SPIDR-228ENST00000588781 IFT140Q96RY7 1462 aa10.52□□□□□ -0.73
SPIDR-228ENST00000588781 CFAP43Q8NDM7 1665 aa10.51□□□□□ -0.73
SPIDR-228ENST00000588781 FYCO1Q9BQS8 1478 aa10.51□□□□□ -0.73
SPIDR-228ENST00000588781 CHD1O14646 1710 aa10.51□□□□□ -0.73
SPIDR-228ENST00000588781 KANK4Q5T7N3 995 aaPredicted RBP10.51□□□□□ -0.73
SPIDR-228ENST00000588781 CTTNBP2Q8WZ74 1663 aa10.5□□□□□ -0.73
SPIDR-228ENST00000588781 FMN1Q68DA7 1419 aa10.5□□□□□ -0.73
SPIDR-228ENST00000588781 LRRC9Q6ZRR7 1453 aa10.5□□□□□ -0.73
SPIDR-228ENST00000588781 WDR97A6NE52 1622 aa10.49□□□□□ -0.73
SPIDR-228ENST00000588781 DHX57Q6P158 1386 aaKnown RBP10.49□□□□□ -0.73
SPIDR-228ENST00000588781 CASKIN1Q8WXD9 1431 aa10.49□□□□□ -0.73
SPIDR-228ENST00000588781 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.48□□□□□ -0.73
SPIDR-228ENST00000588781 RAD54L2Q9Y4B4 1467 aa10.48□□□□□ -0.73
SPIDR-228ENST00000588781 EIF4G3O43432 1585 aaKnown RBP10.48□□□□□ -0.73
SPIDR-228ENST00000588781 PELP1Q8IZL8 1130 aaKnown RBP10.46□□□□□ -0.73
SPIDR-228ENST00000588781 ACIN1Q9UKV3 1341 aaKnown RBP10.46□□□□□ -0.73
SPIDR-228ENST00000588781 ABCA5Q8WWZ7 1642 aa10.46□□□□□ -0.74
SPIDR-228ENST00000588781 PCF11O94913 1555 aaKnown RBP10.45□□□□□ -0.74
SPIDR-228ENST00000588781 GAPVD1Q14C86 1478 aa10.44□□□□□ -0.74
SPIDR-228ENST00000588781 SETD5Q9C0A6 1442 aa10.43□□□□□ -0.74
SPIDR-228ENST00000588781 TIMELESSQ9UNS1 1208 aa10.41□□□□□ -0.74
SPIDR-228ENST00000588781 FHOD3Q2V2M9 1422 aa10.41□□□□□ -0.74
SPIDR-228ENST00000588781 SAMD9Q5K651 1589 aa10.4□□□□□ -0.74
SPIDR-228ENST00000588781 TARBP1Q13395 1621 aaKnown RBP10.4□□□□□ -0.75
SPIDR-228ENST00000588781 RAB3GAP2Q9H2M9 1393 aa10.39□□□□□ -0.75
SPIDR-228ENST00000588781 CLASP1Q7Z460 1538 aa10.38□□□□□ -0.75
SPIDR-228ENST00000588781 SCAF1Q9H7N4 1312 aaKnown RBP10.37□□□□□ -0.75
SPIDR-228ENST00000588781 CCDC18Q5T9S5 1454 aa10.37□□□□□ -0.75
SPIDR-228ENST00000588781 ATP1B4Q9UN42 357 aaPredicted RBP10.37□□□□□ -0.75
SPIDR-228ENST00000588781 MTUS2Q5JR59 1369 aa10.37□□□□□ -0.75
SPIDR-228ENST00000588781 PHLDB1Q86UU1 1377 aa10.37□□□□□ -0.75
SPIDR-228ENST00000588781 FAM50AQ14320 339 aaKnown RBP10.36□□□□□ -0.75
SPIDR-228ENST00000588781 EHBP1L1Q8N3D4 1523 aa10.36□□□□□ -0.75
SPIDR-228ENST00000588781 TDRD9Q8NDG6 1382 aaKnown RBP10.36□□□□□ -0.75
SPIDR-228ENST00000588781 SNAPC4Q5SXM2 1469 aa10.36□□□□□ -0.75
SPIDR-228ENST00000588781 ITGAEP38570 1179 aa10.35□□□□□ -0.75
SPIDR-228ENST00000588781 FBLN2P98095 1184 aa10.35□□□□□ -0.75
SPIDR-228ENST00000588781 P3H3Q8IVL6 736 aa10.35□□□□□ -0.75
SPIDR-228ENST00000588781 ILDR1Q86SU0 546 aaPredicted RBP10.34□□□□□ -0.75
SPIDR-228ENST00000588781 PBRM1Q86U86 1689 aa10.34□□□□□ -0.75
SPIDR-228ENST00000588781 FGD6Q6ZV73 1430 aa10.33□□□□□ -0.76
SPIDR-228ENST00000588781 SUPT6HQ7KZ85 1726 aaKnown RBP10.33□□□□□ -0.76
SPIDR-228ENST00000588781 NEUROD1Q13562 356 aa10.33□□□□□ -0.76
SPIDR-228ENST00000588781 GRIN2BQ13224 1484 aa10.33□□□□□ -0.76
SPIDR-228ENST00000588781 HECW1Q76N89 1606 aa10.33□□□□□ -0.76
SPIDR-228ENST00000588781 ADAMTS12P58397 1594 aa10.31□□□□□ -0.76
SPIDR-228ENST00000588781 IQGAP2Q13576 1575 aa10.31□□□□□ -0.76
SPIDR-228ENST00000588781 MIER1Q8N108 512 aa10.3□□□□□ -0.76
SPIDR-228ENST00000588781 MYOM3Q5VTT5 1437 aa10.3□□□□□ -0.76
SPIDR-228ENST00000588781 MAPKBP1O60336 1514 aa10.29□□□□□ -0.76
SPIDR-228ENST00000588781 NCOA2Q15596 1464 aa10.28□□□□□ -0.76
SPIDR-228ENST00000588781 HFM1A2PYH4 1435 aa10.27□□□□□ -0.77
SPIDR-228ENST00000588781 UGGT2Q9NYU1 1516 aa10.27□□□□□ -0.77
SPIDR-228ENST00000588781 GTF3C3Q9Y5Q9 886 aa10.26□□□□□ -0.77
SPIDR-228ENST00000588781 AKNAQ7Z591 1439 aa10.25□□□□□ -0.77
SPIDR-228ENST00000588781 MIA2Q96PC5 1412 aa10.25□□□□□ -0.77
SPIDR-228ENST00000588781 UACAQ9BZF9 1416 aa10.25□□□□□ -0.77
SPIDR-228ENST00000588781 TCOF1Q13428 1488 aaKnown RBP10.24□□□□□ -0.77
SPIDR-228ENST00000588781 MAGI1Q96QZ7 1491 aaPredicted RBP10.24□□□□□ -0.77
SPIDR-228ENST00000588781 PTPN23Q9H3S7 1636 aa10.24□□□□□ -0.77
SPIDR-228ENST00000588781 KIF13AQ9H1H9 1805 aa10.23□□□□□ -0.77
SPIDR-228ENST00000588781 KIAA0586Q9BVV6 1533 aa10.23□□□□□ -0.77
SPIDR-228ENST00000588781 CHMP7Q8WUX9 453 aaPredicted RBP10.23□□□□□ -0.77
SPIDR-228ENST00000588781 CDK11AQ9UQ88 783 aaPredicted RBP10.22□□□□□ -0.77
SPIDR-228ENST00000588781 TONSLQ96HA7 1378 aa10.22□□□□□ -0.77
SPIDR-228ENST00000588781 EPRSP07814 1512 aaKnown RBP10.22□□□□□ -0.77
SPIDR-228ENST00000588781 YTHDC1Q96MU7 727 aaKnown RBP10.21□□□□□ -0.77
SPIDR-228ENST00000588781 SYNJ2O15056 1496 aa10.2□□□□□ -0.78
SPIDR-228ENST00000588781 LRRIQ1Q96JM4 1722 aa10.2□□□□□ -0.78
SPIDR-228ENST00000588781 GCC2Q8IWJ2 1684 aa10.18□□□□□ -0.78
SPIDR-228ENST00000588781 NAIPQ13075 1403 aa10.18□□□□□ -0.78
SPIDR-228ENST00000588781 KDM4FA0A1W2PPD8 638 aa10.18□□□□□ -0.78
SPIDR-228ENST00000588781 PPP1R15AO75807 674 aaPredicted RBP10.18□□□□□ -0.78
SPIDR-228ENST00000588781 KIAA0556O60303 1618 aa10.18□□□□□ -0.78
SPIDR-228ENST00000588781 GRIN2AQ12879 1464 aa10.17□□□□□ -0.78
SPIDR-228ENST00000588781 ERCC6L2Q5T890 1561 aa10.17□□□□□ -0.78
SPIDR-228ENST00000588781 CARMIL2Q6F5E8 1435 aa10.16□□□□□ -0.78
SPIDR-228ENST00000588781 ROCK1Q13464 1354 aa10.15□□□□□ -0.78
SPIDR-228ENST00000588781 RAPGEF6Q8TEU7 1601 aa10.15□□□□□ -0.78
SPIDR-228ENST00000588781 SIN3AQ96ST3 1273 aa10.14□□□□□ -0.79
SPIDR-228ENST00000588781 MAGI3Q5TCQ9 1506 aa10.13□□□□□ -0.79
SPIDR-228ENST00000588781 PTPRKQ15262 1439 aa10.13□□□□□ -0.79
SPIDR-228ENST00000588781 DISP1Q96F81 1524 aa10.12□□□□□ -0.79
SPIDR-228ENST00000588781 ITSN2Q9NZM3 1697 aa10.12□□□□□ -0.79
SPIDR-228ENST00000588781 CCER2I3L3R5 266 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms