RNA–Protein interactions for RNA: ENST00000588762.5

GHDC-209, Transcript of GH3 domain containing, humanhuman

TSL 1 (best)

Gene GHDC, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-209ENST00000588762 CTTNBP2Q8WZ74 1663 aa25.6■■□□□ 1.69
GHDC-209ENST00000588762 RIMBP3CA6NJZ7 1639 aa25.59■■□□□ 1.69
GHDC-209ENST00000588762 RIMBP3BA6NNM3 1639 aa25.59■■□□□ 1.69
GHDC-209ENST00000588762 SHROOM2Q13796 1616 aa25.59■■□□□ 1.69
GHDC-209ENST00000588762 RIMBP3Q9UFD9 1639 aa25.59■■□□□ 1.69
GHDC-209ENST00000588762 ARHGEF11O15085 1522 aa25.59■■□□□ 1.69
GHDC-209ENST00000588762 IQGAP2Q13576 1575 aa25.56■■□□□ 1.68
GHDC-209ENST00000588762 JPH4Q96JJ6 628 aa25.54■■□□□ 1.68
GHDC-209ENST00000588762 PRG4Q92954 1404 aaPredicted RBP25.48■■□□□ 1.67
GHDC-209ENST00000588762 GOLGA3Q08378 1498 aa25.47■■□□□ 1.67
GHDC-209ENST00000588762 ERCC6L2Q5T890 1561 aa25.44■■□□□ 1.66
GHDC-209ENST00000588762 EHMT2Q96KQ7 1210 aa25.43■■□□□ 1.66
GHDC-209ENST00000588762 UBTFP17480 764 aaKnown RBP25.4■■□□□ 1.66
GHDC-209ENST00000588762 UGGT2Q9NYU1 1516 aa25.4■■□□□ 1.66
GHDC-209ENST00000588762 ARAP1Q96P48 1450 aa25.4■■□□□ 1.66
GHDC-209ENST00000588762 CARMIL2Q6F5E8 1435 aa25.38■■□□□ 1.65
GHDC-209ENST00000588762 CYB5RLQ6IPT4 315 aa25.35■■□□□ 1.65
GHDC-209ENST00000588762 DISP1Q96F81 1524 aa25.31■■□□□ 1.64
GHDC-209ENST00000588762 KIAA0556O60303 1618 aa25.3■■□□□ 1.64
GHDC-209ENST00000588762 TNIKQ9UKE5 1360 aa25.25■■□□□ 1.63
GHDC-209ENST00000588762 RANGAP1P46060 587 aaPredicted RBP25.24■■□□□ 1.63
GHDC-209ENST00000588762 PTPRGP23470 1445 aa25.22■■□□□ 1.63
GHDC-209ENST00000588762 SAMD9Q5K651 1589 aa25.22■■□□□ 1.63
GHDC-209ENST00000588762 TTBK1Q5TCY1 1321 aaPredicted RBP25.2■■□□□ 1.62
GHDC-209ENST00000588762 EFCAB5A4FU69 1503 aa25.17■■□□□ 1.62
GHDC-209ENST00000588762 P3H3Q8IVL6 736 aa25.15■■□□□ 1.62
GHDC-209ENST00000588762 LOC105371045A0A1W2PR82 267 aa25.1■■□□□ 1.61
GHDC-209ENST00000588762 ADCY10Q96PN6 1610 aa25.07■■□□□ 1.6
GHDC-209ENST00000588762 FHOD3Q2V2M9 1422 aa25.06■■□□□ 1.6
GHDC-209ENST00000588762 UACAQ9BZF9 1416 aa25.04■■□□□ 1.6
GHDC-209ENST00000588762 ARHGAP35Q9NRY4 1499 aa25.04■■□□□ 1.6
GHDC-209ENST00000588762 CLIP1P30622 1438 aa25.02■■□□□ 1.6
GHDC-209ENST00000588762 NPM1P06748 294 aaKnown RBP eCLIP25.01■■□□□ 1.59
GHDC-209ENST00000588762 UHRF1BP1LA0JNW5 1464 aa25.01■■□□□ 1.59
GHDC-209ENST00000588762 ABCC2Q92887 1545 aa25.01■■□□□ 1.59
GHDC-209ENST00000588762 ABCA8O94911 1581 aa24.99■■□□□ 1.59
GHDC-209ENST00000588762 PLB1Q6P1J6 1458 aa24.99■■□□□ 1.59
GHDC-209ENST00000588762 CEP162Q5TB80 1403 aa24.96■■□□□ 1.59
GHDC-209ENST00000588762 RAPGEF6Q8TEU7 1601 aa24.95■■□□□ 1.58
GHDC-209ENST00000588762 FMN1Q68DA7 1419 aa24.93■■□□□ 1.58
GHDC-209ENST00000588762 KDM5BQ9UGL1 1544 aa24.88■■□□□ 1.57
GHDC-209ENST00000588762 ZCCHC11Q5TAX3 1644 aaKnown RBP24.88■■□□□ 1.57
GHDC-209ENST00000588762 MAPKBP1O60336 1514 aa24.85■■□□□ 1.57
GHDC-209ENST00000588762 HECW1Q76N89 1606 aa24.81■■□□□ 1.56
GHDC-209ENST00000588762 NUP153P49790 1475 aaKnown RBP24.81■■□□□ 1.56
GHDC-209ENST00000588762 ARID3CA6NKF2 412 aa24.79■■□□□ 1.56
GHDC-209ENST00000588762 ATP1B4Q9UN42 357 aaPredicted RBP24.79■■□□□ 1.56
GHDC-209ENST00000588762 TRHP20396 242 aaPredicted RBP24.78■■□□□ 1.56
GHDC-209ENST00000588762 ATP10BO94823 1461 aa24.77■■□□□ 1.56
GHDC-209ENST00000588762 ASXL2Q76L83 1435 aa24.77■■□□□ 1.56
GHDC-209ENST00000588762 PCF11O94913 1555 aaKnown RBP24.76■■□□□ 1.55
GHDC-209ENST00000588762 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.75■■□□□ 1.55
GHDC-209ENST00000588762 HNRNPUL2Q1KMD3 747 aaKnown RBP24.75■■□□□ 1.55
GHDC-209ENST00000588762 CASKIN1Q8WXD9 1431 aa24.75■■□□□ 1.55
GHDC-209ENST00000588762 FYCO1Q9BQS8 1478 aa24.73■■□□□ 1.55
GHDC-209ENST00000588762 KIF13AQ9H1H9 1805 aa24.71■■□□□ 1.55
GHDC-209ENST00000588762 LRRIQ1Q96JM4 1722 aa24.69■■□□□ 1.54
GHDC-209ENST00000588762 EPRSP07814 1512 aaKnown RBP24.69■■□□□ 1.54
GHDC-209ENST00000588762 ABCC10Q5T3U5 1492 aa24.69■■□□□ 1.54
GHDC-209ENST00000588762 WDR7Q9Y4E6 1490 aa24.69■■□□□ 1.54
GHDC-209ENST00000588762 DIP2BQ9P265 1576 aa24.68■■□□□ 1.54
GHDC-209ENST00000588762 CDK13Q14004 1512 aaKnown RBP24.68■■□□□ 1.54
GHDC-209ENST00000588762 CCDC18Q5T9S5 1454 aa24.65■■□□□ 1.54
GHDC-209ENST00000588762 VPS8Q8N3P4 1428 aa24.64■■□□□ 1.54
GHDC-209ENST00000588762 FAM69CQ0P6D2 419 aa24.64■■□□□ 1.54
GHDC-209ENST00000588762 PLEKHD1A6NEE1 506 aa24.63■■□□□ 1.53
GHDC-209ENST00000588762 CDK11AQ9UQ88 783 aaPredicted RBP24.61■■□□□ 1.53
GHDC-209ENST00000588762 KCNH8Q96L42 1107 aa24.6■■□□□ 1.53
GHDC-209ENST00000588762 GLI2P10070 1586 aa24.59■■□□□ 1.53
GHDC-209ENST00000588762 TSPOAP1O95153 1857 aa24.55■■□□□ 1.52
GHDC-209ENST00000588762 CFAP43Q8NDM7 1665 aa24.52■■□□□ 1.52
GHDC-209ENST00000588762 MAP3K4Q9Y6R4 1608 aa24.51■■□□□ 1.51
GHDC-209ENST00000588762 TROQ12816 1431 aaPredicted RBP24.49■■□□□ 1.51
GHDC-209ENST00000588762 ABCA9Q8IUA7 1624 aa24.49■■□□□ 1.51
GHDC-209ENST00000588762 KIF14Q15058 1648 aa24.46■■□□□ 1.51
GHDC-209ENST00000588762 TIAM1Q13009 1591 aa24.44■■□□□ 1.5
GHDC-209ENST00000588762 MAGI3Q5TCQ9 1506 aa24.44■■□□□ 1.5
GHDC-209ENST00000588762 CD109Q6YHK3 1445 aa24.44■■□□□ 1.5
GHDC-209ENST00000588762 MTUS2Q5JR59 1369 aa24.42■■□□□ 1.5
GHDC-209ENST00000588762 APLP2Q06481 763 aa24.42■■□□□ 1.5
GHDC-209ENST00000588762 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.41■■□□□ 1.5
GHDC-209ENST00000588762 PPRC1Q5VV67 1664 aaKnown RBP24.41■■□□□ 1.5
GHDC-209ENST00000588762 MAP3K1Q13233 1512 aa24.4■■□□□ 1.5
GHDC-209ENST00000588762 TTC37Q6PGP7 1564 aa24.39■■□□□ 1.5
GHDC-209ENST00000588762 TEX14Q8IWB6 1497 aa24.38■■□□□ 1.49
GHDC-209ENST00000588762 EHBP1L1Q8N3D4 1523 aa24.38■■□□□ 1.49
GHDC-209ENST00000588762 MYO5CQ9NQX4 1742 aa24.36■■□□□ 1.49
GHDC-209ENST00000588762 LRRC9Q6ZRR7 1453 aa24.32■■□□□ 1.48
GHDC-209ENST00000588762 SUPT6HQ7KZ85 1726 aaKnown RBP24.31■■□□□ 1.48
GHDC-209ENST00000588762 CFAP74Q9C0B2 1584 aa24.28■■□□□ 1.48
GHDC-209ENST00000588762 CDC42BPAQ5VT25 1732 aa24.27■■□□□ 1.48
GHDC-209ENST00000588762 PLCH2O75038 1416 aa24.27■■□□□ 1.48
GHDC-209ENST00000588762 PREX2Q70Z35 1606 aa24.25■■□□□ 1.47
GHDC-209ENST00000588762 KANK4Q5T7N3 995 aaPredicted RBP24.25■■□□□ 1.47
GHDC-209ENST00000588762 ARAP3Q8WWN8 1544 aa24.25■■□□□ 1.47
GHDC-209ENST00000588762 KDM6BO15054 1643 aa24.24■■□□□ 1.47
GHDC-209ENST00000588762 CDC42BPBQ9Y5S2 1711 aa24.24■■□□□ 1.47
GHDC-209ENST00000588762 FANCAO15360 1455 aa24.24■■□□□ 1.47
GHDC-209ENST00000588762 NEO1Q92859 1461 aa24.24■■□□□ 1.47
GHDC-209ENST00000588762 CCNB3Q8WWL7 1395 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms