RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 TOP2AP11388 1531 aaKnown RBP13.84□□□□□ -0.19
TPM4-210ENST00000588507 SHROOM2Q13796 1616 aa13.83□□□□□ -0.2
TPM4-210ENST00000588507 COL17A1Q9UMD9 1497 aaPredicted RBP13.8□□□□□ -0.2
TPM4-210ENST00000588507 NUP160Q12769 1436 aa13.8□□□□□ -0.2
TPM4-210ENST00000588507 PRG4Q92954 1404 aaPredicted RBP13.79□□□□□ -0.2
TPM4-210ENST00000588507 GRIN2AQ12879 1464 aa13.79□□□□□ -0.2
TPM4-210ENST00000588507 PBRM1Q86U86 1689 aa13.77□□□□□ -0.21
TPM4-210ENST00000588507 FGD5Q6ZNL6 1462 aa13.76□□□□□ -0.21
TPM4-210ENST00000588507 ADCY10Q96PN6 1610 aa13.74□□□□□ -0.21
TPM4-210ENST00000588507 PPRC1Q5VV67 1664 aaKnown RBP13.73□□□□□ -0.21
TPM4-210ENST00000588507 JPH4Q96JJ6 628 aa13.72□□□□□ -0.21
TPM4-210ENST00000588507 CCDC88BA6NC98 1476 aa13.72□□□□□ -0.21
TPM4-210ENST00000588507 PCF11O94913 1555 aaKnown RBP13.71□□□□□ -0.21
TPM4-210ENST00000588507 PTPRMP28827 1452 aa13.68□□□□□ -0.22
TPM4-210ENST00000588507 GLI2P10070 1586 aa13.66□□□□□ -0.22
TPM4-210ENST00000588507 TEX14Q8IWB6 1497 aa13.63□□□□□ -0.23
TPM4-210ENST00000588507 HSPA2P54652 639 aa13.63□□□□□ -0.23
TPM4-210ENST00000588507 PLB1Q6P1J6 1458 aa13.6□□□□□ -0.23
TPM4-210ENST00000588507 ABCA5Q8WWZ7 1642 aa13.59□□□□□ -0.23
TPM4-210ENST00000588507 ADAMTS12P58397 1594 aa13.58□□□□□ -0.23
TPM4-210ENST00000588507 ASXL2Q76L83 1435 aa13.57□□□□□ -0.24
TPM4-210ENST00000588507 FHAD1B1AJZ9 1412 aa13.56□□□□□ -0.24
TPM4-210ENST00000588507 KIF21BO75037 1637 aa13.55□□□□□ -0.24
TPM4-210ENST00000588507 ADAMTSL3P82987 1691 aa13.54□□□□□ -0.24
TPM4-210ENST00000588507 CUX1P39880 1505 aa13.54□□□□□ -0.24
TPM4-210ENST00000588507 ABCA10Q8WWZ4 1543 aa13.54□□□□□ -0.24
TPM4-210ENST00000588507 MAP3K4Q9Y6R4 1608 aa13.51□□□□□ -0.25
TPM4-210ENST00000588507 ABCC2Q92887 1545 aa13.49□□□□□ -0.25
TPM4-210ENST00000588507 EPRSP07814 1512 aaKnown RBP13.48□□□□□ -0.25
TPM4-210ENST00000588507 KIAA0586Q9BVV6 1533 aa13.48□□□□□ -0.25
TPM4-210ENST00000588507 DMRT2Q9Y5R5 561 aa13.46□□□□□ -0.25
TPM4-210ENST00000588507 PTPRGP23470 1445 aa13.43□□□□□ -0.26
TPM4-210ENST00000588507 RUSC2Q8N2Y8 1516 aa13.41□□□□□ -0.26
TPM4-210ENST00000588507 MADDQ8WXG6 1647 aa13.4□□□□□ -0.26
TPM4-210ENST00000588507 TTBK1Q5TCY1 1321 aaPredicted RBP13.39□□□□□ -0.27
TPM4-210ENST00000588507 ARID4BQ4LE39 1312 aaPredicted RBP13.38□□□□□ -0.27
TPM4-210ENST00000588507 CUL7Q14999 1698 aa13.37□□□□□ -0.27
TPM4-210ENST00000588507 IQSEC2Q5JU85 1478 aa13.37□□□□□ -0.27
TPM4-210ENST00000588507 BCORL1Q5H9F3 1711 aa13.37□□□□□ -0.27
TPM4-210ENST00000588507 PLPPR3Q6T4P5 718 aa13.37□□□□□ -0.27
TPM4-210ENST00000588507 YEATS2Q9ULM3 1422 aa13.37□□□□□ -0.27
TPM4-210ENST00000588507 MED1Q15648 1581 aaPredicted RBP13.37□□□□□ -0.27
TPM4-210ENST00000588507 PHF23Q9BUL5 403 aaPredicted RBP13.36□□□□□ -0.27
TPM4-210ENST00000588507 ERICH3Q5RHP9 1530 aa13.34□□□□□ -0.27
TPM4-210ENST00000588507 MAGI3Q5TCQ9 1506 aa13.34□□□□□ -0.27
TPM4-210ENST00000588507 RIMS1Q86UR5 1692 aaKnown RBP13.33□□□□□ -0.28
TPM4-210ENST00000588507 UHRF1BP1LA0JNW5 1464 aa13.32□□□□□ -0.28
TPM4-210ENST00000588507 CD109Q6YHK3 1445 aa13.31□□□□□ -0.28
TPM4-210ENST00000588507 UBAP1LF5GYI3 381 aa13.3□□□□□ -0.28
TPM4-210ENST00000588507 TNIKQ9UKE5 1360 aa13.29□□□□□ -0.28
TPM4-210ENST00000588507 LTBP4Q8N2S1 1624 aa13.28□□□□□ -0.28
TPM4-210ENST00000588507 WRNQ14191 1432 aaPredicted RBP eCLIP13.27□□□□□ -0.29
TPM4-210ENST00000588507 UACAQ9BZF9 1416 aa13.27□□□□□ -0.29
TPM4-210ENST00000588507 ARAP3Q8WWN8 1544 aa13.27□□□□□ -0.29
TPM4-210ENST00000588507 KDM5BQ9UGL1 1544 aa13.27□□□□□ -0.29
TPM4-210ENST00000588507 PTPRTO14522 1441 aa13.26□□□□□ -0.29
TPM4-210ENST00000588507 STRCQ7RTU9 1775 aa13.25□□□□□ -0.29
TPM4-210ENST00000588507 WDR7Q9Y4E6 1490 aa13.23□□□□□ -0.29
TPM4-210ENST00000588507 CFAP43Q8NDM7 1665 aa13.22□□□□□ -0.29
TPM4-210ENST00000588507 HSPA1LP34931 641 aa13.22□□□□□ -0.29
TPM4-210ENST00000588507 CARMIL2Q6F5E8 1435 aa13.22□□□□□ -0.29
TPM4-210ENST00000588507 ZCCHC11Q5TAX3 1644 aaKnown RBP13.2□□□□□ -0.3
TPM4-210ENST00000588507 KCNH8Q96L42 1107 aa13.19□□□□□ -0.3
TPM4-210ENST00000588507 RAPGEF3O95398 923 aa13.18□□□□□ -0.3
TPM4-210ENST00000588507 PREX1Q8TCU6 1659 aa13.16□□□□□ -0.3
TPM4-210ENST00000588507 PHLDB1Q86UU1 1377 aa13.16□□□□□ -0.3
TPM4-210ENST00000588507 POGZQ7Z3K3 1410 aa13.15□□□□□ -0.3
TPM4-210ENST00000588507 SCAF1Q9H7N4 1312 aaKnown RBP13.13□□□□□ -0.31
TPM4-210ENST00000588507 PIP4K2BP78356 416 aa13.09□□□□□ -0.31
TPM4-210ENST00000588507 UHRF1BP1Q6BDS2 1440 aa13.09□□□□□ -0.31
TPM4-210ENST00000588507 TTC37Q6PGP7 1564 aa13.08□□□□□ -0.32
TPM4-210ENST00000588507 MLECQ14165 292 aa13.07□□□□□ -0.32
TPM4-210ENST00000588507 RGS17Q9UGC6 210 aaPredicted RBP13.07□□□□□ -0.32
TPM4-210ENST00000588507 FANCAO15360 1455 aa13.07□□□□□ -0.32
TPM4-210ENST00000588507 CEBPAP49715 358 aaPredicted RBP13.05□□□□□ -0.32
TPM4-210ENST00000588507 ZNF335Q9H4Z2 1342 aaPredicted RBP13.04□□□□□ -0.32
TPM4-210ENST00000588507 FER1L4A9Z1Z3 1794 aa13.04□□□□□ -0.32
TPM4-210ENST00000588507 ARHGEF40Q8TER5 1519 aa13.03□□□□□ -0.32
TPM4-210ENST00000588507 TOM1O60784 492 aa13.03□□□□□ -0.32
TPM4-210ENST00000588507 SETD1BQ9UPS6 1966 aaKnown RBP13.02□□□□□ -0.32
TPM4-210ENST00000588507 FRMPD1Q5SYB0 1578 aa13.01□□□□□ -0.33
TPM4-210ENST00000588507 AKNAQ7Z591 1439 aa13□□□□□ -0.33
TPM4-210ENST00000588507 NEO1Q92859 1461 aa12.99□□□□□ -0.33
TPM4-210ENST00000588507 DISP1Q96F81 1524 aa12.98□□□□□ -0.33
TPM4-210ENST00000588507 NCOA1Q15788 1441 aa12.98□□□□□ -0.33
TPM4-210ENST00000588507 BIVM-ERCC5R4GMW8 1640 aa12.97□□□□□ -0.33
TPM4-210ENST00000588507 POTEAQ6S8J7 498 aa12.96□□□□□ -0.33
TPM4-210ENST00000588507 IQGAP2Q13576 1575 aa12.93□□□□□ -0.34
TPM4-210ENST00000588507 ARHGEF12Q9NZN5 1544 aa12.93□□□□□ -0.34
TPM4-210ENST00000588507 SIGLEC1Q9BZZ2 1709 aa12.92□□□□□ -0.34
TPM4-210ENST00000588507 IGF1RP08069 1367 aa12.92□□□□□ -0.34
TPM4-210ENST00000588507 UPF1Q92900 1129 aaKnown RBP eCLIP12.91□□□□□ -0.34
TPM4-210ENST00000588507 DENND4BO75064 1496 aaPredicted RBP12.91□□□□□ -0.34
TPM4-210ENST00000588507 FHOD3Q2V2M9 1422 aa12.89□□□□□ -0.35
TPM4-210ENST00000588507 NCKAP5LQ9HCH0 1330 aa12.88□□□□□ -0.35
TPM4-210ENST00000588507 ZFYVE16Q7Z3T8 1539 aa12.88□□□□□ -0.35
TPM4-210ENST00000588507 KIAA0556O60303 1618 aa12.88□□□□□ -0.35
TPM4-210ENST00000588507 ABCA9Q8IUA7 1624 aa12.88□□□□□ -0.35
TPM4-210ENST00000588507 SENP3Q9H4L4 574 aaPredicted RBP12.87□□□□□ -0.35
TPM4-210ENST00000588507 EFCAB5A4FU69 1503 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms