RNA–Protein interactions for RNA: ENST00000588138.1

ATP6V0A1-217, Transcript of ATPase H+ transporting V0 subunit a1, humanhuman

TSL 5

Gene ATP6V0A1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1-217ENST00000588138 TNIKQ9UKE5 1360 aa19.14■□□□□ 0.65
ATP6V0A1-217ENST00000588138 RIMBP3CA6NJZ7 1639 aa19.14■□□□□ 0.65
ATP6V0A1-217ENST00000588138 RIMBP3BA6NNM3 1639 aa19.14■□□□□ 0.65
ATP6V0A1-217ENST00000588138 RIMBP3Q9UFD9 1639 aa19.14■□□□□ 0.65
ATP6V0A1-217ENST00000588138 ARHGEF11O15085 1522 aa19.1■□□□□ 0.65
ATP6V0A1-217ENST00000588138 NUP160Q12769 1436 aa19.1■□□□□ 0.65
ATP6V0A1-217ENST00000588138 CEP170Q5SW79 1584 aa19.06■□□□□ 0.64
ATP6V0A1-217ENST00000588138 CLASP1Q7Z460 1538 aa19.03■□□□□ 0.64
ATP6V0A1-217ENST00000588138 KIAA0586Q9BVV6 1533 aa19.01■□□□□ 0.63
ATP6V0A1-217ENST00000588138 CTTNBP2Q8WZ74 1663 aa19■□□□□ 0.63
ATP6V0A1-217ENST00000588138 CEP162Q5TB80 1403 aa18.99■□□□□ 0.63
ATP6V0A1-217ENST00000588138 SHROOM2Q13796 1616 aa18.95■□□□□ 0.62
ATP6V0A1-217ENST00000588138 IQGAP2Q13576 1575 aa18.94■□□□□ 0.62
ATP6V0A1-217ENST00000588138 ARAP1Q96P48 1450 aa18.93■□□□□ 0.62
ATP6V0A1-217ENST00000588138 CYB5RLQ6IPT4 315 aa18.93■□□□□ 0.62
ATP6V0A1-217ENST00000588138 CLIP1P30622 1438 aa18.92■□□□□ 0.62
ATP6V0A1-217ENST00000588138 UGGT2Q9NYU1 1516 aa18.89■□□□□ 0.61
ATP6V0A1-217ENST00000588138 RANGAP1P46060 587 aaPredicted RBP18.87■□□□□ 0.61
ATP6V0A1-217ENST00000588138 JPH4Q96JJ6 628 aa18.86■□□□□ 0.61
ATP6V0A1-217ENST00000588138 EFCAB5A4FU69 1503 aa18.83■□□□□ 0.6
ATP6V0A1-217ENST00000588138 ARHGAP35Q9NRY4 1499 aa18.82■□□□□ 0.6
ATP6V0A1-217ENST00000588138 PRG4Q92954 1404 aaPredicted RBP18.79■□□□□ 0.6
ATP6V0A1-217ENST00000588138 SAMD9Q5K651 1589 aa18.79■□□□□ 0.6
ATP6V0A1-217ENST00000588138 DISP1Q96F81 1524 aa18.79■□□□□ 0.6
ATP6V0A1-217ENST00000588138 CARMIL2Q6F5E8 1435 aa18.77■□□□□ 0.6
ATP6V0A1-217ENST00000588138 KIAA0556O60303 1618 aa18.75■□□□□ 0.59
ATP6V0A1-217ENST00000588138 ERCC6L2Q5T890 1561 aa18.73■□□□□ 0.59
ATP6V0A1-217ENST00000588138 VPS8Q8N3P4 1428 aa18.73■□□□□ 0.59
ATP6V0A1-217ENST00000588138 P3H3Q8IVL6 736 aa18.71■□□□□ 0.59
ATP6V0A1-217ENST00000588138 FHOD3Q2V2M9 1422 aa18.71■□□□□ 0.59
ATP6V0A1-217ENST00000588138 FMN1Q68DA7 1419 aa18.66■□□□□ 0.58
ATP6V0A1-217ENST00000588138 TRHP20396 242 aaPredicted RBP18.64■□□□□ 0.57
ATP6V0A1-217ENST00000588138 PTPRGP23470 1445 aa18.62■□□□□ 0.57
ATP6V0A1-217ENST00000588138 CASKIN1Q8WXD9 1431 aa18.57■□□□□ 0.56
ATP6V0A1-217ENST00000588138 FYCO1Q9BQS8 1478 aa18.56■□□□□ 0.56
ATP6V0A1-217ENST00000588138 PCF11O94913 1555 aaKnown RBP18.55■□□□□ 0.56
ATP6V0A1-217ENST00000588138 UHRF1BP1LA0JNW5 1464 aa18.55■□□□□ 0.56
ATP6V0A1-217ENST00000588138 APLP2Q06481 763 aa18.54■□□□□ 0.56
ATP6V0A1-217ENST00000588138 ABCA8O94911 1581 aa18.54■□□□□ 0.56
ATP6V0A1-217ENST00000588138 UACAQ9BZF9 1416 aa18.52■□□□□ 0.56
ATP6V0A1-217ENST00000588138 TTBK1Q5TCY1 1321 aaPredicted RBP18.5■□□□□ 0.55
ATP6V0A1-217ENST00000588138 ABCC2Q92887 1545 aa18.5■□□□□ 0.55
ATP6V0A1-217ENST00000588138 RAPGEF6Q8TEU7 1601 aa18.49■□□□□ 0.55
ATP6V0A1-217ENST00000588138 ATP1B4Q9UN42 357 aaPredicted RBP18.49■□□□□ 0.55
ATP6V0A1-217ENST00000588138 PLB1Q6P1J6 1458 aa18.49■□□□□ 0.55
ATP6V0A1-217ENST00000588138 HECW1Q76N89 1606 aa18.49■□□□□ 0.55
ATP6V0A1-217ENST00000588138 ADCY10Q96PN6 1610 aa18.49■□□□□ 0.55
ATP6V0A1-217ENST00000588138 MAP3K1Q13233 1512 aa18.48■□□□□ 0.55
ATP6V0A1-217ENST00000588138 CCDC18Q5T9S5 1454 aa18.44■□□□□ 0.54
ATP6V0A1-217ENST00000588138 KDM5BQ9UGL1 1544 aa18.44■□□□□ 0.54
ATP6V0A1-217ENST00000588138 TIAM1Q13009 1591 aa18.43■□□□□ 0.54
ATP6V0A1-217ENST00000588138 NUP153P49790 1475 aaKnown RBP18.43■□□□□ 0.54
ATP6V0A1-217ENST00000588138 CFAP43Q8NDM7 1665 aa18.41■□□□□ 0.54
ATP6V0A1-217ENST00000588138 EPRSP07814 1512 aaKnown RBP18.4■□□□□ 0.54
ATP6V0A1-217ENST00000588138 PPARGC1BQ86YN6 1023 aaKnown RBP18.37■□□□□ 0.53
ATP6V0A1-217ENST00000588138 ATP10BO94823 1461 aa18.37■□□□□ 0.53
ATP6V0A1-217ENST00000588138 ZCCHC11Q5TAX3 1644 aaKnown RBP18.37■□□□□ 0.53
ATP6V0A1-217ENST00000588138 LRRIQ1Q96JM4 1722 aa18.37■□□□□ 0.53
ATP6V0A1-217ENST00000588138 NPM1P06748 294 aaKnown RBP eCLIP18.36■□□□□ 0.53
ATP6V0A1-217ENST00000588138 LRRC9Q6ZRR7 1453 aa18.35■□□□□ 0.53
ATP6V0A1-217ENST00000588138 KANK4Q5T7N3 995 aaPredicted RBP18.35■□□□□ 0.53
ATP6V0A1-217ENST00000588138 CDK13Q14004 1512 aaKnown RBP18.34■□□□□ 0.53
ATP6V0A1-217ENST00000588138 MAPKBP1O60336 1514 aa18.33■□□□□ 0.53
ATP6V0A1-217ENST00000588138 KIF13AQ9H1H9 1805 aa18.33■□□□□ 0.52
ATP6V0A1-217ENST00000588138 ARID3CA6NKF2 412 aa18.32■□□□□ 0.52
ATP6V0A1-217ENST00000588138 CDK11AQ9UQ88 783 aaPredicted RBP18.32■□□□□ 0.52
ATP6V0A1-217ENST00000588138 MTUS2Q5JR59 1369 aa18.31■□□□□ 0.52
ATP6V0A1-217ENST00000588138 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.31■□□□□ 0.52
ATP6V0A1-217ENST00000588138 HNRNPUL2Q1KMD3 747 aaKnown RBP18.31■□□□□ 0.52
ATP6V0A1-217ENST00000588138 EHBP1L1Q8N3D4 1523 aa18.29■□□□□ 0.52
ATP6V0A1-217ENST00000588138 ABCC10Q5T3U5 1492 aa18.27■□□□□ 0.52
ATP6V0A1-217ENST00000588138 ASXL2Q76L83 1435 aa18.25■□□□□ 0.51
ATP6V0A1-217ENST00000588138 MAGI3Q5TCQ9 1506 aa18.25■□□□□ 0.51
ATP6V0A1-217ENST00000588138 DIP2BQ9P265 1576 aa18.25■□□□□ 0.51
ATP6V0A1-217ENST00000588138 PLEKHD1A6NEE1 506 aa18.24■□□□□ 0.51
ATP6V0A1-217ENST00000588138 FAM69CQ0P6D2 419 aa18.24■□□□□ 0.51
ATP6V0A1-217ENST00000588138 WDR7Q9Y4E6 1490 aa18.24■□□□□ 0.51
ATP6V0A1-217ENST00000588138 TROQ12816 1431 aaPredicted RBP18.23■□□□□ 0.51
ATP6V0A1-217ENST00000588138 SUPT6HQ7KZ85 1726 aaKnown RBP18.21■□□□□ 0.51
ATP6V0A1-217ENST00000588138 TRIM26Q12899 539 aaPredicted RBP18.21■□□□□ 0.51
ATP6V0A1-217ENST00000588138 NCOA2Q15596 1464 aa18.18■□□□□ 0.5
ATP6V0A1-217ENST00000588138 GLI2P10070 1586 aa18.17■□□□□ 0.5
ATP6V0A1-217ENST00000588138 PHLDB1Q86UU1 1377 aa18.15■□□□□ 0.5
ATP6V0A1-217ENST00000588138 KIF14Q15058 1648 aa18.14■□□□□ 0.49
ATP6V0A1-217ENST00000588138 ABCA9Q8IUA7 1624 aa18.12■□□□□ 0.49
ATP6V0A1-217ENST00000588138 RRBP1Q9P2E9 1410 aaKnown RBP18.11■□□□□ 0.49
ATP6V0A1-217ENST00000588138 MYOM3Q5VTT5 1437 aa18.1■□□□□ 0.49
ATP6V0A1-217ENST00000588138 TSPOAP1O95153 1857 aa18.09■□□□□ 0.49
ATP6V0A1-217ENST00000588138 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.09■□□□□ 0.49
ATP6V0A1-217ENST00000588138 CCNB3Q8WWL7 1395 aa18.09■□□□□ 0.49
ATP6V0A1-217ENST00000588138 MAP3K4Q9Y6R4 1608 aa18.09■□□□□ 0.49
ATP6V0A1-217ENST00000588138 KCNH8Q96L42 1107 aa18.07■□□□□ 0.48
ATP6V0A1-217ENST00000588138 PCGF6Q9BYE7 350 aa18.07■□□□□ 0.48
ATP6V0A1-217ENST00000588138 FGD6Q6ZV73 1430 aa18.06■□□□□ 0.48
ATP6V0A1-217ENST00000588138 MIA2Q96PC5 1412 aa18.06■□□□□ 0.48
ATP6V0A1-217ENST00000588138 TTC37Q6PGP7 1564 aa18.05■□□□□ 0.48
ATP6V0A1-217ENST00000588138 ARAP3Q8WWN8 1544 aa18.05■□□□□ 0.48
ATP6V0A1-217ENST00000588138 ITSN2Q9NZM3 1697 aa18.03■□□□□ 0.48
ATP6V0A1-217ENST00000588138 KDM6BO15054 1643 aa18.03■□□□□ 0.48
ATP6V0A1-217ENST00000588138 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms