RNA–Protein interactions for RNA: ENST00000587880.1

BECN1-207, Transcript of beclin 1, humanhuman

TSL 3

Gene BECN1, Length 524 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BECN1-207ENST00000587880 SSUH2Q9Y2M2 353 aa9.86□□□□□ -0.83
BECN1-207ENST00000587880 KIF21BO75037 1637 aa9.85□□□□□ -0.83
BECN1-207ENST00000587880 GOLGA3Q08378 1498 aa9.85□□□□□ -0.83
BECN1-207ENST00000587880 MYT1Q01538 1121 aa9.85□□□□□ -0.83
BECN1-207ENST00000587880 PEG3Q9GZU2 1588 aa9.84□□□□□ -0.83
BECN1-207ENST00000587880 DIEXFQ68CQ4 756 aaKnown RBP9.81□□□□□ -0.84
BECN1-207ENST00000587880 PABPN1Q86U42 306 aaKnown RBP eCLIP9.8□□□□□ -0.84
BECN1-207ENST00000587880 NEUROD1Q13562 356 aa9.79□□□□□ -0.84
BECN1-207ENST00000587880 SOGA1O94964 1423 aa9.78□□□□□ -0.84
BECN1-207ENST00000587880 BAZ1BQ9UIG0 1483 aaKnown RBP9.78□□□□□ -0.84
BECN1-207ENST00000587880 CEP164Q9UPV0 1460 aa9.78□□□□□ -0.84
BECN1-207ENST00000587880 AMER1Q5JTC6 1135 aaPredicted RBP9.76□□□□□ -0.85
BECN1-207ENST00000587880 RTN4Q9NQC3 1192 aaKnown RBP9.76□□□□□ -0.85
BECN1-207ENST00000587880 VASPP50552 380 aaPredicted RBP9.75□□□□□ -0.85
BECN1-207ENST00000587880 RBM42Q9BTD8 480 aaKnown RBP9.73□□□□□ -0.85
BECN1-207ENST00000587880 SYNJ1O43426 1573 aa9.72□□□□□ -0.85
BECN1-207ENST00000587880 ZNF316A6NFI3 1004 aaPredicted RBP9.72□□□□□ -0.85
BECN1-207ENST00000587880 GTF3C3Q9Y5Q9 886 aa9.71□□□□□ -0.86
BECN1-207ENST00000587880 RUSC2Q8N2Y8 1516 aa9.71□□□□□ -0.86
BECN1-207ENST00000587880 VPS8Q8N3P4 1428 aa9.7□□□□□ -0.86
BECN1-207ENST00000587880 BICRAQ9NZM4 1560 aa9.7□□□□□ -0.86
BECN1-207ENST00000587880 CLIP1P30622 1438 aa9.67□□□□□ -0.86
BECN1-207ENST00000587880 STAG3Q9UJ98 1225 aa9.67□□□□□ -0.86
BECN1-207ENST00000587880 BIVM-ERCC5R4GMW8 1640 aa9.67□□□□□ -0.86
BECN1-207ENST00000587880 ERICH3Q5RHP9 1530 aa9.66□□□□□ -0.86
BECN1-207ENST00000587880 AKT1S1Q96B36 256 aa9.66□□□□□ -0.86
BECN1-207ENST00000587880 CLSPNQ9HAW4 1339 aa9.65□□□□□ -0.86
BECN1-207ENST00000587880 TOP2BQ02880 1626 aa9.65□□□□□ -0.86
BECN1-207ENST00000587880 IFNLR1Q8IU57 520 aaPredicted RBP9.65□□□□□ -0.86
BECN1-207ENST00000587880 UBTFP17480 764 aaKnown RBP9.63□□□□□ -0.87
BECN1-207ENST00000587880 ATAD2BQ9ULI0 1458 aa9.59□□□□□ -0.87
BECN1-207ENST00000587880 RAPGEF2Q9Y4G8 1499 aa9.59□□□□□ -0.87
BECN1-207ENST00000587880 REM2Q8IYK8 340 aaPredicted RBP9.58□□□□□ -0.88
BECN1-207ENST00000587880 PLCD3Q8N3E9 789 aa9.58□□□□□ -0.88
BECN1-207ENST00000587880 SPDYE1Q8NFV5 336 aaPredicted RBP9.58□□□□□ -0.88
BECN1-207ENST00000587880 CUX2O14529 1486 aa9.58□□□□□ -0.88
BECN1-207ENST00000587880 MIER1Q8N108 512 aa9.57□□□□□ -0.88
BECN1-207ENST00000587880 KLHL34Q8N239 644 aa9.55□□□□□ -0.88
BECN1-207ENST00000587880 TTBK1Q5TCY1 1321 aaPredicted RBP9.55□□□□□ -0.88
BECN1-207ENST00000587880 PRXQ9BXM0 1461 aa9.54□□□□□ -0.88
BECN1-207ENST00000587880 CLEC11AQ9Y240 323 aa9.54□□□□□ -0.88
BECN1-207ENST00000587880 ARAP1Q96P48 1450 aa9.53□□□□□ -0.88
BECN1-207ENST00000587880 RRBP1Q9P2E9 1410 aaKnown RBP9.53□□□□□ -0.88
BECN1-207ENST00000587880 PRDM2Q13029 1718 aa9.53□□□□□ -0.88
BECN1-207ENST00000587880 HMGXB3Q12766 1538 aa9.51□□□□□ -0.89
BECN1-207ENST00000587880 DHX57Q6P158 1386 aaKnown RBP9.51□□□□□ -0.89
BECN1-207ENST00000587880 PLEKHG5O94827 1062 aa9.5□□□□□ -0.89
BECN1-207ENST00000587880 MAP3K1Q13233 1512 aa9.48□□□□□ -0.89
BECN1-207ENST00000587880 PRR29P0C7W0 189 aa9.48□□□□□ -0.89
BECN1-207ENST00000587880 SPOCK2Q92563 424 aa9.48□□□□□ -0.89
BECN1-207ENST00000587880 PITPNM1O00562 1244 aa9.47□□□□□ -0.89
BECN1-207ENST00000587880 YTHDC1Q96MU7 727 aaKnown RBP9.46□□□□□ -0.9
BECN1-207ENST00000587880 ZBTB47Q9UFB7 747 aaPredicted RBP9.44□□□□□ -0.9
BECN1-207ENST00000587880 CUX1P39880 1505 aa9.44□□□□□ -0.9
BECN1-207ENST00000587880 CFAP43Q8NDM7 1665 aa9.43□□□□□ -0.9
BECN1-207ENST00000587880 KIF27Q86VH2 1401 aa9.43□□□□□ -0.9
BECN1-207ENST00000587880 TIAM1Q13009 1591 aa9.41□□□□□ -0.9
BECN1-207ENST00000587880 NCAPD3P42695 1498 aa9.4□□□□□ -0.9
BECN1-207ENST00000587880 ARHGAP35Q9NRY4 1499 aa9.4□□□□□ -0.9
BECN1-207ENST00000587880 CCNB3Q8WWL7 1395 aa9.4□□□□□ -0.9
BECN1-207ENST00000587880 PKD2Q13563 968 aa9.4□□□□□ -0.9
BECN1-207ENST00000587880 CREBZFQ9NS37 354 aa9.4□□□□□ -0.9
BECN1-207ENST00000587880 MAPKBP1O60336 1514 aa9.38□□□□□ -0.91
BECN1-207ENST00000587880 CFTRP13569 1480 aa9.37□□□□□ -0.91
BECN1-207ENST00000587880 SUPT16HQ9Y5B9 1047 aaKnown RBP9.37□□□□□ -0.91
BECN1-207ENST00000587880 MNX1P50219 401 aaPredicted RBP9.33□□□□□ -0.92
BECN1-207ENST00000587880 KANK4Q5T7N3 995 aaPredicted RBP9.32□□□□□ -0.92
BECN1-207ENST00000587880 CIZ1Q9ULV3 898 aaPredicted RBP9.32□□□□□ -0.92
BECN1-207ENST00000587880 LRRC9Q6ZRR7 1453 aa9.32□□□□□ -0.92
BECN1-207ENST00000587880 RAB3GAP2Q9H2M9 1393 aa9.31□□□□□ -0.92
BECN1-207ENST00000587880 EFCAB5A4FU69 1503 aa9.31□□□□□ -0.92
BECN1-207ENST00000587880 FHAD1B1AJZ9 1412 aa9.31□□□□□ -0.92
BECN1-207ENST00000587880 SETD5Q9C0A6 1442 aa9.31□□□□□ -0.92
BECN1-207ENST00000587880 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.3□□□□□ -0.92
BECN1-207ENST00000587880 ECM2O94769 699 aaPredicted RBP9.3□□□□□ -0.92
BECN1-207ENST00000587880 NUBP1P53384 320 aa9.3□□□□□ -0.92
BECN1-207ENST00000587880 TIMELESSQ9UNS1 1208 aa9.3□□□□□ -0.92
BECN1-207ENST00000587880 PCF11O94913 1555 aaKnown RBP9.29□□□□□ -0.92
BECN1-207ENST00000587880 CHADLQ6NUI6 762 aa9.29□□□□□ -0.92
BECN1-207ENST00000587880 AQRO60306 1485 aaKnown RBP eCLIP9.28□□□□□ -0.92
BECN1-207ENST00000587880 FYCO1Q9BQS8 1478 aa9.28□□□□□ -0.92
BECN1-207ENST00000587880 CC2D2AQ9P2K1 1620 aa9.27□□□□□ -0.92
BECN1-207ENST00000587880 CTTNBP2Q8WZ74 1663 aa9.27□□□□□ -0.93
BECN1-207ENST00000587880 WDR97A6NE52 1622 aa9.27□□□□□ -0.93
BECN1-207ENST00000587880 CHRDL2Q6WN34 429 aa9.26□□□□□ -0.93
BECN1-207ENST00000587880 TSHZ2Q9NRE2 1034 aa9.26□□□□□ -0.93
BECN1-207ENST00000587880 CUL7Q14999 1698 aa9.26□□□□□ -0.93
BECN1-207ENST00000587880 FXR2P51116 673 aaKnown RBP eCLIP9.25□□□□□ -0.93
BECN1-207ENST00000587880 NPM1P06748 294 aaKnown RBP eCLIP9.24□□□□□ -0.93
BECN1-207ENST00000587880 PRKAR2AP13861 404 aaKnown RBP9.24□□□□□ -0.93
BECN1-207ENST00000587880 GSE1Q14687 1217 aa9.24□□□□□ -0.93
BECN1-207ENST00000587880 IGF1RP08069 1367 aa9.24□□□□□ -0.93
BECN1-207ENST00000587880 KIF21AQ7Z4S6 1674 aa9.23□□□□□ -0.93
BECN1-207ENST00000587880 FGD5Q6ZNL6 1462 aa9.23□□□□□ -0.93
BECN1-207ENST00000587880 CCER2I3L3R5 266 aa9.23□□□□□ -0.93
BECN1-207ENST00000587880 DCAF8Q5TAQ9 597 aa9.23□□□□□ -0.93
BECN1-207ENST00000587880 THOC2Q8NI27 1593 aaKnown RBP9.22□□□□□ -0.93
BECN1-207ENST00000587880 RANGAP1P46060 587 aaPredicted RBP9.22□□□□□ -0.93
BECN1-207ENST00000587880 FAM212AQ96EL1 285 aa9.22□□□□□ -0.93
BECN1-207ENST00000587880 ANP32EQ9BTT0 268 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms