RNA–Protein interactions for RNA: ENST00000587880.1

BECN1-207, Transcript of beclin 1, humanhuman

TSL 3

Gene BECN1, Length 524 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BECN1-207ENST00000587880 AEBP2Q6ZN18 517 aaPredicted RBP17.32■□□□□ 0.36
BECN1-207ENST00000587880 CHIC1Q5VXU3 224 aa17.1■□□□□ 0.33
BECN1-207ENST00000587880 PHF23Q9BUL5 403 aaPredicted RBP15.08■□□□□ 0
BECN1-207ENST00000587880 SENP3Q9H4L4 574 aaPredicted RBP14.64□□□□□ -0.07
BECN1-207ENST00000587880 PLPPR3Q6T4P5 718 aa13.98□□□□□ -0.17
BECN1-207ENST00000587880 FOXD1Q16676 465 aa13.59□□□□□ -0.23
BECN1-207ENST00000587880 ADRA2BP18089 450 aa13.25□□□□□ -0.29
BECN1-207ENST00000587880 PPP6R1Q9UPN7 881 aa13.25□□□□□ -0.29
BECN1-207ENST00000587880 NISCHQ9Y2I1 1504 aa13.08□□□□□ -0.31
BECN1-207ENST00000587880 PIAS4Q8N2W9 510 aaPredicted RBP12.86□□□□□ -0.35
BECN1-207ENST00000587880 MSH5O43196 834 aa12.42□□□□□ -0.42
BECN1-207ENST00000587880 PPP4R3CPQ6ZMV5 832 aa12.35□□□□□ -0.43
BECN1-207ENST00000587880 KCNA4P22459 653 aa12.31□□□□□ -0.44
BECN1-207ENST00000587880 SCAF1Q9H7N4 1312 aaKnown RBP12.1□□□□□ -0.47
BECN1-207ENST00000587880 NCBP3Q53F19 620 aaKnown RBP12.08□□□□□ -0.48
BECN1-207ENST00000587880 MAPK8IP2Q13387 824 aaPredicted RBP11.96□□□□□ -0.49
BECN1-207ENST00000587880 CNKSR2Q8WXI2 1034 aa11.95□□□□□ -0.5
BECN1-207ENST00000587880 NPM3O75607 178 aaKnown RBP11.91□□□□□ -0.5
BECN1-207ENST00000587880 SLC4A1APQ9BWU0 796 aaKnown RBP11.75□□□□□ -0.53
BECN1-207ENST00000587880 DMRT2Q9Y5R5 561 aa11.72□□□□□ -0.53
BECN1-207ENST00000587880 EHMT2Q96KQ7 1210 aa11.67□□□□□ -0.54
BECN1-207ENST00000587880 RNF216Q9NWF9 866 aaPredicted RBP11.66□□□□□ -0.54
BECN1-207ENST00000587880 HOXD11P31277 338 aaPredicted RBP11.56□□□□□ -0.56
BECN1-207ENST00000587880 DNAJC5BQ9UF47 199 aa11.51□□□□□ -0.57
BECN1-207ENST00000587880 CSRNP3Q8WYN3 585 aa11.44□□□□□ -0.58
BECN1-207ENST00000587880 ZBTB22O15209 634 aa11.33□□□□□ -0.6
BECN1-207ENST00000587880 FOXD4L1Q9NU39 408 aa11.26□□□□□ -0.61
BECN1-207ENST00000587880 CCDC180Q9P1Z9 1646 aa11.24□□□□□ -0.61
BECN1-207ENST00000587880 DCAF8L1A6NGE4 600 aa11.23□□□□□ -0.61
BECN1-207ENST00000587880 SLC4A2P04920 1241 aa11.2□□□□□ -0.62
BECN1-207ENST00000587880 ZCCHC6Q5VYS8 1495 aaKnown RBP11.16□□□□□ -0.62
BECN1-207ENST00000587880 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.03□□□□□ -0.64
BECN1-207ENST00000587880 MYCNP04198 464 aaPredicted RBP10.99□□□□□ -0.65
BECN1-207ENST00000587880 SHROOM4Q9ULL8 1493 aa10.99□□□□□ -0.65
BECN1-207ENST00000587880 POTEDQ86YR6 584 aa10.97□□□□□ -0.65
BECN1-207ENST00000587880 DCAF1Q9Y4B6 1507 aa10.89□□□□□ -0.67
BECN1-207ENST00000587880 U3KPZ7 1027 aaPredicted RBP10.87□□□□□ -0.67
BECN1-207ENST00000587880 SUPT5HO00267 1087 aaKnown RBP10.84□□□□□ -0.67
BECN1-207ENST00000587880 ATXN8OSP0DMR3 200 aa10.83□□□□□ -0.68
BECN1-207ENST00000587880 MYO15BQ96JP2 1530 aa10.82□□□□□ -0.68
BECN1-207ENST00000587880 HRCP23327 699 aa10.8□□□□□ -0.68
BECN1-207ENST00000587880 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.79□□□□□ -0.68
BECN1-207ENST00000587880 HNRNPUL2Q1KMD3 747 aaKnown RBP10.79□□□□□ -0.68
BECN1-207ENST00000587880 SAMD1Q6SPF0 538 aaPredicted RBP10.77□□□□□ -0.69
BECN1-207ENST00000587880 ATF5Q9Y2D1 282 aaPredicted RBP10.71□□□□□ -0.69
BECN1-207ENST00000587880 RNF39Q9H2S5 420 aa10.68□□□□□ -0.7
BECN1-207ENST00000587880 APLP2Q06481 763 aa10.62□□□□□ -0.71
BECN1-207ENST00000587880 ABCC9O60706 1549 aa10.61□□□□□ -0.71
BECN1-207ENST00000587880 C1QBPQ07021 282 aaKnown RBP10.55□□□□□ -0.72
BECN1-207ENST00000587880 SPINK5Q9NQ38 1064 aaPredicted RBP10.53□□□□□ -0.72
BECN1-207ENST00000587880 PCGF6Q9BYE7 350 aa10.52□□□□□ -0.73
BECN1-207ENST00000587880 ZNF219Q9P2Y4 722 aaPredicted RBP10.5□□□□□ -0.73
BECN1-207ENST00000587880 CAPN15O75808 1086 aa10.47□□□□□ -0.73
BECN1-207ENST00000587880 TRHP20396 242 aaPredicted RBP10.47□□□□□ -0.73
BECN1-207ENST00000587880 TRIM26Q12899 539 aaPredicted RBP10.41□□□□□ -0.74
BECN1-207ENST00000587880 DCAF8L2P0C7V8 631 aa10.39□□□□□ -0.75
BECN1-207ENST00000587880 RB1CC1Q8TDY2 1594 aa10.39□□□□□ -0.75
BECN1-207ENST00000587880 ZEB1P37275 1124 aaPredicted RBP10.37□□□□□ -0.75
BECN1-207ENST00000587880 RSF1Q96T23 1441 aaPredicted RBP10.35□□□□□ -0.75
BECN1-207ENST00000587880 PPARGC1BQ86YN6 1023 aaKnown RBP10.35□□□□□ -0.75
BECN1-207ENST00000587880 POLA2Q14181 598 aa10.34□□□□□ -0.75
BECN1-207ENST00000587880 FKBP8Q14318 412 aa10.33□□□□□ -0.76
BECN1-207ENST00000587880 SCRIBQ14160 1630 aa10.33□□□□□ -0.76
BECN1-207ENST00000587880 LOC105371045A0A1W2PR82 267 aa10.31□□□□□ -0.76
BECN1-207ENST00000587880 ABCB7O75027 752 aa10.29□□□□□ -0.76
BECN1-207ENST00000587880 CACNB1Q02641 598 aaPredicted RBP10.25□□□□□ -0.77
BECN1-207ENST00000587880 PELP1Q8IZL8 1130 aaKnown RBP10.25□□□□□ -0.77
BECN1-207ENST00000587880 NACADO15069 1562 aa10.24□□□□□ -0.77
BECN1-207ENST00000587880 DSG3P32926 999 aa10.24□□□□□ -0.77
BECN1-207ENST00000587880 MKRN4PQ13434 485 aaPredicted RBP10.24□□□□□ -0.77
BECN1-207ENST00000587880 FBLN2P98095 1184 aa10.22□□□□□ -0.77
BECN1-207ENST00000587880 EIF4G1Q04637 1599 aaKnown RBP10.2□□□□□ -0.78
BECN1-207ENST00000587880 TRIM41Q8WV44 630 aa10.18□□□□□ -0.78
BECN1-207ENST00000587880 BAZ1AQ9NRL2 1556 aaPredicted RBP10.18□□□□□ -0.78
BECN1-207ENST00000587880 ZBTB12Q9Y330 459 aaPredicted RBP10.16□□□□□ -0.78
BECN1-207ENST00000587880 MROH2BQ7Z745 1585 aa10.12□□□□□ -0.79
BECN1-207ENST00000587880 SPDYE4A6NLX3 237 aa10.11□□□□□ -0.79
BECN1-207ENST00000587880 WIZO95785 1651 aa10.09□□□□□ -0.79
BECN1-207ENST00000587880 CECR2Q9BXF3 1484 aa10.07□□□□□ -0.8
BECN1-207ENST00000587880 WRNQ14191 1432 aaPredicted RBP eCLIP10.06□□□□□ -0.8
BECN1-207ENST00000587880 TOP2AP11388 1531 aaKnown RBP10.04□□□□□ -0.8
BECN1-207ENST00000587880 OSCARQ8IYS5 282 aa9.99□□□□□ -0.81
BECN1-207ENST00000587880 EEA1Q15075 1411 aa9.98□□□□□ -0.81
BECN1-207ENST00000587880 SMARCA4P51532 1647 aa9.97□□□□□ -0.81
BECN1-207ENST00000587880 FAM9AQ8IZU1 332 aaPredicted RBP9.96□□□□□ -0.82
BECN1-207ENST00000587880 PROM2Q8N271 834 aa9.96□□□□□ -0.82
BECN1-207ENST00000587880 SMARCA2P51531 1590 aa9.96□□□□□ -0.82
BECN1-207ENST00000587880 ZNF692Q9BU19 519 aaPredicted RBP9.93□□□□□ -0.82
BECN1-207ENST00000587880 SPDYE2BA6NHP3 402 aa9.92□□□□□ -0.82
BECN1-207ENST00000587880 SPDYE6P0CI01 402 aa9.92□□□□□ -0.82
BECN1-207ENST00000587880 SPDYE2Q495Y8 402 aa9.92□□□□□ -0.82
BECN1-207ENST00000587880 CEP162Q5TB80 1403 aa9.9□□□□□ -0.82
BECN1-207ENST00000587880 TNIKQ9UKE5 1360 aa9.9□□□□□ -0.82
BECN1-207ENST00000587880 UNC13AQ9UPW8 1703 aa9.9□□□□□ -0.83
BECN1-207ENST00000587880 ACIN1Q9UKV3 1341 aaKnown RBP9.89□□□□□ -0.83
BECN1-207ENST00000587880 ABCC8Q09428 1581 aa9.88□□□□□ -0.83
BECN1-207ENST00000587880 FBXO3Q9UK99 471 aa9.88□□□□□ -0.83
BECN1-207ENST00000587880 CCDC88BA6NC98 1476 aa9.87□□□□□ -0.83
BECN1-207ENST00000587880 CENPBP07199 599 aaPredicted RBP9.86□□□□□ -0.83
BECN1-207ENST00000587880 CCER1Q8TC90 406 aaPredicted RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms