RNA–Protein interactions for RNA: ENST00000587605.5

MBD1-216, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 2 BASIC

Gene MBD1, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-216ENST00000587605 LAMC3Q9Y6N6 1575 aa29.18■■■□□ 2.26
MBD1-216ENST00000587605 LRRC9Q6ZRR7 1453 aa29.16■■■□□ 2.26
MBD1-216ENST00000587605 PELP1Q8IZL8 1130 aaKnown RBP29.14■■■□□ 2.26
MBD1-216ENST00000587605 RAD54L2Q9Y4B4 1467 aa29.1■■■□□ 2.25
MBD1-216ENST00000587605 CTTNBP2Q8WZ74 1663 aa29.09■■■□□ 2.25
MBD1-216ENST00000587605 AQRO60306 1485 aaKnown RBP eCLIP29.09■■■□□ 2.256e-7■■■□□ 18.9
MBD1-216ENST00000587605 WDR97A6NE52 1622 aa29.09■■■□□ 2.25
MBD1-216ENST00000587605 PCF11O94913 1555 aaKnown RBP29.08■■■□□ 2.25
MBD1-216ENST00000587605 FYCO1Q9BQS8 1478 aa29.07■■■□□ 2.24
MBD1-216ENST00000587605 NESP48681 1621 aa29.04■■■□□ 2.24
MBD1-216ENST00000587605 CASKIN1Q8WXD9 1431 aa29■■■□□ 2.23
MBD1-216ENST00000587605 URB2Q14146 1524 aaKnown RBP28.97■■■□□ 2.23
MBD1-216ENST00000587605 MIER1Q8N108 512 aa28.96■■■□□ 2.23
MBD1-216ENST00000587605 ABCA5Q8WWZ7 1642 aa28.96■■■□□ 2.23
MBD1-216ENST00000587605 SETD5Q9C0A6 1442 aa28.94■■■□□ 2.22
MBD1-216ENST00000587605 PHLDB1Q86UU1 1377 aa28.93■■■□□ 2.22
MBD1-216ENST00000587605 RAB3GAP2Q9H2M9 1393 aa28.93■■■□□ 2.22
MBD1-216ENST00000587605 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.93■■■□□ 2.22
MBD1-216ENST00000587605 FMN1Q68DA7 1419 aa28.93■■■□□ 2.22
MBD1-216ENST00000587605 PDS5BQ9NTI5 1447 aa28.93■■■□□ 2.22
MBD1-216ENST00000587605 FHOD3Q2V2M9 1422 aa28.92■■■□□ 2.22
MBD1-216ENST00000587605 GTF3C3Q9Y5Q9 886 aa28.91■■■□□ 2.22
MBD1-216ENST00000587605 SAMD9Q5K651 1589 aa28.84■■■□□ 2.21
MBD1-216ENST00000587605 MAPKBP1O60336 1514 aa28.84■■■□□ 2.21
MBD1-216ENST00000587605 ITGAEP38570 1179 aa28.84■■■□□ 2.21
MBD1-216ENST00000587605 GAPVD1Q14C86 1478 aa28.83■■■□□ 2.21
MBD1-216ENST00000587605 THOC2Q8NI27 1593 aaKnown RBP28.8■■■□□ 2.2
MBD1-216ENST00000587605 SNAPC4Q5SXM2 1469 aa28.79■■■□□ 2.2
MBD1-216ENST00000587605 P3H3Q8IVL6 736 aa28.79■■■□□ 2.2
MBD1-216ENST00000587605 KIF21AQ7Z4S6 1674 aa28.77■■■□□ 2.2
MBD1-216ENST00000587605 FAM50AQ14320 339 aaKnown RBP28.74■■■□□ 2.19
MBD1-216ENST00000587605 YTHDC1Q96MU7 727 aaKnown RBP28.71■■■□□ 2.19
MBD1-216ENST00000587605 ATP1B4Q9UN42 357 aaPredicted RBP28.71■■■□□ 2.19
MBD1-216ENST00000587605 TDRD9Q8NDG6 1382 aaKnown RBP28.7■■■□□ 2.18
MBD1-216ENST00000587605 TIMELESSQ9UNS1 1208 aa28.7■■■□□ 2.18
MBD1-216ENST00000587605 TARBP1Q13395 1621 aaKnown RBP28.69■■■□□ 2.18
MBD1-216ENST00000587605 FGD6Q6ZV73 1430 aa28.68■■■□□ 2.18
MBD1-216ENST00000587605 GRIN2BQ13224 1484 aa28.66■■■□□ 2.18
MBD1-216ENST00000587605 MTUS2Q5JR59 1369 aa28.63■■■□□ 2.17
MBD1-216ENST00000587605 EHBP1L1Q8N3D4 1523 aa28.61■■■□□ 2.17
MBD1-216ENST00000587605 SUPT6HQ7KZ85 1726 aaKnown RBP28.59■■■□□ 2.17
MBD1-216ENST00000587605 LRRIQ1Q96JM4 1722 aa28.59■■■□□ 2.17
MBD1-216ENST00000587605 PBRM1Q86U86 1689 aa28.59■■■□□ 2.17
MBD1-216ENST00000587605 CCDC18Q5T9S5 1454 aa28.57■■■□□ 2.16
MBD1-216ENST00000587605 MYOM3Q5VTT5 1437 aa28.53■■■□□ 2.16
MBD1-216ENST00000587605 NCOA2Q15596 1464 aa28.52■■■□□ 2.16
MBD1-216ENST00000587605 HFM1A2PYH4 1435 aa28.52■■■□□ 2.16
MBD1-216ENST00000587605 ADAMTS12P58397 1594 aa28.49■■■□□ 2.15
MBD1-216ENST00000587605 HECW1Q76N89 1606 aa28.49■■■□□ 2.15
MBD1-216ENST00000587605 ARHGEF11O15085 1522 aa28.49■■■□□ 2.15
MBD1-216ENST00000587605 MRC2Q9UBG0 1479 aa28.48■■■□□ 2.15
MBD1-216ENST00000587605 IQGAP2Q13576 1575 aa28.47■■■□□ 2.15
MBD1-216ENST00000587605 UGGT2Q9NYU1 1516 aa28.47■■■□□ 2.15
MBD1-216ENST00000587605 PTPN23Q9H3S7 1636 aa28.46■■■□□ 2.15
MBD1-216ENST00000587605 UACAQ9BZF9 1416 aa28.44■■■□□ 2.14
MBD1-216ENST00000587605 SIN3AQ96ST3 1273 aa28.39■■■□□ 2.14
MBD1-216ENST00000587605 TCOF1Q13428 1488 aaKnown RBP28.39■■■□□ 2.13
MBD1-216ENST00000587605 PTPRKQ15262 1439 aa28.36■■■□□ 2.13
MBD1-216ENST00000587605 NAIPQ13075 1403 aa28.36■■■□□ 2.13
MBD1-216ENST00000587605 DNAJC5BQ9UF47 199 aa28.35■■■□□ 2.13
MBD1-216ENST00000587605 PPP1R15AO75807 674 aaPredicted RBP28.34■■■□□ 2.13
MBD1-216ENST00000587605 IFT140Q96RY7 1462 aa28.34■■■□□ 2.13
MBD1-216ENST00000587605 AKNAQ7Z591 1439 aa28.33■■■□□ 2.13
MBD1-216ENST00000587605 MAGI3Q5TCQ9 1506 aa28.32■■■□□ 2.12
MBD1-216ENST00000587605 EPRSP07814 1512 aaKnown RBP28.31■■■□□ 2.12
MBD1-216ENST00000587605 WDR62O43379 1518 aa28.3■■■□□ 2.12
MBD1-216ENST00000587605 GCC2Q8IWJ2 1684 aa28.3■■■□□ 2.12
MBD1-216ENST00000587605 MIA2Q96PC5 1412 aa28.29■■■□□ 2.12
MBD1-216ENST00000587605 TONSLQ96HA7 1378 aa28.28■■■□□ 2.12
MBD1-216ENST00000587605 KIAA0586Q9BVV6 1533 aa28.2■■■□□ 2.11
MBD1-216ENST00000587605 KIAA0556O60303 1618 aa28.16■■■□□ 2.1
MBD1-216ENST00000587605 CDK13Q14004 1512 aaKnown RBP28.14■■■□□ 2.1
MBD1-216ENST00000587605 DDX10Q13206 875 aaKnown RBP28.12■■■□□ 2.09
MBD1-216ENST00000587605 ZNF608Q9ULD9 1512 aaPredicted RBP28.1■■■□□ 2.09
MBD1-216ENST00000587605 DISP1Q96F81 1524 aa28.09■■■□□ 2.09
MBD1-216ENST00000587605 GRIN2AQ12879 1464 aa28.08■■■□□ 2.09
MBD1-216ENST00000587605 CCER2I3L3R5 266 aa28.08■■■□□ 2.09
MBD1-216ENST00000587605 EIF4G3O43432 1585 aaKnown RBP28.06■■■□□ 2.08
MBD1-216ENST00000587605 KDM5BQ9UGL1 1544 aa28.06■■■□□ 2.08
MBD1-216ENST00000587605 RAPGEF6Q8TEU7 1601 aa28.06■■■□□ 2.08
MBD1-216ENST00000587605 ROCK1Q13464 1354 aa28.06■■■□□ 2.08
MBD1-216ENST00000587605 MAGI1Q96QZ7 1491 aaPredicted RBP28.03■■■□□ 2.08
MBD1-216ENST00000587605 DNMT1P26358 1616 aaKnown RBP28.01■■■□□ 2.07
MBD1-216ENST00000587605 RRP7BPQ9NSQ0 103 aa28■■■□□ 2.07
MBD1-216ENST00000587605 ANP32CO43423 234 aa28■■■□□ 2.07
MBD1-216ENST00000587605 NUP153P49790 1475 aaKnown RBP28■■■□□ 2.07
MBD1-216ENST00000587605 CDK11AQ9UQ88 783 aaPredicted RBP27.99■■■□□ 2.07
MBD1-216ENST00000587605 SUPT16HQ9Y5B9 1047 aaKnown RBP27.99■■■□□ 2.07
MBD1-216ENST00000587605 DAPK1P53355 1430 aa27.97■■■□□ 2.07
MBD1-216ENST00000587605 DENND4BO75064 1496 aaPredicted RBP27.96■■■□□ 2.07
MBD1-216ENST00000587605 KDM6BO15054 1643 aa27.95■■■□□ 2.06
MBD1-216ENST00000587605 CHIC2Q9UKJ5 165 aa27.94■■■□□ 2.06
MBD1-216ENST00000587605 TRIM52Q96A61 297 aa27.92■■■□□ 2.06
MBD1-216ENST00000587605 KCNH8Q96L42 1107 aa27.92■■■□□ 2.06
MBD1-216ENST00000587605 SYNJ2O15056 1496 aa27.91■■■□□ 2.06
MBD1-216ENST00000587605 ITSN2Q9NZM3 1697 aa27.91■■■□□ 2.06
MBD1-216ENST00000587605 MPHOSPH9Q99550 1183 aa27.89■■■□□ 2.06
MBD1-216ENST00000587605 ABCC5O15440 1437 aa27.89■■■□□ 2.06
MBD1-216ENST00000587605 TROQ12816 1431 aaPredicted RBP27.88■■■□□ 2.05
MBD1-216ENST00000587605 ADCY10Q96PN6 1610 aa27.88■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms