RNA–Protein interactions for RNA: ENST00000587525.5

CACNA1A-209, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 1 (best)

Gene CACNA1A, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-209ENST00000587525 MYT1LQ9UL68 1186 aa19.18■□□□□ 0.66
CACNA1A-209ENST00000587525 FOXD1Q16676 465 aa19.16■□□□□ 0.66
CACNA1A-209ENST00000587525 TSHZ2Q9NRE2 1034 aa19.16■□□□□ 0.66
CACNA1A-209ENST00000587525 CCNB3Q8WWL7 1395 aa19.13■□□□□ 0.65
CACNA1A-209ENST00000587525 MTUS2Q5JR59 1369 aa19.1■□□□□ 0.65
CACNA1A-209ENST00000587525 NCAPD3P42695 1498 aa19.1■□□□□ 0.65
CACNA1A-209ENST00000587525 KIF27Q86VH2 1401 aa19.1■□□□□ 0.65
CACNA1A-209ENST00000587525 KDM2AQ9Y2K7 1162 aa19.07■□□□□ 0.64
CACNA1A-209ENST00000587525 RAB3GAP2Q9H2M9 1393 aa19.06■□□□□ 0.64
CACNA1A-209ENST00000587525 CUX2O14529 1486 aa19.06■□□□□ 0.64
CACNA1A-209ENST00000587525 NBR1Q14596 966 aa19.06■□□□□ 0.64
CACNA1A-209ENST00000587525 DHX57Q6P158 1386 aaKnown RBP19.06■□□□□ 0.64
CACNA1A-209ENST00000587525 CDK11AQ9UQ88 783 aaPredicted RBP19.05■□□□□ 0.64
CACNA1A-209ENST00000587525 MRS2Q9HD23 443 aa19.01■□□□□ 0.63
CACNA1A-209ENST00000587525 CC2D2AQ9P2K1 1620 aa19.01■□□□□ 0.63
CACNA1A-209ENST00000587525 CARMIL1Q5VZK9 1371 aa19■□□□□ 0.63
CACNA1A-209ENST00000587525 SLC4A1APQ9BWU0 796 aaKnown RBP18.99■□□□□ 0.63
CACNA1A-209ENST00000587525 DNAJC5BQ9UF47 199 aa18.97■□□□□ 0.63
CACNA1A-209ENST00000587525 NPM2Q86SE8 214 aaKnown RBP18.97■□□□□ 0.63
CACNA1A-209ENST00000587525 SENP3Q9H4L4 574 aaPredicted RBP18.96■□□□□ 0.63
CACNA1A-209ENST00000587525 PEG3Q9GZU2 1588 aa18.96■□□□□ 0.63
CACNA1A-209ENST00000587525 CADPSQ9ULU8 1353 aa18.95■□□□□ 0.62
CACNA1A-209ENST00000587525 RBM19Q9Y4C8 960 aaKnown RBP18.94■□□□□ 0.62
CACNA1A-209ENST00000587525 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.92■□□□□ 0.62
CACNA1A-209ENST00000587525 TDRD9Q8NDG6 1382 aaKnown RBP18.91■□□□□ 0.62
CACNA1A-209ENST00000587525 HMGXB3Q12766 1538 aa18.9■□□□□ 0.62
CACNA1A-209ENST00000587525 SYNJ1O43426 1573 aa18.89■□□□□ 0.61
CACNA1A-209ENST00000587525 FHOD3Q2V2M9 1422 aa18.88■□□□□ 0.61
CACNA1A-209ENST00000587525 B4GALNT3Q6L9W6 998 aa18.88■□□□□ 0.61
CACNA1A-209ENST00000587525 EIF4G2P78344 907 aaKnown RBP eCLIP18.86■□□□□ 0.61
CACNA1A-209ENST00000587525 RTL5Q5HYW3 569 aaPredicted RBP18.86■□□□□ 0.61
CACNA1A-209ENST00000587525 RGL3Q3MIN7 710 aa18.85■□□□□ 0.61
CACNA1A-209ENST00000587525 SETD5Q9C0A6 1442 aa18.85■□□□□ 0.61
CACNA1A-209ENST00000587525 KIF21BO75037 1637 aa18.82■□□□□ 0.6
CACNA1A-209ENST00000587525 PPP1R15AO75807 674 aaPredicted RBP18.82■□□□□ 0.6
CACNA1A-209ENST00000587525 ARAP1Q96P48 1450 aa18.81■□□□□ 0.6
CACNA1A-209ENST00000587525 HSPA5P11021 654 aaKnown RBP18.81■□□□□ 0.6
CACNA1A-209ENST00000587525 CLSPNQ9HAW4 1339 aa18.8■□□□□ 0.6
CACNA1A-209ENST00000587525 RTN4Q9NQC3 1192 aaKnown RBP18.79■□□□□ 0.6
CACNA1A-209ENST00000587525 NESP48681 1621 aa18.78■□□□□ 0.6
CACNA1A-209ENST00000587525 TMC1Q8TDI8 760 aa18.77■□□□□ 0.6
CACNA1A-209ENST00000587525 CFTRP13569 1480 aa18.76■□□□□ 0.59
CACNA1A-209ENST00000587525 PHLDB1Q86UU1 1377 aa18.74■□□□□ 0.59
CACNA1A-209ENST00000587525 FANCD2Q9BXW9 1451 aa18.74■□□□□ 0.59
CACNA1A-209ENST00000587525 CCDC136Q96JN2 1154 aa18.73■□□□□ 0.59
CACNA1A-209ENST00000587525 IGF1RP08069 1367 aa18.72■□□□□ 0.59
CACNA1A-209ENST00000587525 L3MBTL2Q969R5 705 aa18.69■□□□□ 0.58
CACNA1A-209ENST00000587525 CHMP7Q8WUX9 453 aaPredicted RBP18.69■□□□□ 0.58
CACNA1A-209ENST00000587525 PDS5BQ9NTI5 1447 aa18.68■□□□□ 0.58
CACNA1A-209ENST00000587525 DAXXQ9UER7 740 aaPredicted RBP18.67■□□□□ 0.58
CACNA1A-209ENST00000587525 CFDP1Q9UEE9 299 aaPredicted RBP18.66■□□□□ 0.58
CACNA1A-209ENST00000587525 RAD54L2Q9Y4B4 1467 aa18.65■□□□□ 0.58
CACNA1A-209ENST00000587525 EIF5BO60841 1220 aaKnown RBP18.64■□□□□ 0.57
CACNA1A-209ENST00000587525 ERCC6Q03468 1493 aa18.64■□□□□ 0.57
CACNA1A-209ENST00000587525 MPHOSPH9Q99550 1183 aa18.62■□□□□ 0.57
CACNA1A-209ENST00000587525 ARHGAP35Q9NRY4 1499 aa18.62■□□□□ 0.57
CACNA1A-209ENST00000587525 ZNF644Q9H582 1327 aaPredicted RBP18.6■□□□□ 0.57
CACNA1A-209ENST00000587525 FHAD1B1AJZ9 1412 aa18.6■□□□□ 0.57
CACNA1A-209ENST00000587525 CCDC184Q52MB2 194 aa18.6■□□□□ 0.57
CACNA1A-209ENST00000587525 CHGAP10645 457 aaKnown RBP18.59■□□□□ 0.57
CACNA1A-209ENST00000587525 DEKP35659 375 aaKnown RBP18.59■□□□□ 0.57
CACNA1A-209ENST00000587525 CUX1P39880 1505 aa18.59■□□□□ 0.57
CACNA1A-209ENST00000587525 TSPY4P0CV99 314 aa18.58■□□□□ 0.56
CACNA1A-209ENST00000587525 TSPY10P0CW01 314 aa18.58■□□□□ 0.56
CACNA1A-209ENST00000587525 CARD11Q9BXL7 1154 aa18.58■□□□□ 0.56
CACNA1A-209ENST00000587525 FGD5Q6ZNL6 1462 aa18.57■□□□□ 0.56
CACNA1A-209ENST00000587525 ANP32AP39687 249 aaKnown RBP18.57■□□□□ 0.56
CACNA1A-209ENST00000587525 CC2D1BQ5T0F9 858 aaKnown RBP18.55■□□□□ 0.56
CACNA1A-209ENST00000587525 DCAF11Q8TEB1 546 aa18.55■□□□□ 0.56
CACNA1A-209ENST00000587525 PKD2Q13563 968 aa18.53■□□□□ 0.56
CACNA1A-209ENST00000587525 TOP2BQ02880 1626 aa18.52■□□□□ 0.56
CACNA1A-209ENST00000587525 CCER2I3L3R5 266 aa18.52■□□□□ 0.55
CACNA1A-209ENST00000587525 LAS1LQ9Y4W2 734 aaKnown RBP18.5■□□□□ 0.55
CACNA1A-209ENST00000587525 PRXQ9BXM0 1461 aa18.49■□□□□ 0.55
CACNA1A-209ENST00000587525 ZBTB47Q9UFB7 747 aaPredicted RBP18.49■□□□□ 0.55
CACNA1A-209ENST00000587525 PLEKHD1A6NEE1 506 aa18.46■□□□□ 0.55
CACNA1A-209ENST00000587525 PPP4R2Q9NY27 417 aa18.46■□□□□ 0.55
CACNA1A-209ENST00000587525 ARXQ96QS3 562 aa18.46■□□□□ 0.55
CACNA1A-209ENST00000587525 WDR97A6NE52 1622 aa18.45■□□□□ 0.54
CACNA1A-209ENST00000587525 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.44■□□□□ 0.54
CACNA1A-209ENST00000587525 CANXP27824 592 aaKnown RBP18.43■□□□□ 0.54
CACNA1A-209ENST00000587525 WASHC2AQ641Q2 1341 aa18.43■□□□□ 0.54
CACNA1A-209ENST00000587525 TNNT2P45379 298 aaPredicted RBP18.42■□□□□ 0.54
CACNA1A-209ENST00000587525 LRRC9Q6ZRR7 1453 aa18.42■□□□□ 0.54
CACNA1A-209ENST00000587525 NEUROD2Q15784 382 aa18.41■□□□□ 0.54
CACNA1A-209ENST00000587525 RRBP1Q9P2E9 1410 aaKnown RBP18.41■□□□□ 0.54
CACNA1A-209ENST00000587525 TOPBP1Q92547 1522 aa18.41■□□□□ 0.54
CACNA1A-209ENST00000587525 MSH5O43196 834 aa18.41■□□□□ 0.54
CACNA1A-209ENST00000587525 TIMELESSQ9UNS1 1208 aa18.4■□□□□ 0.54
CACNA1A-209ENST00000587525 HNRNPMP52272 730 aaKnown RBP eCLIP18.39■□□□□ 0.54
CACNA1A-209ENST00000587525 CCDC18Q5T9S5 1454 aa18.39■□□□□ 0.53
CACNA1A-209ENST00000587525 PRKRIP1Q9H875 184 aaPredicted RBP18.39■□□□□ 0.53
CACNA1A-209ENST00000587525 C11orf95C9JLR9 678 aaPredicted RBP18.38■□□□□ 0.53
CACNA1A-209ENST00000587525 NOP58Q9Y2X3 529 aaKnown RBP18.37■□□□□ 0.53
CACNA1A-209ENST00000587525 POLA1P09884 1462 aaPredicted RBP18.37■□□□□ 0.53
CACNA1A-209ENST00000587525 LAMC3Q9Y6N6 1575 aa18.36■□□□□ 0.53
CACNA1A-209ENST00000587525 NBPF8Q3BBV2 869 aa18.35■□□□□ 0.53
CACNA1A-209ENST00000587525 FMN1Q68DA7 1419 aa18.35■□□□□ 0.53
CACNA1A-209ENST00000587525 ST20-MTHFSA0A0A6YYL1 179 aa18.34■□□□□ 0.53
CACNA1A-209ENST00000587525 PLIN1O60240 522 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms