RNA–Protein interactions for RNA: ENST00000587525.5

CACNA1A-209, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 1 (best)

Gene CACNA1A, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-209ENST00000587525 NISCHQ9Y2I1 1504 aa25.65■■□□□ 1.7
CACNA1A-209ENST00000587525 DCAF8L2P0C7V8 631 aa24.33■■□□□ 1.49
CACNA1A-209ENST00000587525 SHROOM4Q9ULL8 1493 aa24.11■■□□□ 1.45
CACNA1A-209ENST00000587525 SUPT5HO00267 1087 aaKnown RBP24.03■■□□□ 1.44
CACNA1A-209ENST00000587525 EHMT2Q96KQ7 1210 aa23.15■■□□□ 1.3
CACNA1A-209ENST00000587525 PCGF6Q9BYE7 350 aa22.75■■□□□ 1.23
CACNA1A-209ENST00000587525 FAM9AQ8IZU1 332 aaPredicted RBP22.59■■□□□ 1.21
CACNA1A-209ENST00000587525 LOC105371045A0A1W2PR82 267 aa22.32■■□□□ 1.16
CACNA1A-209ENST00000587525 TTBK1Q5TCY1 1321 aaPredicted RBP22.3■■□□□ 1.16
CACNA1A-209ENST00000587525 PPARGC1BQ86YN6 1023 aaKnown RBP22.23■■□□□ 1.15
CACNA1A-209ENST00000587525 CHIC1Q5VXU3 224 aa22.2■■□□□ 1.14
CACNA1A-209ENST00000587525 HRCP23327 699 aa21.99■■□□□ 1.11
CACNA1A-209ENST00000587525 TRIM41Q8WV44 630 aa21.88■■□□□ 1.09
CACNA1A-209ENST00000587525 CCDC180Q9P1Z9 1646 aa21.79■■□□□ 1.08
CACNA1A-209ENST00000587525 RANGAP1P46060 587 aaPredicted RBP21.73■■□□□ 1.07
CACNA1A-209ENST00000587525 ABCC9O60706 1549 aa21.57■■□□□ 1.04
CACNA1A-209ENST00000587525 MYO15BQ96JP2 1530 aa21.51■■□□□ 1.03
CACNA1A-209ENST00000587525 TRIM26Q12899 539 aaPredicted RBP21.47■■□□□ 1.03
CACNA1A-209ENST00000587525 ZCCHC6Q5VYS8 1495 aaKnown RBP21.43■■□□□ 1.02
CACNA1A-209ENST00000587525 CCER1Q8TC90 406 aaPredicted RBP21.43■■□□□ 1.02
CACNA1A-209ENST00000587525 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.3■■□□□ 1
CACNA1A-209ENST00000587525 UBTFP17480 764 aaKnown RBP21.27■■□□□ 1
CACNA1A-209ENST00000587525 YTHDC1Q96MU7 727 aaKnown RBP21.22■□□□□ 0.99
CACNA1A-209ENST00000587525 PELP1Q8IZL8 1130 aaKnown RBP21.09■□□□□ 0.97
CACNA1A-209ENST00000587525 ZEB1P37275 1124 aaPredicted RBP21.04■□□□□ 0.96
CACNA1A-209ENST00000587525 APLP2Q06481 763 aa21.01■□□□□ 0.95
CACNA1A-209ENST00000587525 HNRNPUL2Q1KMD3 747 aaKnown RBP20.99■□□□□ 0.95
CACNA1A-209ENST00000587525 PABPN1Q86U42 306 aaKnown RBP eCLIP20.96■□□□□ 0.95
CACNA1A-209ENST00000587525 SCAF1Q9H7N4 1312 aaKnown RBP20.85■□□□□ 0.93
CACNA1A-209ENST00000587525 SCRIBQ14160 1630 aa20.83■□□□□ 0.92
CACNA1A-209ENST00000587525 ATP1B4Q9UN42 357 aaPredicted RBP20.82■□□□□ 0.92
CACNA1A-209ENST00000587525 ITGAEP38570 1179 aa20.82■□□□□ 0.92
CACNA1A-209ENST00000587525 CENPBP07199 599 aaPredicted RBP20.81■□□□□ 0.92
CACNA1A-209ENST00000587525 DCAF1Q9Y4B6 1507 aa20.74■□□□□ 0.91
CACNA1A-209ENST00000587525 GTF3C3Q9Y5Q9 886 aa20.73■□□□□ 0.91
CACNA1A-209ENST00000587525 DIEXFQ68CQ4 756 aaKnown RBP20.68■□□□□ 0.9
CACNA1A-209ENST00000587525 NACADO15069 1562 aa20.59■□□□□ 0.89
CACNA1A-209ENST00000587525 NEUROD1Q13562 356 aa20.55■□□□□ 0.88
CACNA1A-209ENST00000587525 RB1CC1Q8TDY2 1594 aa20.54■□□□□ 0.88
CACNA1A-209ENST00000587525 RSF1Q96T23 1441 aaPredicted RBP20.52■□□□□ 0.87
CACNA1A-209ENST00000587525 ACIN1Q9UKV3 1341 aaKnown RBP20.47■□□□□ 0.87
CACNA1A-209ENST00000587525 CECR2Q9BXF3 1484 aa20.35■□□□□ 0.85
CACNA1A-209ENST00000587525 CSRNP3Q8WYN3 585 aa20.34■□□□□ 0.85
CACNA1A-209ENST00000587525 CNGB1Q14028 1251 aaPredicted RBP20.3■□□□□ 0.84
CACNA1A-209ENST00000587525 P3H3Q8IVL6 736 aa20.19■□□□□ 0.82
CACNA1A-209ENST00000587525 ZNF316A6NFI3 1004 aaPredicted RBP20.18■□□□□ 0.82
CACNA1A-209ENST00000587525 MYT1Q01538 1121 aa20.17■□□□□ 0.82
CACNA1A-209ENST00000587525 BCANQ96GW7 911 aa20.15■□□□□ 0.82
CACNA1A-209ENST00000587525 FAM50AQ14320 339 aaKnown RBP20.09■□□□□ 0.81
CACNA1A-209ENST00000587525 MIER1Q8N108 512 aa20.09■□□□□ 0.81
CACNA1A-209ENST00000587525 MROH2BQ7Z745 1585 aa20■□□□□ 0.79
CACNA1A-209ENST00000587525 SOGA1O94964 1423 aa20■□□□□ 0.79
CACNA1A-209ENST00000587525 ARID3CA6NKF2 412 aa19.99■□□□□ 0.79
CACNA1A-209ENST00000587525 HIRIP3Q9BW71 556 aaPredicted RBP19.99■□□□□ 0.79
CACNA1A-209ENST00000587525 POLR3GLQ9BT43 218 aa19.94■□□□□ 0.78
CACNA1A-209ENST00000587525 CEP162Q5TB80 1403 aa19.94■□□□□ 0.78
CACNA1A-209ENST00000587525 ABCC8Q09428 1581 aa19.92■□□□□ 0.78
CACNA1A-209ENST00000587525 CCDC88BA6NC98 1476 aa19.86■□□□□ 0.77
CACNA1A-209ENST00000587525 BAZ1AQ9NRL2 1556 aaPredicted RBP19.83■□□□□ 0.77
CACNA1A-209ENST00000587525 NEFLP07196 543 aa19.79■□□□□ 0.76
CACNA1A-209ENST00000587525 WIZO95785 1651 aa19.79■□□□□ 0.76
CACNA1A-209ENST00000587525 ERICH6Q7L0X2 663 aa19.78■□□□□ 0.76
CACNA1A-209ENST00000587525 RUSC2Q8N2Y8 1516 aa19.76■□□□□ 0.75
CACNA1A-209ENST00000587525 DDX10Q13206 875 aaKnown RBP19.75■□□□□ 0.75
CACNA1A-209ENST00000587525 CLIP1P30622 1438 aa19.73■□□□□ 0.75
CACNA1A-209ENST00000587525 SENP3-EIF4A1A0A087X0R7 540 aa19.67■□□□□ 0.74
CACNA1A-209ENST00000587525 TRIM52Q96A61 297 aa19.66■□□□□ 0.74
CACNA1A-209ENST00000587525 WRNQ14191 1432 aaPredicted RBP eCLIP19.64■□□□□ 0.73
CACNA1A-209ENST00000587525 KANK4Q5T7N3 995 aaPredicted RBP19.63■□□□□ 0.73
CACNA1A-209ENST00000587525 UNC13AQ9UPW8 1703 aa19.61■□□□□ 0.73
CACNA1A-209ENST00000587525 TNIKQ9UKE5 1360 aa19.61■□□□□ 0.73
CACNA1A-209ENST00000587525 BICRAQ9NZM4 1560 aa19.6■□□□□ 0.73
CACNA1A-209ENST00000587525 SMARCA4P51532 1647 aa19.6■□□□□ 0.73
CACNA1A-209ENST00000587525 ZNF326Q5BKZ1 582 aaKnown RBP19.59■□□□□ 0.73
CACNA1A-209ENST00000587525 SIN3AQ96ST3 1273 aa19.58■□□□□ 0.72
CACNA1A-209ENST00000587525 BAZ1BQ9UIG0 1483 aaKnown RBP19.56■□□□□ 0.72
CACNA1A-209ENST00000587525 CHIC2Q9UKJ5 165 aa19.56■□□□□ 0.72
CACNA1A-209ENST00000587525 FKBP8Q14318 412 aa19.55■□□□□ 0.72
CACNA1A-209ENST00000587525 IRX6P78412 446 aaPredicted RBP19.54■□□□□ 0.72
CACNA1A-209ENST00000587525 GOLGA3Q08378 1498 aa19.52■□□□□ 0.72
CACNA1A-209ENST00000587525 KCNH8Q96L42 1107 aa19.49■□□□□ 0.71
CACNA1A-209ENST00000587525 ANP32CO43423 234 aa19.44■□□□□ 0.7
CACNA1A-209ENST00000587525 ATAD2BQ9ULI0 1458 aa19.43■□□□□ 0.7
CACNA1A-209ENST00000587525 TOP2AP11388 1531 aaKnown RBP19.42■□□□□ 0.7
CACNA1A-209ENST00000587525 FBLN2P98095 1184 aa19.42■□□□□ 0.7
CACNA1A-209ENST00000587525 SMARCA2P51531 1590 aa19.36■□□□□ 0.69
CACNA1A-209ENST00000587525 RRP7BPQ9NSQ0 103 aa19.34■□□□□ 0.69
CACNA1A-209ENST00000587525 SUPT16HQ9Y5B9 1047 aaKnown RBP19.34■□□□□ 0.69
CACNA1A-209ENST00000587525 HNRNPUQ00839 825 aaKnown RBP eCLIP19.33■□□□□ 0.68
CACNA1A-209ENST00000587525 ZNF777Q9ULD5 760 aaPredicted RBP19.33■□□□□ 0.68
CACNA1A-209ENST00000587525 CEP164Q9UPV0 1460 aa19.31■□□□□ 0.68
CACNA1A-209ENST00000587525 RAPGEF2Q9Y4G8 1499 aa19.31■□□□□ 0.68
CACNA1A-209ENST00000587525 FAM9BQ8IZU0 186 aa19.3■□□□□ 0.68
CACNA1A-209ENST00000587525 EIF4G1Q04637 1599 aaKnown RBP19.28■□□□□ 0.68
CACNA1A-209ENST00000587525 EEA1Q15075 1411 aa19.27■□□□□ 0.68
CACNA1A-209ENST00000587525 SALL2Q9Y467 1007 aaPredicted RBP19.27■□□□□ 0.67
CACNA1A-209ENST00000587525 ANP32EQ9BTT0 268 aa19.23■□□□□ 0.67
CACNA1A-209ENST00000587525 TONSLQ96HA7 1378 aa19.23■□□□□ 0.67
CACNA1A-209ENST00000587525 BCL11AQ9H165 835 aa19.22■□□□□ 0.67
CACNA1A-209ENST00000587525 VPS8Q8N3P4 1428 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms