RNA–Protein interactions for RNA: ENST00000587072.1

GCDH-205, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 5

Gene GCDH, Length 453 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-205ENST00000587072 RIMBP3CA6NJZ7 1639 aa27.1■■□□□ 1.93
GCDH-205ENST00000587072 RIMBP3BA6NNM3 1639 aa27.1■■□□□ 1.93
GCDH-205ENST00000587072 RIMBP3Q9UFD9 1639 aa27.1■■□□□ 1.93
GCDH-205ENST00000587072 SHROOM2Q13796 1616 aa27.09■■□□□ 1.93
GCDH-205ENST00000587072 KIF21BO75037 1637 aa27.05■■□□□ 1.92
GCDH-205ENST00000587072 IQGAP2Q13576 1575 aa27.03■■□□□ 1.92
GCDH-205ENST00000587072 CTTNBP2Q8WZ74 1663 aa27.01■■□□□ 1.92
GCDH-205ENST00000587072 JPH4Q96JJ6 628 aa27.01■■□□□ 1.91
GCDH-205ENST00000587072 PRG4Q92954 1404 aaPredicted RBP26.96■■□□□ 1.91
GCDH-205ENST00000587072 GOLGA3Q08378 1498 aa26.92■■□□□ 1.9
GCDH-205ENST00000587072 ARAP1Q96P48 1450 aa26.92■■□□□ 1.9
GCDH-205ENST00000587072 ERCC6L2Q5T890 1561 aa26.92■■□□□ 1.9
GCDH-205ENST00000587072 UGGT2Q9NYU1 1516 aa26.88■■□□□ 1.89
GCDH-205ENST00000587072 CARMIL2Q6F5E8 1435 aa26.85■■□□□ 1.89
GCDH-205ENST00000587072 CYB5RLQ6IPT4 315 aa26.82■■□□□ 1.88
GCDH-205ENST00000587072 UBTFP17480 764 aaKnown RBP26.78■■□□□ 1.88
GCDH-205ENST00000587072 DISP1Q96F81 1524 aa26.78■■□□□ 1.88
GCDH-205ENST00000587072 EHMT2Q96KQ7 1210 aa26.77■■□□□ 1.88
GCDH-205ENST00000587072 KIAA0556O60303 1618 aa26.76■■□□□ 1.87
GCDH-205ENST00000587072 TNIKQ9UKE5 1360 aa26.72■■□□□ 1.87
GCDH-205ENST00000587072 PTPRGP23470 1445 aa26.68■■□□□ 1.86
GCDH-205ENST00000587072 SAMD9Q5K651 1589 aa26.67■■□□□ 1.86
GCDH-205ENST00000587072 EFCAB5A4FU69 1503 aa26.63■■□□□ 1.85
GCDH-205ENST00000587072 RANGAP1P46060 587 aaPredicted RBP26.59■■□□□ 1.85
GCDH-205ENST00000587072 TTBK1Q5TCY1 1321 aaPredicted RBP26.59■■□□□ 1.85
GCDH-205ENST00000587072 P3H3Q8IVL6 736 aa26.53■■□□□ 1.84
GCDH-205ENST00000587072 ADCY10Q96PN6 1610 aa26.53■■□□□ 1.84
GCDH-205ENST00000587072 UACAQ9BZF9 1416 aa26.52■■□□□ 1.84
GCDH-205ENST00000587072 UHRF1BP1LA0JNW5 1464 aa26.49■■□□□ 1.83
GCDH-205ENST00000587072 FHOD3Q2V2M9 1422 aa26.49■■□□□ 1.83
GCDH-205ENST00000587072 ABCC2Q92887 1545 aa26.48■■□□□ 1.83
GCDH-205ENST00000587072 ARHGAP35Q9NRY4 1499 aa26.48■■□□□ 1.83
GCDH-205ENST00000587072 ABCA8O94911 1581 aa26.44■■□□□ 1.82
GCDH-205ENST00000587072 PLB1Q6P1J6 1458 aa26.43■■□□□ 1.82
GCDH-205ENST00000587072 NPM1P06748 294 aaKnown RBP eCLIP26.43■■□□□ 1.82
GCDH-205ENST00000587072 CLIP1P30622 1438 aa26.42■■□□□ 1.82
GCDH-205ENST00000587072 LOC105371045A0A1W2PR82 267 aa26.41■■□□□ 1.82
GCDH-205ENST00000587072 FMN1Q68DA7 1419 aa26.37■■□□□ 1.81
GCDH-205ENST00000587072 RAPGEF6Q8TEU7 1601 aa26.36■■□□□ 1.81
GCDH-205ENST00000587072 CEP162Q5TB80 1403 aa26.36■■□□□ 1.81
GCDH-205ENST00000587072 KDM5BQ9UGL1 1544 aa26.35■■□□□ 1.81
GCDH-205ENST00000587072 MAPKBP1O60336 1514 aa26.34■■□□□ 1.81
GCDH-205ENST00000587072 ZCCHC11Q5TAX3 1644 aaKnown RBP26.31■■□□□ 1.8
GCDH-205ENST00000587072 NUP153P49790 1475 aaKnown RBP26.24■■□□□ 1.79
GCDH-205ENST00000587072 HECW1Q76N89 1606 aa26.23■■□□□ 1.79
GCDH-205ENST00000587072 ASXL2Q76L83 1435 aa26.22■■□□□ 1.79
GCDH-205ENST00000587072 TRHP20396 242 aaPredicted RBP26.21■■□□□ 1.79
GCDH-205ENST00000587072 ATP10BO94823 1461 aa26.2■■□□□ 1.78
GCDH-205ENST00000587072 ARID3CA6NKF2 412 aa26.17■■□□□ 1.78
GCDH-205ENST00000587072 ABCC10Q5T3U5 1492 aa26.17■■□□□ 1.78
GCDH-205ENST00000587072 PCF11O94913 1555 aaKnown RBP26.16■■□□□ 1.78
GCDH-205ENST00000587072 CASKIN1Q8WXD9 1431 aa26.16■■□□□ 1.78
GCDH-205ENST00000587072 WDR7Q9Y4E6 1490 aa26.15■■□□□ 1.78
GCDH-205ENST00000587072 FYCO1Q9BQS8 1478 aa26.14■■□□□ 1.78
GCDH-205ENST00000587072 DIP2BQ9P265 1576 aa26.14■■□□□ 1.78
GCDH-205ENST00000587072 ATP1B4Q9UN42 357 aaPredicted RBP26.13■■□□□ 1.77
GCDH-205ENST00000587072 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.12■■□□□ 1.77
GCDH-205ENST00000587072 HNRNPUL2Q1KMD3 747 aaKnown RBP26.12■■□□□ 1.77
GCDH-205ENST00000587072 KIF13AQ9H1H9 1805 aa26.11■■□□□ 1.77
GCDH-205ENST00000587072 EPRSP07814 1512 aaKnown RBP26.11■■□□□ 1.77
GCDH-205ENST00000587072 CDK13Q14004 1512 aaKnown RBP26.09■■□□□ 1.77
GCDH-205ENST00000587072 CCDC18Q5T9S5 1454 aa26.07■■□□□ 1.76
GCDH-205ENST00000587072 FAM69CQ0P6D2 419 aa26.07■■□□□ 1.76
GCDH-205ENST00000587072 GLI2P10070 1586 aa26.05■■□□□ 1.76
GCDH-205ENST00000587072 VPS8Q8N3P4 1428 aa26.04■■□□□ 1.76
GCDH-205ENST00000587072 LRRIQ1Q96JM4 1722 aa26.03■■□□□ 1.76
GCDH-205ENST00000587072 PLEKHD1A6NEE1 506 aa26.02■■□□□ 1.76
GCDH-205ENST00000587072 CDK11AQ9UQ88 783 aaPredicted RBP26.01■■□□□ 1.75
GCDH-205ENST00000587072 KCNH8Q96L42 1107 aa25.97■■□□□ 1.75
GCDH-205ENST00000587072 CFAP43Q8NDM7 1665 aa25.93■■□□□ 1.74
GCDH-205ENST00000587072 MAP3K4Q9Y6R4 1608 aa25.93■■□□□ 1.74
GCDH-205ENST00000587072 TROQ12816 1431 aaPredicted RBP25.9■■□□□ 1.74
GCDH-205ENST00000587072 TSPOAP1O95153 1857 aa25.89■■□□□ 1.74
GCDH-205ENST00000587072 ABCA9Q8IUA7 1624 aa25.89■■□□□ 1.74
GCDH-205ENST00000587072 KIF14Q15058 1648 aa25.86■■□□□ 1.73
GCDH-205ENST00000587072 CD109Q6YHK3 1445 aa25.86■■□□□ 1.73
GCDH-205ENST00000587072 TEX14Q8IWB6 1497 aa25.83■■□□□ 1.73
GCDH-205ENST00000587072 PPRC1Q5VV67 1664 aaKnown RBP25.83■■□□□ 1.73
GCDH-205ENST00000587072 MAGI3Q5TCQ9 1506 aa25.83■■□□□ 1.72
GCDH-205ENST00000587072 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.82■■□□□ 1.72
GCDH-205ENST00000587072 TIAM1Q13009 1591 aa25.82■■□□□ 1.72
GCDH-205ENST00000587072 TTC37Q6PGP7 1564 aa25.8■■□□□ 1.72
GCDH-205ENST00000587072 MTUS2Q5JR59 1369 aa25.8■■□□□ 1.72
GCDH-205ENST00000587072 MAP3K1Q13233 1512 aa25.79■■□□□ 1.72
GCDH-205ENST00000587072 EHBP1L1Q8N3D4 1523 aa25.78■■□□□ 1.72
GCDH-205ENST00000587072 APLP2Q06481 763 aa25.75■■□□□ 1.71
GCDH-205ENST00000587072 MYO5CQ9NQX4 1742 aa25.71■■□□□ 1.71
GCDH-205ENST00000587072 LRRC9Q6ZRR7 1453 aa25.69■■□□□ 1.7
GCDH-205ENST00000587072 ARAP3Q8WWN8 1544 aa25.68■■□□□ 1.7
GCDH-205ENST00000587072 PLCH2O75038 1416 aa25.68■■□□□ 1.7
GCDH-205ENST00000587072 CFAP74Q9C0B2 1584 aa25.68■■□□□ 1.7
GCDH-205ENST00000587072 NEO1Q92859 1461 aa25.67■■□□□ 1.7
GCDH-205ENST00000587072 KDM6BO15054 1643 aa25.66■■□□□ 1.7
GCDH-205ENST00000587072 SUPT6HQ7KZ85 1726 aaKnown RBP25.66■■□□□ 1.7
GCDH-205ENST00000587072 PHLDB1Q86UU1 1377 aa25.66■■□□□ 1.7
GCDH-205ENST00000587072 FANCAO15360 1455 aa25.64■■□□□ 1.69
GCDH-205ENST00000587072 PREX2Q70Z35 1606 aa25.63■■□□□ 1.69
GCDH-205ENST00000587072 ARHGAP5Q13017 1502 aa25.61■■□□□ 1.69
GCDH-205ENST00000587072 CDC42BPAQ5VT25 1732 aa25.6■■□□□ 1.69
GCDH-205ENST00000587072 CCNB3Q8WWL7 1395 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms