RNA–Protein interactions for RNA: ENST00000586718.1

NPC1-204, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 3

Gene NPC1, Length 574 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-204ENST00000586718 EFCAB5A4FU69 1503 aa13.6□□□□□ -0.23
NPC1-204ENST00000586718 IQGAP2Q13576 1575 aa13.6□□□□□ -0.23
NPC1-204ENST00000586718 CHMP7Q8WUX9 453 aaPredicted RBP13.57□□□□□ -0.24
NPC1-204ENST00000586718 CEP170Q5SW79 1584 aa13.55□□□□□ -0.24
NPC1-204ENST00000586718 SAMD9Q5K651 1589 aa13.54□□□□□ -0.24
NPC1-204ENST00000586718 NUP160Q12769 1436 aa13.53□□□□□ -0.24
NPC1-204ENST00000586718 KIAA0586Q9BVV6 1533 aa13.53□□□□□ -0.24
NPC1-204ENST00000586718 FBLN2P98095 1184 aa13.52□□□□□ -0.25
NPC1-204ENST00000586718 ARHGAP35Q9NRY4 1499 aa13.51□□□□□ -0.25
NPC1-204ENST00000586718 RANGAP1P46060 587 aaPredicted RBP13.5□□□□□ -0.25
NPC1-204ENST00000586718 UGGT2Q9NYU1 1516 aa13.49□□□□□ -0.25
NPC1-204ENST00000586718 ARAP1Q96P48 1450 aa13.49□□□□□ -0.25
NPC1-204ENST00000586718 VPS8Q8N3P4 1428 aa13.49□□□□□ -0.25
NPC1-204ENST00000586718 KIAA0556O60303 1618 aa13.46□□□□□ -0.25
NPC1-204ENST00000586718 FHOD3Q2V2M9 1422 aa13.43□□□□□ -0.26
NPC1-204ENST00000586718 CLASP1Q7Z460 1538 aa13.43□□□□□ -0.26
NPC1-204ENST00000586718 SHROOM2Q13796 1616 aa13.42□□□□□ -0.26
NPC1-204ENST00000586718 PCF11O94913 1555 aaKnown RBP13.41□□□□□ -0.26
NPC1-204ENST00000586718 FMN1Q68DA7 1419 aa13.41□□□□□ -0.26
NPC1-204ENST00000586718 CARMIL2Q6F5E8 1435 aa13.41□□□□□ -0.26
NPC1-204ENST00000586718 FYCO1Q9BQS8 1478 aa13.39□□□□□ -0.27
NPC1-204ENST00000586718 DISP1Q96F81 1524 aa13.39□□□□□ -0.27
NPC1-204ENST00000586718 CFAP43Q8NDM7 1665 aa13.37□□□□□ -0.27
NPC1-204ENST00000586718 HECW1Q76N89 1606 aa13.37□□□□□ -0.27
NPC1-204ENST00000586718 APLP2Q06481 763 aa13.35□□□□□ -0.27
NPC1-204ENST00000586718 CASKIN1Q8WXD9 1431 aa13.34□□□□□ -0.27
NPC1-204ENST00000586718 P3H3Q8IVL6 736 aa13.34□□□□□ -0.27
NPC1-204ENST00000586718 PRG4Q92954 1404 aaPredicted RBP13.32□□□□□ -0.28
NPC1-204ENST00000586718 JPH4Q96JJ6 628 aa13.32□□□□□ -0.28
NPC1-204ENST00000586718 TIAM1Q13009 1591 aa13.32□□□□□ -0.28
NPC1-204ENST00000586718 RAPGEF6Q8TEU7 1601 aa13.31□□□□□ -0.28
NPC1-204ENST00000586718 CCDC18Q5T9S5 1454 aa13.3□□□□□ -0.28
NPC1-204ENST00000586718 MAP3K1Q13233 1512 aa13.3□□□□□ -0.28
NPC1-204ENST00000586718 OSCARQ8IYS5 282 aa13.26□□□□□ -0.29
NPC1-204ENST00000586718 LRRIQ1Q96JM4 1722 aa13.26□□□□□ -0.29
NPC1-204ENST00000586718 ABCA8O94911 1581 aa13.24□□□□□ -0.29
NPC1-204ENST00000586718 ERCC6L2Q5T890 1561 aa13.24□□□□□ -0.29
NPC1-204ENST00000586718 ATP1B4Q9UN42 357 aaPredicted RBP13.23□□□□□ -0.29
NPC1-204ENST00000586718 EHBP1L1Q8N3D4 1523 aa13.23□□□□□ -0.29
NPC1-204ENST00000586718 PTPRGP23470 1445 aa13.22□□□□□ -0.29
NPC1-204ENST00000586718 TTBK1Q5TCY1 1321 aaPredicted RBP13.21□□□□□ -0.29
NPC1-204ENST00000586718 EPRSP07814 1512 aaKnown RBP13.21□□□□□ -0.29
NPC1-204ENST00000586718 NUP153P49790 1475 aaKnown RBP13.2□□□□□ -0.3
NPC1-204ENST00000586718 PLB1Q6P1J6 1458 aa13.2□□□□□ -0.3
NPC1-204ENST00000586718 LRRC9Q6ZRR7 1453 aa13.2□□□□□ -0.3
NPC1-204ENST00000586718 CDK13Q14004 1512 aaKnown RBP13.18□□□□□ -0.3
NPC1-204ENST00000586718 ABCC2Q92887 1545 aa13.18□□□□□ -0.3
NPC1-204ENST00000586718 SUPT6HQ7KZ85 1726 aaKnown RBP13.18□□□□□ -0.3
NPC1-204ENST00000586718 UACAQ9BZF9 1416 aa13.17□□□□□ -0.3
NPC1-204ENST00000586718 MTUS2Q5JR59 1369 aa13.17□□□□□ -0.3
NPC1-204ENST00000586718 PPARGC1BQ86YN6 1023 aaKnown RBP13.15□□□□□ -0.3
NPC1-204ENST00000586718 UHRF1BP1LA0JNW5 1464 aa13.14□□□□□ -0.31
NPC1-204ENST00000586718 TRIM26Q12899 539 aaPredicted RBP13.13□□□□□ -0.31
NPC1-204ENST00000586718 ARHGEF11O15085 1522 aa13.13□□□□□ -0.31
NPC1-204ENST00000586718 CDK11AQ9UQ88 783 aaPredicted RBP13.12□□□□□ -0.31
NPC1-204ENST00000586718 ZCCHC11Q5TAX3 1644 aaKnown RBP13.11□□□□□ -0.31
NPC1-204ENST00000586718 ADCY10Q96PN6 1610 aa13.11□□□□□ -0.31
NPC1-204ENST00000586718 KIF14Q15058 1648 aa13.1□□□□□ -0.31
NPC1-204ENST00000586718 RIMBP3CA6NJZ7 1639 aa13.1□□□□□ -0.31
NPC1-204ENST00000586718 RIMBP3BA6NNM3 1639 aa13.1□□□□□ -0.31
NPC1-204ENST00000586718 RIMBP3Q9UFD9 1639 aa13.1□□□□□ -0.31
NPC1-204ENST00000586718 MAGI3Q5TCQ9 1506 aa13.09□□□□□ -0.31
NPC1-204ENST00000586718 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.09□□□□□ -0.31
NPC1-204ENST00000586718 HNRNPUL2Q1KMD3 747 aaKnown RBP13.09□□□□□ -0.31
NPC1-204ENST00000586718 KANK4Q5T7N3 995 aaPredicted RBP13.09□□□□□ -0.31
NPC1-204ENST00000586718 ITSN2Q9NZM3 1697 aa13.08□□□□□ -0.31
NPC1-204ENST00000586718 TROQ12816 1431 aaPredicted RBP13.08□□□□□ -0.32
NPC1-204ENST00000586718 NCOA2Q15596 1464 aa13.08□□□□□ -0.32
NPC1-204ENST00000586718 ARID3CA6NKF2 412 aa13.07□□□□□ -0.32
NPC1-204ENST00000586718 ATP10BO94823 1461 aa13.07□□□□□ -0.32
NPC1-204ENST00000586718 KDM5BQ9UGL1 1544 aa13.06□□□□□ -0.32
NPC1-204ENST00000586718 RRBP1Q9P2E9 1410 aaKnown RBP13.04□□□□□ -0.32
NPC1-204ENST00000586718 PCGF6Q9BYE7 350 aa13.03□□□□□ -0.32
NPC1-204ENST00000586718 MYOM3Q5VTT5 1437 aa13.02□□□□□ -0.33
NPC1-204ENST00000586718 PLEKHD1A6NEE1 506 aa13.01□□□□□ -0.33
NPC1-204ENST00000586718 PHLDB1Q86UU1 1377 aa13.01□□□□□ -0.33
NPC1-204ENST00000586718 CCNB3Q8WWL7 1395 aa13.01□□□□□ -0.33
NPC1-204ENST00000586718 FGD6Q6ZV73 1430 aa13□□□□□ -0.33
NPC1-204ENST00000586718 PTPN23Q9H3S7 1636 aa12.99□□□□□ -0.33
NPC1-204ENST00000586718 CDC42BPAQ5VT25 1732 aa12.98□□□□□ -0.33
NPC1-204ENST00000586718 MYO5CQ9NQX4 1742 aa12.98□□□□□ -0.33
NPC1-204ENST00000586718 PREX2Q70Z35 1606 aa12.98□□□□□ -0.33
NPC1-204ENST00000586718 WDR7Q9Y4E6 1490 aa12.97□□□□□ -0.33
NPC1-204ENST00000586718 MIA2Q96PC5 1412 aa12.96□□□□□ -0.33
NPC1-204ENST00000586718 TTC37Q6PGP7 1564 aa12.96□□□□□ -0.33
NPC1-204ENST00000586718 NPM1P06748 294 aaKnown RBP eCLIP12.96□□□□□ -0.33
NPC1-204ENST00000586718 ABCC10Q5T3U5 1492 aa12.95□□□□□ -0.34
NPC1-204ENST00000586718 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.94□□□□□ -0.34
NPC1-204ENST00000586718 TCOF1Q13428 1488 aaKnown RBP12.94□□□□□ -0.34
NPC1-204ENST00000586718 MAPKBP1O60336 1514 aa12.93□□□□□ -0.34
NPC1-204ENST00000586718 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.93□□□□□ -0.34
NPC1-204ENST00000586718 ASXL2Q76L83 1435 aa12.92□□□□□ -0.34
NPC1-204ENST00000586718 FAM50AQ14320 339 aaKnown RBP12.91□□□□□ -0.34
NPC1-204ENST00000586718 GPATCH8Q9UKJ3 1502 aaKnown RBP12.91□□□□□ -0.34
NPC1-204ENST00000586718 ABCA9Q8IUA7 1624 aa12.91□□□□□ -0.34
NPC1-204ENST00000586718 CDC42BPBQ9Y5S2 1711 aa12.9□□□□□ -0.34
NPC1-204ENST00000586718 CAMSAP2Q08AD1 1489 aa12.9□□□□□ -0.34
NPC1-204ENST00000586718 ARHGAP5Q13017 1502 aa12.89□□□□□ -0.35
NPC1-204ENST00000586718 ARAP3Q8WWN8 1544 aa12.89□□□□□ -0.35
NPC1-204ENST00000586718 CROCC2H7BZ55 1655 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms