RNA–Protein interactions for RNA: ENST00000586588.5

DNMT1-207, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 3,094 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-207ENST00000586588 DEKP35659 375 aaKnown RBP18.45■□□□□ 0.54
DNMT1-207ENST00000586588 RRBP1Q9P2E9 1410 aaKnown RBP18.44■□□□□ 0.54
DNMT1-207ENST00000586588 FANCD2Q9BXW9 1451 aa18.4■□□□□ 0.54
DNMT1-207ENST00000586588 PPP1R15AO75807 674 aaPredicted RBP18.4■□□□□ 0.54
DNMT1-207ENST00000586588 DDX10Q13206 875 aaKnown RBP18.38■□□□□ 0.53
DNMT1-207ENST00000586588 ERICH6BQ5W0A0 696 aa18.36■□□□□ 0.53
DNMT1-207ENST00000586588 LAMC3Q9Y6N6 1575 aa18.34■□□□□ 0.53
DNMT1-207ENST00000586588 TRIM52Q96A61 297 aa18.34■□□□□ 0.53
DNMT1-207ENST00000586588 RAPGEF2Q9Y4G8 1499 aa18.34■□□□□ 0.53
DNMT1-207ENST00000586588 MAPKBP1O60336 1514 aa18.33■□□□□ 0.52
DNMT1-207ENST00000586588 ANP32CO43423 234 aa18.31■□□□□ 0.52
DNMT1-207ENST00000586588 FGD5Q6ZNL6 1462 aa18.28■□□□□ 0.52
DNMT1-207ENST00000586588 TIMELESSQ9UNS1 1208 aa18.28■□□□□ 0.52
DNMT1-207ENST00000586588 CCNB3Q8WWL7 1395 aa18.27■□□□□ 0.52
DNMT1-207ENST00000586588 WDR97A6NE52 1622 aa18.27■□□□□ 0.51
DNMT1-207ENST00000586588 ANO8Q9HCE9 1232 aaPredicted RBP18.26■□□□□ 0.51
DNMT1-207ENST00000586588 KANK4Q5T7N3 995 aaPredicted RBP18.26■□□□□ 0.51
DNMT1-207ENST00000586588 ARAP1Q96P48 1450 aa18.24■□□□□ 0.51
DNMT1-207ENST00000586588 DNMBPQ6XZF7 1577 aa18.24■□□□□ 0.51
DNMT1-207ENST00000586588 KIF21AQ7Z4S6 1674 aa18.24■□□□□ 0.51
DNMT1-207ENST00000586588 TOPBP1Q92547 1522 aa18.23■□□□□ 0.51
DNMT1-207ENST00000586588 RAB3GAP2Q9H2M9 1393 aa18.23■□□□□ 0.51
DNMT1-207ENST00000586588 URB2Q14146 1524 aaKnown RBP18.22■□□□□ 0.51
DNMT1-207ENST00000586588 PPP4R2Q9NY27 417 aa18.21■□□□□ 0.51
DNMT1-207ENST00000586588 NOP58Q9Y2X3 529 aaKnown RBP18.2■□□□□ 0.5
DNMT1-207ENST00000586588 KIF27Q86VH2 1401 aa18.19■□□□□ 0.5
DNMT1-207ENST00000586588 ERICH3Q5RHP9 1530 aa18.18■□□□□ 0.5
DNMT1-207ENST00000586588 PRXQ9BXM0 1461 aa18.18■□□□□ 0.5
DNMT1-207ENST00000586588 POLA1P09884 1462 aaPredicted RBP18.18■□□□□ 0.5
DNMT1-207ENST00000586588 RAD54L2Q9Y4B4 1467 aa18.17■□□□□ 0.5
DNMT1-207ENST00000586588 PDS5BQ9NTI5 1447 aa18.16■□□□□ 0.5
DNMT1-207ENST00000586588 SETD5Q9C0A6 1442 aa18.14■□□□□ 0.49
DNMT1-207ENST00000586588 RANGAP1P46060 587 aaPredicted RBP18.12■□□□□ 0.49
DNMT1-207ENST00000586588 SALL2Q9Y467 1007 aaPredicted RBP18.1■□□□□ 0.49
DNMT1-207ENST00000586588 IRX6P78412 446 aaPredicted RBP18.1■□□□□ 0.49
DNMT1-207ENST00000586588 HNRNPUQ00839 825 aaKnown RBP eCLIP18.09■□□□□ 0.49
DNMT1-207ENST00000586588 IGF1RP08069 1367 aa18.08■□□□□ 0.49
DNMT1-207ENST00000586588 ABCA10Q8WWZ4 1543 aa18.08■□□□□ 0.49
DNMT1-207ENST00000586588 NBR1Q14596 966 aa18.07■□□□□ 0.48
DNMT1-207ENST00000586588 SIN3AQ96ST3 1273 aa18.07■□□□□ 0.48
DNMT1-207ENST00000586588 PAK3O75914 559 aaPredicted RBP18.05■□□□□ 0.48
DNMT1-207ENST00000586588 RTL5Q5HYW3 569 aaPredicted RBP18.03■□□□□ 0.48
DNMT1-207ENST00000586588 MAP3K1Q13233 1512 aa18.01■□□□□ 0.47
DNMT1-207ENST00000586588 UBE2Q2Q8WVN8 375 aa18.01■□□□□ 0.47
DNMT1-207ENST00000586588 HIRIP3Q9BW71 556 aaPredicted RBP18■□□□□ 0.47
DNMT1-207ENST00000586588 IPO9Q96P70 1041 aaKnown RBP17.99■□□□□ 0.47
DNMT1-207ENST00000586588 MRC2Q9UBG0 1479 aa17.98■□□□□ 0.47
DNMT1-207ENST00000586588 TARBP1Q13395 1621 aaKnown RBP17.97■□□□□ 0.47
DNMT1-207ENST00000586588 ABCA5Q8WWZ7 1642 aa17.96■□□□□ 0.47
DNMT1-207ENST00000586588 B4GALNT3Q6L9W6 998 aa17.96■□□□□ 0.47
DNMT1-207ENST00000586588 CARMIL1Q5VZK9 1371 aa17.96■□□□□ 0.47
DNMT1-207ENST00000586588 ANP32AP39687 249 aaKnown RBP17.95■□□□□ 0.46
DNMT1-207ENST00000586588 TDRD9Q8NDG6 1382 aaKnown RBP17.94■□□□□ 0.46
DNMT1-207ENST00000586588 WASHC2AQ641Q2 1341 aa17.93■□□□□ 0.46
DNMT1-207ENST00000586588 IL27Q8NEV9 243 aa17.93■□□□□ 0.46
DNMT1-207ENST00000586588 ARHGAP35Q9NRY4 1499 aa17.93■□□□□ 0.46
DNMT1-207ENST00000586588 ZBTB47Q9UFB7 747 aaPredicted RBP17.92■□□□□ 0.46
DNMT1-207ENST00000586588 WDR62O43379 1518 aa17.91■□□□□ 0.46
DNMT1-207ENST00000586588 TIAM1Q13009 1591 aa17.91■□□□□ 0.46
DNMT1-207ENST00000586588 FHAD1B1AJZ9 1412 aa17.89■□□□□ 0.45
DNMT1-207ENST00000586588 C11orf95C9JLR9 678 aaPredicted RBP17.88■□□□□ 0.45
DNMT1-207ENST00000586588 TONSLQ96HA7 1378 aa17.88■□□□□ 0.45
DNMT1-207ENST00000586588 CCDC136Q96JN2 1154 aa17.88■□□□□ 0.45
DNMT1-207ENST00000586588 ZBED9Q6R2W3 1325 aa17.88■□□□□ 0.45
DNMT1-207ENST00000586588 USP35Q9P2H5 1018 aa17.87■□□□□ 0.45
DNMT1-207ENST00000586588 THOC2Q8NI27 1593 aaKnown RBP17.87■□□□□ 0.45
DNMT1-207ENST00000586588 GAPVD1Q14C86 1478 aa17.87■□□□□ 0.45
DNMT1-207ENST00000586588 CUL7Q14999 1698 aa17.86■□□□□ 0.45
DNMT1-207ENST00000586588 ERCC6Q03468 1493 aa17.85■□□□□ 0.45
DNMT1-207ENST00000586588 LRRC9Q6ZRR7 1453 aa17.85■□□□□ 0.45
DNMT1-207ENST00000586588 PHLDB1Q86UU1 1377 aa17.83■□□□□ 0.45
DNMT1-207ENST00000586588 WASHC2CQ9Y4E1 1318 aa17.82■□□□□ 0.44
DNMT1-207ENST00000586588 AQRO60306 1485 aaKnown RBP eCLIP17.81■□□□□ 0.443e-7■■■■■ 29.2
DNMT1-207ENST00000586588 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.81■□□□□ 0.44
DNMT1-207ENST00000586588 ZNF608Q9ULD9 1512 aaPredicted RBP17.81■□□□□ 0.44
DNMT1-207ENST00000586588 PBRM1Q86U86 1689 aa17.8■□□□□ 0.44
DNMT1-207ENST00000586588 NCOA2Q15596 1464 aa17.8■□□□□ 0.44
DNMT1-207ENST00000586588 RTN4Q9NQC3 1192 aaKnown RBP17.79■□□□□ 0.44
DNMT1-207ENST00000586588 FAM50AQ14320 339 aaKnown RBP17.78■□□□□ 0.44
DNMT1-207ENST00000586588 RNF123Q5XPI4 1314 aa17.76■□□□□ 0.43
DNMT1-207ENST00000586588 CNTLNQ9NXG0 1405 aa17.76■□□□□ 0.43
DNMT1-207ENST00000586588 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.76■□□□□ 0.43
DNMT1-207ENST00000586588 IFT140Q96RY7 1462 aa17.76■□□□□ 0.43
DNMT1-207ENST00000586588 SMG6Q86US8 1419 aaKnown RBP17.75■□□□□ 0.43
DNMT1-207ENST00000586588 CTTNBP2Q8WZ74 1663 aa17.74■□□□□ 0.43
DNMT1-207ENST00000586588 KDM5BQ9UGL1 1544 aa17.74■□□□□ 0.43
DNMT1-207ENST00000586588 CCDC184Q52MB2 194 aa17.73■□□□□ 0.43
DNMT1-207ENST00000586588 UACAQ9BZF9 1416 aa17.72■□□□□ 0.43
DNMT1-207ENST00000586588 PRKRIP1Q9H875 184 aaPredicted RBP17.72■□□□□ 0.43
DNMT1-207ENST00000586588 ADAMTS12P58397 1594 aa17.71■□□□□ 0.43
DNMT1-207ENST00000586588 CFAP43Q8NDM7 1665 aa17.71■□□□□ 0.43
DNMT1-207ENST00000586588 EIF4G3O43432 1585 aaKnown RBP17.71■□□□□ 0.42
DNMT1-207ENST00000586588 PPM1GO15355 546 aaPredicted RBP17.7■□□□□ 0.42
DNMT1-207ENST00000586588 NEFMP07197 916 aa17.7■□□□□ 0.42
DNMT1-207ENST00000586588 FAM9BQ8IZU0 186 aa17.7■□□□□ 0.42
DNMT1-207ENST00000586588 MRS2Q9HD23 443 aa17.69■□□□□ 0.42
DNMT1-207ENST00000586588 HSPA5P11021 654 aaKnown RBP17.68■□□□□ 0.42
DNMT1-207ENST00000586588 GRIN2BQ13224 1484 aa17.68■□□□□ 0.42
DNMT1-207ENST00000586588 CCDC18Q5T9S5 1454 aa17.67■□□□□ 0.42
DNMT1-207ENST00000586588 NUDCQ9Y266 331 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms