RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 SHROOM2Q13796 1616 aa31.6■■■□□ 2.65
DDX39A-204ENST00000586558 ARHGEF11O15085 1522 aa31.59■■■□□ 2.65
DDX39A-204ENST00000586558 IQGAP2Q13576 1575 aa31.56■■■□□ 2.64
DDX39A-204ENST00000586558 JPH4Q96JJ6 628 aa31.54■■■□□ 2.64
DDX39A-204ENST00000586558 RIMBP3CA6NJZ7 1639 aa31.52■■■□□ 2.64
DDX39A-204ENST00000586558 RIMBP3BA6NNM3 1639 aa31.52■■■□□ 2.64
DDX39A-204ENST00000586558 RIMBP3Q9UFD9 1639 aa31.52■■■□□ 2.64
DDX39A-204ENST00000586558 CTTNBP2Q8WZ74 1663 aa31.51■■■□□ 2.63
DDX39A-204ENST00000586558 GOLGA3Q08378 1498 aa31.5■■■□□ 2.63
DDX39A-204ENST00000586558 PRG4Q92954 1404 aaPredicted RBP31.47■■■□□ 2.63
DDX39A-204ENST00000586558 UGGT2Q9NYU1 1516 aa31.41■■■□□ 2.62
DDX39A-204ENST00000586558 ERCC6L2Q5T890 1561 aa31.39■■■□□ 2.61
DDX39A-204ENST00000586558 CARMIL2Q6F5E8 1435 aa31.36■■■□□ 2.61
DDX39A-204ENST00000586558 ARAP1Q96P48 1450 aa31.35■■■□□ 2.61
DDX39A-204ENST00000586558 UBTFP17480 764 aaKnown RBP31.33■■■□□ 2.61
DDX39A-204ENST00000586558 DISP1Q96F81 1524 aa31.29■■■□□ 2.6
DDX39A-204ENST00000586558 EHMT2Q96KQ7 1210 aa31.28■■■□□ 2.6
DDX39A-204ENST00000586558 KIAA0556O60303 1618 aa31.24■■■□□ 2.59
DDX39A-204ENST00000586558 CYB5RLQ6IPT4 315 aa31.23■■■□□ 2.59
DDX39A-204ENST00000586558 TNIKQ9UKE5 1360 aa31.21■■■□□ 2.59
DDX39A-204ENST00000586558 SAMD9Q5K651 1589 aa31.16■■■□□ 2.58
DDX39A-204ENST00000586558 PTPRGP23470 1445 aa31.15■■■□□ 2.58
DDX39A-204ENST00000586558 EFCAB5A4FU69 1503 aa31.14■■■□□ 2.57
DDX39A-204ENST00000586558 RANGAP1P46060 587 aaPredicted RBP31.06■■■□□ 2.56
DDX39A-204ENST00000586558 TTBK1Q5TCY1 1321 aaPredicted RBP30.99■■■□□ 2.55
DDX39A-204ENST00000586558 P3H3Q8IVL6 736 aa30.99■■■□□ 2.55
DDX39A-204ENST00000586558 LOC105371045A0A1W2PR82 267 aa30.98■■■□□ 2.55
DDX39A-204ENST00000586558 ARHGAP35Q9NRY4 1499 aa30.97■■■□□ 2.55
DDX39A-204ENST00000586558 FHOD3Q2V2M9 1422 aa30.96■■■□□ 2.55
DDX39A-204ENST00000586558 UACAQ9BZF9 1416 aa30.96■■■□□ 2.55
DDX39A-204ENST00000586558 UHRF1BP1LA0JNW5 1464 aa30.94■■■□□ 2.54
DDX39A-204ENST00000586558 CLIP1P30622 1438 aa30.93■■■□□ 2.54
DDX39A-204ENST00000586558 ADCY10Q96PN6 1610 aa30.92■■■□□ 2.54
DDX39A-204ENST00000586558 ABCC2Q92887 1545 aa30.9■■■□□ 2.54
DDX39A-204ENST00000586558 CEP162Q5TB80 1403 aa30.88■■■□□ 2.53
DDX39A-204ENST00000586558 PLB1Q6P1J6 1458 aa30.88■■■□□ 2.53
DDX39A-204ENST00000586558 ABCA8O94911 1581 aa30.88■■■□□ 2.53
DDX39A-204ENST00000586558 FMN1Q68DA7 1419 aa30.83■■■□□ 2.53
DDX39A-204ENST00000586558 NPM1P06748 294 aaKnown RBP eCLIP30.81■■■□□ 2.52
DDX39A-204ENST00000586558 RAPGEF6Q8TEU7 1601 aa30.77■■■□□ 2.52
DDX39A-204ENST00000586558 KDM5BQ9UGL1 1544 aa30.77■■■□□ 2.52
DDX39A-204ENST00000586558 MAPKBP1O60336 1514 aa30.71■■■□□ 2.51
DDX39A-204ENST00000586558 NUP153P49790 1475 aaKnown RBP30.68■■■□□ 2.5
DDX39A-204ENST00000586558 ZCCHC11Q5TAX3 1644 aaKnown RBP30.66■■■□□ 2.5
DDX39A-204ENST00000586558 HECW1Q76N89 1606 aa30.63■■■□□ 2.49
DDX39A-204ENST00000586558 CASKIN1Q8WXD9 1431 aa30.62■■■□□ 2.49
DDX39A-204ENST00000586558 ATP10BO94823 1461 aa30.61■■■□□ 2.49
DDX39A-204ENST00000586558 FYCO1Q9BQS8 1478 aa30.58■■■□□ 2.49
DDX39A-204ENST00000586558 ASXL2Q76L83 1435 aa30.58■■■□□ 2.49
DDX39A-204ENST00000586558 PCF11O94913 1555 aaKnown RBP30.58■■■□□ 2.49
DDX39A-204ENST00000586558 ARID3CA6NKF2 412 aa30.53■■■□□ 2.48
DDX39A-204ENST00000586558 EPRSP07814 1512 aaKnown RBP30.52■■■□□ 2.48
DDX39A-204ENST00000586558 WDR7Q9Y4E6 1490 aa30.51■■■□□ 2.48
DDX39A-204ENST00000586558 ATP1B4Q9UN42 357 aaPredicted RBP30.51■■■□□ 2.47
DDX39A-204ENST00000586558 ABCC10Q5T3U5 1492 aa30.5■■■□□ 2.47
DDX39A-204ENST00000586558 VPS8Q8N3P4 1428 aa30.49■■■□□ 2.47
DDX39A-204ENST00000586558 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.48■■■□□ 2.47
DDX39A-204ENST00000586558 HNRNPUL2Q1KMD3 747 aaKnown RBP30.48■■■□□ 2.47
DDX39A-204ENST00000586558 CCDC18Q5T9S5 1454 aa30.48■■■□□ 2.47
DDX39A-204ENST00000586558 TRHP20396 242 aaPredicted RBP30.47■■■□□ 2.47
DDX39A-204ENST00000586558 CDK13Q14004 1512 aaKnown RBP30.47■■■□□ 2.47
DDX39A-204ENST00000586558 DIP2BQ9P265 1576 aa30.45■■■□□ 2.46
DDX39A-204ENST00000586558 PLEKHD1A6NEE1 506 aa30.4■■■□□ 2.46
DDX39A-204ENST00000586558 CDK11AQ9UQ88 783 aaPredicted RBP30.4■■■□□ 2.46
DDX39A-204ENST00000586558 GLI2P10070 1586 aa30.38■■■□□ 2.45
DDX39A-204ENST00000586558 FAM69CQ0P6D2 419 aa30.38■■■□□ 2.45
DDX39A-204ENST00000586558 LRRIQ1Q96JM4 1722 aa30.38■■■□□ 2.45
DDX39A-204ENST00000586558 KIF13AQ9H1H9 1805 aa30.36■■■□□ 2.45
DDX39A-204ENST00000586558 KCNH8Q96L42 1107 aa30.3■■■□□ 2.44
DDX39A-204ENST00000586558 TROQ12816 1431 aaPredicted RBP30.29■■■□□ 2.44
DDX39A-204ENST00000586558 MAP3K4Q9Y6R4 1608 aa30.22■■■□□ 2.43
DDX39A-204ENST00000586558 CFAP43Q8NDM7 1665 aa30.22■■■□□ 2.43
DDX39A-204ENST00000586558 ABCA9Q8IUA7 1624 aa30.22■■■□□ 2.43
DDX39A-204ENST00000586558 MAP3K1Q13233 1512 aa30.22■■■□□ 2.43
DDX39A-204ENST00000586558 TIAM1Q13009 1591 aa30.2■■■□□ 2.43
DDX39A-204ENST00000586558 MAGI3Q5TCQ9 1506 aa30.19■■■□□ 2.42
DDX39A-204ENST00000586558 KIF14Q15058 1648 aa30.18■■■□□ 2.42
DDX39A-204ENST00000586558 MTUS2Q5JR59 1369 aa30.17■■■□□ 2.42
DDX39A-204ENST00000586558 CD109Q6YHK3 1445 aa30.17■■■□□ 2.42
DDX39A-204ENST00000586558 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.15■■■□□ 2.424e-7■■□□□ 11.9
DDX39A-204ENST00000586558 EHBP1L1Q8N3D4 1523 aa30.14■■■□□ 2.42
DDX39A-204ENST00000586558 APLP2Q06481 763 aa30.13■■■□□ 2.41
DDX39A-204ENST00000586558 TEX14Q8IWB6 1497 aa30.12■■■□□ 2.41
DDX39A-204ENST00000586558 TTC37Q6PGP7 1564 aa30.1■■■□□ 2.41
DDX39A-204ENST00000586558 PPRC1Q5VV67 1664 aaKnown RBP30.07■■■□□ 2.41
DDX39A-204ENST00000586558 LRRC9Q6ZRR7 1453 aa30.07■■■□□ 2.4
DDX39A-204ENST00000586558 TSPOAP1O95153 1857 aa30.06■■■□□ 2.4
DDX39A-204ENST00000586558 ARAP3Q8WWN8 1544 aa30.01■■■□□ 2.39
DDX39A-204ENST00000586558 PLCH2O75038 1416 aa30■■■□□ 2.39
DDX39A-204ENST00000586558 MYO5CQ9NQX4 1742 aa29.97■■■□□ 2.39
DDX39A-204ENST00000586558 PHLDB1Q86UU1 1377 aa29.97■■■□□ 2.39
DDX39A-204ENST00000586558 NEO1Q92859 1461 aa29.97■■■□□ 2.39
DDX39A-204ENST00000586558 SUPT6HQ7KZ85 1726 aaKnown RBP29.96■■■□□ 2.39
DDX39A-204ENST00000586558 KANK4Q5T7N3 995 aaPredicted RBP29.96■■■□□ 2.39
DDX39A-204ENST00000586558 CFAP74Q9C0B2 1584 aa29.94■■■□□ 2.38
DDX39A-204ENST00000586558 FANCAO15360 1455 aa29.93■■■□□ 2.38
DDX39A-204ENST00000586558 NCOA2Q15596 1464 aa29.93■■■□□ 2.38
DDX39A-204ENST00000586558 CCNB3Q8WWL7 1395 aa29.92■■■□□ 2.38
DDX39A-204ENST00000586558 PREX2Q70Z35 1606 aa29.92■■■□□ 2.38
DDX39A-204ENST00000586558 GPATCH8Q9UKJ3 1502 aaKnown RBP29.9■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms