RNA–Protein interactions for RNA: ENST00000585839.5

PKN1-204, Transcript of protein kinase N1, humanhuman

TSL 2

Gene PKN1, Length 3,518 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-204ENST00000585839 TDRD9Q8NDG6 1382 aaKnown RBP26.56■■□□□ 1.84
PKN1-204ENST00000585839 CADPSQ9ULU8 1353 aa26.56■■□□□ 1.84
PKN1-204ENST00000585839 RRP7BPQ9NSQ0 103 aa26.55■■□□□ 1.84
PKN1-204ENST00000585839 POLR3GLQ9BT43 218 aa26.52■■□□□ 1.84
PKN1-204ENST00000585839 FGD5Q6ZNL6 1462 aa26.5■■□□□ 1.83
PKN1-204ENST00000585839 PHLDB1Q86UU1 1377 aa26.5■■□□□ 1.83
PKN1-204ENST00000585839 CFTRP13569 1480 aa26.49■■□□□ 1.83
PKN1-204ENST00000585839 NESP48681 1621 aa26.48■■□□□ 1.83
PKN1-204ENST00000585839 SENP3-EIF4A1A0A087X0R7 540 aa26.45■■□□□ 1.82
PKN1-204ENST00000585839 FBLN2P98095 1184 aa26.43■■□□□ 1.82
PKN1-204ENST00000585839 MTUS2Q5JR59 1369 aa26.42■■□□□ 1.82
PKN1-204ENST00000585839 FOXD1Q16676 465 aa26.39■■□□□ 1.82
PKN1-204ENST00000585839 FKBP8Q14318 412 aa26.39■■□□□ 1.81
PKN1-204ENST00000585839 SUPT16HQ9Y5B9 1047 aaKnown RBP26.39■■□□□ 1.81
PKN1-204ENST00000585839 SETD5Q9C0A6 1442 aa26.35■■□□□ 1.81
PKN1-204ENST00000585839 FANCD2Q9BXW9 1451 aa26.34■■□□□ 1.81
PKN1-204ENST00000585839 ZNF326Q5BKZ1 582 aaKnown RBP26.34■■□□□ 1.81
PKN1-204ENST00000585839 ERICH3Q5RHP9 1530 aa26.33■■□□□ 1.81
PKN1-204ENST00000585839 IRX6P78412 446 aaPredicted RBP26.33■■□□□ 1.81
PKN1-204ENST00000585839 TONSLQ96HA7 1378 aa26.32■■□□□ 1.8
PKN1-204ENST00000585839 ANP32CO43423 234 aa26.31■■□□□ 1.8
PKN1-204ENST00000585839 CLSPNQ9HAW4 1339 aa26.31■■□□□ 1.8
PKN1-204ENST00000585839 RRBP1Q9P2E9 1410 aaKnown RBP26.29■■□□□ 1.8
PKN1-204ENST00000585839 ZNF777Q9ULD5 760 aaPredicted RBP26.28■■□□□ 1.8
PKN1-204ENST00000585839 BIVM-ERCC5R4GMW8 1640 aa26.27■■□□□ 1.8
PKN1-204ENST00000585839 NEFLP07196 543 aa26.26■■□□□ 1.79
PKN1-204ENST00000585839 HMGXB3Q12766 1538 aa26.25■■□□□ 1.79
PKN1-204ENST00000585839 LRRC9Q6ZRR7 1453 aa26.2■■□□□ 1.78
PKN1-204ENST00000585839 FHAD1B1AJZ9 1412 aa26.17■■□□□ 1.78
PKN1-204ENST00000585839 CC2D2AQ9P2K1 1620 aa26.15■■□□□ 1.78
PKN1-204ENST00000585839 PPP1R15AO75807 674 aaPredicted RBP26.14■■□□□ 1.78
PKN1-204ENST00000585839 HNRNPUQ00839 825 aaKnown RBP eCLIP26.13■■□□□ 1.77
PKN1-204ENST00000585839 POLA1P09884 1462 aaPredicted RBP26.07■■□□□ 1.76
PKN1-204ENST00000585839 WDR97A6NE52 1622 aa26.07■■□□□ 1.76
PKN1-204ENST00000585839 FAM9BQ8IZU0 186 aa26.06■■□□□ 1.76
PKN1-204ENST00000585839 TIAM1Q13009 1591 aa26.06■■□□□ 1.76
PKN1-204ENST00000585839 PCF11O94913 1555 aaKnown RBP26■■□□□ 1.75
PKN1-204ENST00000585839 TOPBP1Q92547 1522 aa25.99■■□□□ 1.75
PKN1-204ENST00000585839 MAPKBP1O60336 1514 aa25.98■■□□□ 1.75
PKN1-204ENST00000585839 ZNF644Q9H582 1327 aaPredicted RBP25.97■■□□□ 1.75
PKN1-204ENST00000585839 HSPA5P11021 654 aaKnown RBP25.94■■□□□ 1.74
PKN1-204ENST00000585839 AQRO60306 1485 aaKnown RBP eCLIP25.93■■□□□ 1.742e-6■■■■■ 29.1
PKN1-204ENST00000585839 TSHZ2Q9NRE2 1034 aa25.92■■□□□ 1.74
PKN1-204ENST00000585839 SLC4A1APQ9BWU0 796 aaKnown RBP25.91■■□□□ 1.74
PKN1-204ENST00000585839 FGD6Q6ZV73 1430 aa25.91■■□□□ 1.74
PKN1-204ENST00000585839 PTPRKQ15262 1439 aa25.89■■□□□ 1.73
PKN1-204ENST00000585839 FMN1Q68DA7 1419 aa25.87■■□□□ 1.73
PKN1-204ENST00000585839 CCDC18Q5T9S5 1454 aa25.87■■□□□ 1.73
PKN1-204ENST00000585839 KDM2AQ9Y2K7 1162 aa25.87■■□□□ 1.73
PKN1-204ENST00000585839 L3MBTL2Q969R5 705 aa25.86■■□□□ 1.73
PKN1-204ENST00000585839 GAPVD1Q14C86 1478 aa25.86■■□□□ 1.73
PKN1-204ENST00000585839 MPHOSPH9Q99550 1183 aa25.83■■□□□ 1.73
PKN1-204ENST00000585839 PDS5BQ9NTI5 1447 aa25.83■■□□□ 1.73
PKN1-204ENST00000585839 CASKIN1Q8WXD9 1431 aa25.82■■□□□ 1.72
PKN1-204ENST00000585839 CHMP7Q8WUX9 453 aaPredicted RBP25.82■■□□□ 1.72
PKN1-204ENST00000585839 SALL2Q9Y467 1007 aaPredicted RBP25.82■■□□□ 1.72
PKN1-204ENST00000585839 EIF4G2P78344 907 aaKnown RBP eCLIP25.81■■□□□ 1.72
PKN1-204ENST00000585839 CCDC184Q52MB2 194 aa25.81■■□□□ 1.72
PKN1-204ENST00000585839 URB2Q14146 1524 aaKnown RBP25.79■■□□□ 1.72
PKN1-204ENST00000585839 MRS2Q9HD23 443 aa25.79■■□□□ 1.72
PKN1-204ENST00000585839 NCOA2Q15596 1464 aa25.78■■□□□ 1.72
PKN1-204ENST00000585839 ABCA10Q8WWZ4 1543 aa25.74■■□□□ 1.71
PKN1-204ENST00000585839 CFDP1Q9UEE9 299 aaPredicted RBP25.73■■□□□ 1.71
PKN1-204ENST00000585839 DNMBPQ6XZF7 1577 aa25.72■■□□□ 1.71
PKN1-204ENST00000585839 FYCO1Q9BQS8 1478 aa25.71■■□□□ 1.71
PKN1-204ENST00000585839 C11orf95C9JLR9 678 aaPredicted RBP25.69■■□□□ 1.7
PKN1-204ENST00000585839 WASHC2AQ641Q2 1341 aa25.68■■□□□ 1.7
PKN1-204ENST00000585839 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.68■■□□□ 1.74e-7■□□□□ 9.3
PKN1-204ENST00000585839 MYOM3Q5VTT5 1437 aa25.68■■□□□ 1.7
PKN1-204ENST00000585839 CDK13Q14004 1512 aaKnown RBP25.66■■□□□ 1.7
PKN1-204ENST00000585839 NAIPQ13075 1403 aa25.65■■□□□ 1.7
PKN1-204ENST00000585839 CDK11AQ9UQ88 783 aaPredicted RBP25.64■■□□□ 1.7
PKN1-204ENST00000585839 TIMELESSQ9UNS1 1208 aa25.64■■□□□ 1.69
PKN1-204ENST00000585839 RGL3Q3MIN7 710 aa25.63■■□□□ 1.69
PKN1-204ENST00000585839 NBPF8Q3BBV2 869 aa25.62■■□□□ 1.69
PKN1-204ENST00000585839 UACAQ9BZF9 1416 aa25.61■■□□□ 1.69
PKN1-204ENST00000585839 CCER2I3L3R5 266 aa25.6■■□□□ 1.69
PKN1-204ENST00000585839 B4GALNT3Q6L9W6 998 aa25.58■■□□□ 1.69
PKN1-204ENST00000585839 PKD2Q13563 968 aa25.57■■□□□ 1.68
PKN1-204ENST00000585839 ERICH6Q7L0X2 663 aa25.56■■□□□ 1.68
PKN1-204ENST00000585839 HFM1A2PYH4 1435 aa25.55■■□□□ 1.68
PKN1-204ENST00000585839 RBM19Q9Y4C8 960 aaKnown RBP25.54■■□□□ 1.68
PKN1-204ENST00000585839 MYT1LQ9UL68 1186 aa25.54■■□□□ 1.68
PKN1-204ENST00000585839 MAP3K1Q13233 1512 aa25.51■■□□□ 1.67
PKN1-204ENST00000585839 SNAPC4Q5SXM2 1469 aa25.5■■□□□ 1.67
PKN1-204ENST00000585839 ZNF608Q9ULD9 1512 aaPredicted RBP25.5■■□□□ 1.67
PKN1-204ENST00000585839 EFCAB5A4FU69 1503 aa25.49■■□□□ 1.67
PKN1-204ENST00000585839 HNRNPMP52272 730 aaKnown RBP eCLIP25.48■■□□□ 1.67
PKN1-204ENST00000585839 PLEKHD1A6NEE1 506 aa25.45■■□□□ 1.66
PKN1-204ENST00000585839 ERCC6Q03468 1493 aa25.44■■□□□ 1.66
PKN1-204ENST00000585839 PRG4Q92954 1404 aaPredicted RBP25.43■■□□□ 1.66
PKN1-204ENST00000585839 DCAF11Q8TEB1 546 aa25.43■■□□□ 1.66
PKN1-204ENST00000585839 SENP3Q9H4L4 574 aaPredicted RBP25.43■■□□□ 1.66
PKN1-204ENST00000585839 PRDM2Q13029 1718 aa25.42■■□□□ 1.66
PKN1-204ENST00000585839 PRKRIP1Q9H875 184 aaPredicted RBP25.42■■□□□ 1.66
PKN1-204ENST00000585839 MAGI3Q5TCQ9 1506 aa25.42■■□□□ 1.66
PKN1-204ENST00000585839 TSPY4P0CV99 314 aa25.42■■□□□ 1.66
PKN1-204ENST00000585839 TSPY10P0CW01 314 aa25.42■■□□□ 1.66
PKN1-204ENST00000585839 CARD11Q9BXL7 1154 aa25.41■■□□□ 1.66
PKN1-204ENST00000585839 PTPN23Q9H3S7 1636 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms